RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 UBE2V1Q13404 147 aa10.44□□□□□ -0.74
MKS1-203ENST00000393120 PAPPA-AS1Q5QFB9 102 aa10.44□□□□□ -0.74
MKS1-203ENST00000393120 C11orf72Q8NBR9 251 aa10.44□□□□□ -0.74
MKS1-203ENST00000393120 SPXQ9BT56 116 aa10.44□□□□□ -0.74
MKS1-203ENST00000393120 TENM4Q6N022 2769 aa10.44□□□□□ -0.74
MKS1-203ENST00000393120 TRBV25-1A0A075B6N4 114 aa10.43□□□□□ -0.74
MKS1-203ENST00000393120 I3L3M4 83 aa10.43□□□□□ -0.74
MKS1-203ENST00000393120 HTN1P15515 57 aa10.43□□□□□ -0.74
MKS1-203ENST00000393120 PMVKQ15126 192 aa10.43□□□□□ -0.74
MKS1-203ENST00000393120 LINC01587Q99440 93 aa10.43□□□□□ -0.74
MKS1-203ENST00000393120 SORL1Q92673 2214 aa10.43□□□□□ -0.74
MKS1-203ENST00000393120 BEAN1Q3B7T3 259 aa10.43□□□□□ -0.74
MKS1-203ENST00000393120 OR11H12B2RN74 326 aa10.42□□□□□ -0.74
MKS1-203ENST00000393120 TTTY13Q9BZ97 58 aa10.42□□□□□ -0.74
MKS1-203ENST00000393120 CST9LQ9H4G1 147 aa10.42□□□□□ -0.74
MKS1-203ENST00000393120 MYO9AB2RTY4 2548 aa10.42□□□□□ -0.74
MKS1-203ENST00000393120 ZNF469Q96JG9 3925 aaPredicted RBP10.41□□□□□ -0.74
MKS1-203ENST00000393120 CHD6Q8TD26 2715 aa10.41□□□□□ -0.74
MKS1-203ENST00000393120 E9PLD3 99 aa10.41□□□□□ -0.74
MKS1-203ENST00000393120 H3BRM9 83 aa10.41□□□□□ -0.74
MKS1-203ENST00000393120 RPL39P62891 51 aaKnown RBP10.41□□□□□ -0.74
MKS1-203ENST00000393120 STHQ8IWL8 128 aa10.41□□□□□ -0.74
MKS1-203ENST00000393120 MAPKAPK5-AS1Q8N8E1 139 aa10.41□□□□□ -0.74
MKS1-203ENST00000393120 CHAC1Q9BUX1 264 aa10.41□□□□□ -0.74
MKS1-203ENST00000393120 RHODO00212 210 aa10.41□□□□□ -0.74
MKS1-203ENST00000393120 P0DMU3 169 aa10.41□□□□□ -0.74
MKS1-203ENST00000393120 FAM231AP0DMU4 169 aa10.41□□□□□ -0.74
MKS1-203ENST00000393120 FAM231CP0DMU5 169 aa10.41□□□□□ -0.74
MKS1-203ENST00000393120 TAL2Q16559 108 aa10.41□□□□□ -0.74
MKS1-203ENST00000393120 C20orf203Q8NBC4 194 aa10.41□□□□□ -0.74
MKS1-203ENST00000393120 FAM110AQ9BQ89 295 aa10.41□□□□□ -0.74
MKS1-203ENST00000393120 TLN2Q9Y4G6 2542 aa10.4□□□□□ -0.74
MKS1-203ENST00000393120 IGLV4-69A0A075B6H9 119 aa10.4□□□□□ -0.74
MKS1-203ENST00000393120 TRAV8-6A0A0B4J262 113 aa10.4□□□□□ -0.74
MKS1-203ENST00000393120 CCL25O15444 150 aa10.4□□□□□ -0.74
MKS1-203ENST00000393120 PTTG1IPP53801 180 aa10.4□□□□□ -0.74
MKS1-203ENST00000393120 CFAP126Q5VTH2 177 aa10.4□□□□□ -0.74
MKS1-203ENST00000393120 OR11H2Q8NH07 326 aa10.4□□□□□ -0.74
MKS1-203ENST00000393120 FLNAP21333 2647 aaKnown RBP10.4□□□□□ -0.74
MKS1-203ENST00000393120 CCDC168Q8NDH2 2452 aa10.39□□□□□ -0.75
MKS1-203ENST00000393120 PRM2P04554 102 aa10.39□□□□□ -0.75
MKS1-203ENST00000393120 PROK1P58294 105 aa10.39□□□□□ -0.75
MKS1-203ENST00000393120 VAMP3Q15836 100 aa10.39□□□□□ -0.75
MKS1-203ENST00000393120 TM2D2Q9BX73 214 aa10.39□□□□□ -0.75
MKS1-203ENST00000393120 SONP18583 2426 aaKnown RBP10.39□□□□□ -0.75
MKS1-203ENST00000393120 ADARB2-AS1A8MUL3 147 aa10.39□□□□□ -0.75
MKS1-203ENST00000393120 NBPF19A0A087WUL8 3843 aa10.38□□□□□ -0.75
MKS1-203ENST00000393120 MYMXA0A1B0GTQ4 84 aa10.38□□□□□ -0.75
MKS1-203ENST00000393120 RS1O15537 224 aa10.38□□□□□ -0.75
MKS1-203ENST00000393120 C1orf158Q8N1D5 194 aa10.38□□□□□ -0.75
MKS1-203ENST00000393120 XCL2Q9UBD3 114 aa10.38□□□□□ -0.75
MKS1-203ENST00000393120 C9orf118A6NHY6 69 aa10.37□□□□□ -0.75
MKS1-203ENST00000393120 C11orf86A6NJI1 115 aa10.37□□□□□ -0.75
MKS1-203ENST00000393120 IGLV1-51P01701 117 aa10.37□□□□□ -0.75
MKS1-203ENST00000393120 IL17DQ8TAD2 202 aa10.37□□□□□ -0.75
MKS1-203ENST00000393120 DNAJC30Q96LL9 226 aa10.37□□□□□ -0.75
MKS1-203ENST00000393120 PYGO1Q9Y3Y4 419 aa10.37□□□□□ -0.75
MKS1-203ENST00000393120 TNFRSF18Q9Y5U5 241 aa10.37□□□□□ -0.75
MKS1-203ENST00000393120 IGHV3-53P01767 116 aa10.37□□□□□ -0.75
MKS1-203ENST00000393120 DEFB104AQ8WTQ1 72 aa10.37□□□□□ -0.75
MKS1-203ENST00000393120 PRADC1Q9BSG0 188 aa10.37□□□□□ -0.75
MKS1-203ENST00000393120 IGHV3-73A0A0B4J1V6 119 aa10.36□□□□□ -0.75
MKS1-203ENST00000393120 SAP30O75446 220 aa10.36□□□□□ -0.75
MKS1-203ENST00000393120 Q6ZSN1 163 aa10.36□□□□□ -0.75
MKS1-203ENST00000393120 NFE4Q86UQ8 179 aa10.36□□□□□ -0.75
MKS1-203ENST00000393120 CEND1Q8N111 149 aa10.36□□□□□ -0.75
MKS1-203ENST00000393120 GCSHP23434 173 aa10.35□□□□□ -0.75
MKS1-203ENST00000393120 CRYBA4P53673 196 aa10.35□□□□□ -0.75
MKS1-203ENST00000393120 HERVK_113P61574 105 aa10.35□□□□□ -0.75
MKS1-203ENST00000393120 AMMECR1LQ6DCA0 310 aa10.35□□□□□ -0.75
MKS1-203ENST00000393120 AZU1P20160 251 aa10.35□□□□□ -0.75
MKS1-203ENST00000393120 FXYD2P54710 66 aa10.35□□□□□ -0.75
MKS1-203ENST00000393120 MRPL16Q9NX20 251 aaKnown RBP10.35□□□□□ -0.75
MKS1-203ENST00000393120 SMIM13P0DJ93 91 aa10.34□□□□□ -0.75
MKS1-203ENST00000393120 RNASE8Q8TDE3 154 aaKnown RBP10.34□□□□□ -0.75
MKS1-203ENST00000393120 ZNRF2Q8NHG8 242 aa10.33□□□□□ -0.76
MKS1-203ENST00000393120 SMR3AQ99954 134 aa10.33□□□□□ -0.76
MKS1-203ENST00000393120 C19orf73Q9NVV2 129 aa10.33□□□□□ -0.76
MKS1-203ENST00000393120 IGLV4-3A0A075B6K6 122 aa10.33□□□□□ -0.76
MKS1-203ENST00000393120 LY6G6DO95868 133 aa10.33□□□□□ -0.76
MKS1-203ENST00000393120 NDUFA11Q86Y39 141 aa10.33□□□□□ -0.76
MKS1-203ENST00000393120 TRBV7-3A0A075B6L6 115 aa10.32□□□□□ -0.76
MKS1-203ENST00000393120 GIG44P09565 113 aaPredicted RBP10.32□□□□□ -0.76
MKS1-203ENST00000393120 OR4C5Q8NGB2 326 aa10.32□□□□□ -0.76
MKS1-203ENST00000393120 TMEM263Q8WUH6 116 aaKnown RBP10.32□□□□□ -0.76
MKS1-203ENST00000393120 VCX2Q9H322 139 aa10.32□□□□□ -0.76
MKS1-203ENST00000393120 HELZ2Q9BYK8 2649 aaKnown RBP10.31□□□□□ -0.76
MKS1-203ENST00000393120 UNC79Q9P2D8 2635 aa10.31□□□□□ -0.76
MKS1-203ENST00000393120 AMELXQ99217 191 aa10.31□□□□□ -0.76
MKS1-203ENST00000393120 HIST1H4GQ99525 98 aa10.31□□□□□ -0.76
MKS1-203ENST00000393120 OPRPNQ99935 248 aaPredicted RBP10.31□□□□□ -0.76
MKS1-203ENST00000393120 AKAP9Q99996 3911 aa10.31□□□□□ -0.76
MKS1-203ENST00000393120 ZNF815PA8K554 130 aa10.31□□□□□ -0.76
MKS1-203ENST00000393120 EMP1P54849 157 aa10.31□□□□□ -0.76
MKS1-203ENST00000393120 TMEM170BQ5T4T1 132 aa10.31□□□□□ -0.76
MKS1-203ENST00000393120 PHLDA1Q8WV24 401 aaPredicted RBP10.31□□□□□ -0.76
MKS1-203ENST00000393120 CHCHD7Q9BUK0 85 aa10.31□□□□□ -0.76
MKS1-203ENST00000393120 SPANXA1Q9NS26 97 aa10.31□□□□□ -0.76
MKS1-203ENST00000393120 Q9UF83 564 aa10.31□□□□□ -0.76
MKS1-203ENST00000393120 K7EP13 123 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms