RNA–Protein interactions for RNA: ENST00000384433.1

RNU6-549P-201, Transcript of RNA, U6 small nuclear 549, pseudogene, humanhuman

BASIC

Gene RNU6-549P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-549P-201ENST00000384433 GOLGA3Q08378 1498 aa0.23□□□□□ -2.37
RNU6-549P-201ENST00000384433 NDUFA2O43678 99 aa0.23□□□□□ -2.37
RNU6-549P-201ENST00000384433 APODP05090 189 aa0.23□□□□□ -2.37
RNU6-549P-201ENST00000384433 HIST1H1DP16402 221 aaKnown RBP0.23□□□□□ -2.37
RNU6-549P-201ENST00000384433 CBLN1P23435 193 aa0.23□□□□□ -2.37
RNU6-549P-201ENST00000384433 FAM107BQ9H098 131 aa0.23□□□□□ -2.37
RNU6-549P-201ENST00000384433 DSTQ03001 7570 aaKnown RBP0.23□□□□□ -2.37
RNU6-549P-201ENST00000384433 LAMC3Q9Y6N6 1575 aa0.23□□□□□ -2.37
RNU6-549P-201ENST00000384433 DAPK1P53355 1430 aa0.22□□□□□ -2.37
RNU6-549P-201ENST00000384433 KIAA0100Q14667 2235 aaKnown RBP0.22□□□□□ -2.37
RNU6-549P-201ENST00000384433 TMEM14DPA8MWL7 114 aa0.22□□□□□ -2.37
RNU6-549P-201ENST00000384433 ARPC4P59998 168 aa0.22□□□□□ -2.37
RNU6-549P-201ENST00000384433 TCEAL4Q96EI5 215 aa0.22□□□□□ -2.37
RNU6-549P-201ENST00000384433 ZFYVE26Q68DK2 2539 aa0.22□□□□□ -2.37
RNU6-549P-201ENST00000384433 GRIN2AQ12879 1464 aa0.22□□□□□ -2.37
RNU6-549P-201ENST00000384433 IFNA17P01571 189 aa0.21□□□□□ -2.38
RNU6-549P-201ENST00000384433 WFDC6Q9BQY6 131 aa0.21□□□□□ -2.38
RNU6-549P-201ENST00000384433 CASKIN1Q8WXD9 1431 aa0.21□□□□□ -2.38
RNU6-549P-201ENST00000384433 ARFGEF1Q9Y6D6 1849 aa0.2□□□□□ -2.38
RNU6-549P-201ENST00000384433 UNC13BO14795 1591 aa0.2□□□□□ -2.38
RNU6-549P-201ENST00000384433 ZMYM4Q5VZL5 1548 aa0.2□□□□□ -2.38
RNU6-549P-201ENST00000384433 G3V318 75 aa0.2□□□□□ -2.38
RNU6-549P-201ENST00000384433 GNG7O60262 68 aa0.2□□□□□ -2.38
RNU6-549P-201ENST00000384433 INSL4Q14641 139 aa0.2□□□□□ -2.38
RNU6-549P-201ENST00000384433 PDCD10Q9BUL8 212 aa0.2□□□□□ -2.38
RNU6-549P-201ENST00000384433 SEC11CQ9BY50 192 aa0.2□□□□□ -2.38
RNU6-549P-201ENST00000384433 LINC00312Q9Y6C7 94 aa0.2□□□□□ -2.38
RNU6-549P-201ENST00000384433 MAST4O15021 2626 aa0.19□□□□□ -2.38
RNU6-549P-201ENST00000384433 TRAV1-2A0A0B4J238 106 aa0.19□□□□□ -2.38
RNU6-549P-201ENST00000384433 APOC4-APOC2K7ER74 178 aa0.19□□□□□ -2.38
RNU6-549P-201ENST00000384433 GCHFRP30047 84 aa0.19□□□□□ -2.38
RNU6-549P-201ENST00000384433 COX6A2Q02221 97 aa0.19□□□□□ -2.38
RNU6-549P-201ENST00000384433 LSM10Q969L4 123 aaKnown RBP0.19□□□□□ -2.38
RNU6-549P-201ENST00000384433 ZNF518AQ6AHZ1 1483 aa0.18□□□□□ -2.38
RNU6-549P-201ENST00000384433 TRBV10-3A0A0K0K1G6 114 aa0.18□□□□□ -2.38
RNU6-549P-201ENST00000384433 CCDC58Q4VC31 144 aa0.18□□□□□ -2.38
RNU6-549P-201ENST00000384433 ZNF818PQ6ZRF7 136 aa0.18□□□□□ -2.38
RNU6-549P-201ENST00000384433 CCDC167Q9P0B6 97 aa0.18□□□□□ -2.38
RNU6-549P-201ENST00000384433 S100A12P80511 92 aa0.17□□□□□ -2.38
RNU6-549P-201ENST00000384433 RBM3P98179 157 aaKnown RBP0.17□□□□□ -2.38
RNU6-549P-201ENST00000384433 LINC00470Q9BZP3 86 aa0.17□□□□□ -2.38
RNU6-549P-201ENST00000384433 FAM92AA1XBS5 289 aa0.16□□□□□ -2.38
RNU6-549P-201ENST00000384433 CCL8P80075 99 aa0.16□□□□□ -2.38
RNU6-549P-201ENST00000384433 Q5BKY6 102 aa0.16□□□□□ -2.38
RNU6-549P-201ENST00000384433 AGPAT4-IT1Q9H0P7 198 aa0.16□□□□□ -2.38
RNU6-549P-201ENST00000384433 PAIP2BQ9ULR5 123 aaKnown RBP0.16□□□□□ -2.38
RNU6-549P-201ENST00000384433 MYO7AQ13402 2215 aa0.15□□□□□ -2.38
RNU6-549P-201ENST00000384433 SIPA1L3O60292 1781 aaPredicted RBP0.15□□□□□ -2.39
RNU6-549P-201ENST00000384433 ARL11Q969Q4 196 aa0.15□□□□□ -2.39
RNU6-549P-201ENST00000384433 CADP27708 2225 aa0.15□□□□□ -2.39
RNU6-549P-201ENST00000384433 PHLPP1O60346 1717 aa0.15□□□□□ -2.39
RNU6-549P-201ENST00000384433 NEBP20929 6669 aa0.15□□□□□ -2.39
RNU6-549P-201ENST00000384433 IFT140Q96RY7 1462 aa0.15□□□□□ -2.39
RNU6-549P-201ENST00000384433 HCG22E2RYF7 251 aa0.14□□□□□ -2.39
RNU6-549P-201ENST00000384433 Q8N8P6 123 aa0.14□□□□□ -2.39
RNU6-549P-201ENST00000384433 PARP14Q460N5 1801 aa0.14□□□□□ -2.39
RNU6-549P-201ENST00000384433 SPEF2Q9C093 1822 aa0.13□□□□□ -2.39
RNU6-549P-201ENST00000384433 FAM25AB3EWG3 89 aa0.13□□□□□ -2.39
RNU6-549P-201ENST00000384433 FAM25CB3EWG5 89 aa0.13□□□□□ -2.39
RNU6-549P-201ENST00000384433 FAM25GB3EWG6 89 aa0.13□□□□□ -2.39
RNU6-549P-201ENST00000384433 SSBP3-AS1Q7Z2R9 100 aa0.13□□□□□ -2.39
RNU6-549P-201ENST00000384433 SCP2D1Q9UJQ7 156 aa0.13□□□□□ -2.39
RNU6-549P-201ENST00000384433 LOC100130705A0A1B0GUX0 176 aa0.12□□□□□ -2.39
RNU6-549P-201ENST00000384433 ZNF815PA8K554 130 aa0.12□□□□□ -2.39
RNU6-549P-201ENST00000384433 SPINK1P00995 79 aa0.12□□□□□ -2.39
RNU6-549P-201ENST00000384433 HMGN1P05114 100 aa0.12□□□□□ -2.39
RNU6-549P-201ENST00000384433 SELENOWP63302 87 aa0.12□□□□□ -2.39
RNU6-549P-201ENST00000384433 MEIG1Q5JSS6 88 aa0.12□□□□□ -2.39
RNU6-549P-201ENST00000384433 OTOGQ6ZRI0 2925 aa0.11□□□□□ -2.39
RNU6-549P-201ENST00000384433 F8P00451 2351 aa0.11□□□□□ -2.39
RNU6-549P-201ENST00000384433 CFTRP13569 1480 aa0.11□□□□□ -2.39
RNU6-549P-201ENST00000384433 DOCK11Q5JSL3 2073 aa0.11□□□□□ -2.39
RNU6-549P-201ENST00000384433 TRAV13-2A0A0B4J235 113 aa0.11□□□□□ -2.39
RNU6-549P-201ENST00000384433 SIX6O95475 246 aa0.11□□□□□ -2.39
RNU6-549P-201ENST00000384433 UBE2DNLQ8IWF7 75 aa0.11□□□□□ -2.39
RNU6-549P-201ENST00000384433 TSC22D3Q99576 134 aa0.11□□□□□ -2.39
RNU6-549P-201ENST00000384433 SERP1Q9Y6X1 66 aa0.11□□□□□ -2.39
RNU6-549P-201ENST00000384433 IGF2RP11717 2491 aa0.11□□□□□ -2.39
RNU6-549P-201ENST00000384433 MBD5Q9P267 1494 aa0.1□□□□□ -2.39
RNU6-549P-201ENST00000384433 IFT172Q9UG01 1749 aa0.1□□□□□ -2.39
RNU6-549P-201ENST00000384433 K7EP13 123 aa0.1□□□□□ -2.39
RNU6-549P-201ENST00000384433 CCL18P55774 89 aa0.1□□□□□ -2.39
RNU6-549P-201ENST00000384433 BAGE3Q86Y29 109 aa0.1□□□□□ -2.39
RNU6-549P-201ENST00000384433 SNRNP25Q9BV90 132 aaKnown RBP0.1□□□□□ -2.39
RNU6-549P-201ENST00000384433 CELSR2Q9HCU4 2923 aa0.1□□□□□ -2.39
RNU6-549P-201ENST00000384433 LRRC37A3O60309 1634 aa0.09□□□□□ -2.39
RNU6-549P-201ENST00000384433 PTPRZ1P23471 2315 aaPredicted RBP0.09□□□□□ -2.39
RNU6-549P-201ENST00000384433 SPAARA0A1B0GVQ0 90 aa0.09□□□□□ -2.4
RNU6-549P-201ENST00000384433 PPP1R17O96001 155 aa0.09□□□□□ -2.4
RNU6-549P-201ENST00000384433 CFAP126Q5VTH2 177 aa0.09□□□□□ -2.4
RNU6-549P-201ENST00000384433 Q6AWC8 147 aa0.09□□□□□ -2.4
RNU6-549P-201ENST00000384433 RERGLQ9H628 205 aa0.09□□□□□ -2.4
RNU6-549P-201ENST00000384433 Q5VV11 94 aa0.08□□□□□ -2.4
RNU6-549P-201ENST00000384433 FAM213BQ8TBF2 198 aa0.08□□□□□ -2.4
RNU6-549P-201ENST00000384433 MRC1P22897 1456 aa0.08□□□□□ -2.4
RNU6-549P-201ENST00000384433 HRNRQ86YZ3 2850 aaPredicted RBP0.07□□□□□ -2.4
RNU6-549P-201ENST00000384433 C10orf128Q5T292 105 aa0.07□□□□□ -2.4
RNU6-549P-201ENST00000384433 MUC12Q9UKN1 5478 aa0.07□□□□□ -2.4
RNU6-549P-201ENST00000384433 ARAP2Q8WZ64 1704 aa0.07□□□□□ -2.4
RNU6-549P-201ENST00000384433 NCOR2Q9Y618 2525 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms