RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 A0A087WW49 117 aa14.44□□□□□ -0.1
CSPG5-202ENST00000383738 IGHV7-4-1A0A0J9YVY3 117 aa14.44□□□□□ -0.1
CSPG5-202ENST00000383738 RAI1Q7Z5J4 1906 aaPredicted RBP14.44□□□□□ -0.1
CSPG5-202ENST00000383738 LINC00574Q9H8X3 128 aa14.44□□□□□ -0.1
CSPG5-202ENST00000383738 GAGE5Q13069 117 aa14.43□□□□□ -0.1
CSPG5-202ENST00000383738 GAGE6Q13070 117 aa14.43□□□□□ -0.1
CSPG5-202ENST00000383738 C15orf53Q8NAA6 179 aa14.43□□□□□ -0.1
CSPG5-202ENST00000383738 RPL39P62891 51 aaKnown RBP14.43□□□□□ -0.1
CSPG5-202ENST00000383738 TRPT1Q86TN4 253 aaKnown RBP14.43□□□□□ -0.1
CSPG5-202ENST00000383738 ODF3BA8MYP8 253 aa14.42□□□□□ -0.1
CSPG5-202ENST00000383738 GAGE12JA6NER3 117 aa14.42□□□□□ -0.1
CSPG5-202ENST00000383738 GAGE7O76087 117 aa14.42□□□□□ -0.1
CSPG5-202ENST00000383738 GAGE12FP0CL80 117 aa14.42□□□□□ -0.1
CSPG5-202ENST00000383738 GAGE12GP0CL81 117 aa14.42□□□□□ -0.1
CSPG5-202ENST00000383738 GAGE12IP0CL82 117 aa14.42□□□□□ -0.1
CSPG5-202ENST00000383738 IGHV4-31P0DP07 118 aa14.42□□□□□ -0.1
CSPG5-202ENST00000383738 GAGE4Q13068 117 aa14.42□□□□□ -0.1
CSPG5-202ENST00000383738 SDHAF1A6NFY7 115 aa14.42□□□□□ -0.1
CSPG5-202ENST00000383738 CCL24O00175 119 aa14.42□□□□□ -0.1
CSPG5-202ENST00000383738 ELANEP08246 267 aa14.42□□□□□ -0.1
CSPG5-202ENST00000383738 ANKRD29Q8N6D5 301 aa14.41□□□□□ -0.1
CSPG5-202ENST00000383738 BUB3O43684 328 aa14.41□□□□□ -0.1
CSPG5-202ENST00000383738 ATXN8Q156A1 80 aa14.41□□□□□ -0.1
CSPG5-202ENST00000383738 C19orf54Q5BKX5 351 aa14.41□□□□□ -0.1
CSPG5-202ENST00000383738 CITED1Q99966 193 aa14.41□□□□□ -0.1
CSPG5-202ENST00000383738 IFITM1P13164 125 aa14.4□□□□□ -0.1
CSPG5-202ENST00000383738 EDA2RQ9HAV5 297 aa14.4□□□□□ -0.1
CSPG5-202ENST00000383738 INAFM1C9JVW0 142 aa14.4□□□□□ -0.1
CSPG5-202ENST00000383738 VCYO14598 125 aa14.4□□□□□ -0.1
CSPG5-202ENST00000383738 A4D1N5 150 aa14.39□□□□□ -0.11
CSPG5-202ENST00000383738 J3QQQ9 107 aa14.39□□□□□ -0.11
CSPG5-202ENST00000383738 IGHG2P01859 326 aa14.39□□□□□ -0.11
CSPG5-202ENST00000383738 LINC01559Q495D7 138 aa14.39□□□□□ -0.11
CSPG5-202ENST00000383738 CITED2Q99967 270 aaPredicted RBP14.39□□□□□ -0.11
CSPG5-202ENST00000383738 PMVKQ15126 192 aa14.38□□□□□ -0.11
CSPG5-202ENST00000383738 TEN1Q86WV5 123 aa14.38□□□□□ -0.11
CSPG5-202ENST00000383738 H3BMM0 161 aa14.37□□□□□ -0.11
CSPG5-202ENST00000383738 UBE2WQ96B02 151 aa14.37□□□□□ -0.11
CSPG5-202ENST00000383738 PLEKHB2Q96CS7 222 aa14.37□□□□□ -0.11
CSPG5-202ENST00000383738 OPRPNQ99935 248 aaPredicted RBP14.37□□□□□ -0.11
CSPG5-202ENST00000383738 E9PLD3 99 aa14.37□□□□□ -0.11
CSPG5-202ENST00000383738 UFSP1Q6NVU6 142 aa14.37□□□□□ -0.11
CSPG5-202ENST00000383738 KALRNO60229 2985 aa14.37□□□□□ -0.11
CSPG5-202ENST00000383738 CRYGCP07315 174 aa14.37□□□□□ -0.11
CSPG5-202ENST00000383738 TRBV7-9A0A0J9YWB2 115 aa14.37□□□□□ -0.11
CSPG5-202ENST00000383738 Q6ZUT4 128 aa14.37□□□□□ -0.11
CSPG5-202ENST00000383738 CCDC140Q96MF4 163 aa14.37□□□□□ -0.11
CSPG5-202ENST00000383738 TNRC6BQ9UPQ9 1833 aaKnown RBP14.36□□□□□ -0.11
CSPG5-202ENST00000383738 RBAKDNA6NC62 111 aa14.36□□□□□ -0.11
CSPG5-202ENST00000383738 A6NDX4 124 aa14.36□□□□□ -0.11
CSPG5-202ENST00000383738 TAL2Q16559 108 aa14.36□□□□□ -0.11
CSPG5-202ENST00000383738 LGALS1P09382 135 aaKnown RBP14.36□□□□□ -0.11
CSPG5-202ENST00000383738 JPT2Q9H910 190 aa14.36□□□□□ -0.11
CSPG5-202ENST00000383738 DNAJC9-AS1A6NH13 148 aa14.36□□□□□ -0.11
CSPG5-202ENST00000383738 TIMM21Q9BVV7 248 aa14.36□□□□□ -0.11
CSPG5-202ENST00000383738 IGHV3-38A0A0C4DH36 116 aa14.35□□□□□ -0.11
CSPG5-202ENST00000383738 LY6LH3BQJ8 138 aa14.35□□□□□ -0.11
CSPG5-202ENST00000383738 IGLV2-11P01706 119 aa14.35□□□□□ -0.11
CSPG5-202ENST00000383738 MYCNOSP40205 109 aa14.35□□□□□ -0.11
CSPG5-202ENST00000383738 DAND5Q8N907 189 aa14.35□□□□□ -0.11
CSPG5-202ENST00000383738 HIGD1BQ9P298 99 aa14.35□□□□□ -0.11
CSPG5-202ENST00000383738 ZNF415Q09FC8 603 aa14.35□□□□□ -0.11
CSPG5-202ENST00000383738 C9orf153Q5TBE3 101 aa14.35□□□□□ -0.11
CSPG5-202ENST00000383738 TMEM190Q8WZ59 177 aa14.34□□□□□ -0.11
CSPG5-202ENST00000383738 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.34□□□□□ -0.11
CSPG5-202ENST00000383738 C11orf86A6NJI1 115 aa14.34□□□□□ -0.11
CSPG5-202ENST00000383738 TNFRSF13BO14836 293 aaPredicted RBP14.34□□□□□ -0.11
CSPG5-202ENST00000383738 TCL1BO95988 128 aa14.34□□□□□ -0.11
CSPG5-202ENST00000383738 PLA2G2AP14555 144 aa14.34□□□□□ -0.11
CSPG5-202ENST00000383738 CHCHD5Q9BSY4 110 aa14.34□□□□□ -0.11
CSPG5-202ENST00000383738 C11orf68Q9H3H3 251 aaKnown RBP14.34□□□□□ -0.11
CSPG5-202ENST00000383738 TRAV13-1A0A0B4J241 112 aa14.34□□□□□ -0.11
CSPG5-202ENST00000383738 CFC1BP0CG36 223 aa14.34□□□□□ -0.11
CSPG5-202ENST00000383738 CFC1P0CG37 223 aa14.34□□□□□ -0.11
CSPG5-202ENST00000383738 GAGE2AQ6NT46 116 aa14.34□□□□□ -0.11
CSPG5-202ENST00000383738 Q6ZQT7 251 aa14.34□□□□□ -0.11
CSPG5-202ENST00000383738 TRGV11A0A075B6L2 103 aa14.33□□□□□ -0.12
CSPG5-202ENST00000383738 A0A096LPF7 62 aa14.33□□□□□ -0.12
CSPG5-202ENST00000383738 C16orf54Q6UWD8 224 aa14.33□□□□□ -0.12
CSPG5-202ENST00000383738 IGF1P05019 195 aa14.33□□□□□ -0.12
CSPG5-202ENST00000383738 MRAPQ8TCY5 172 aa14.33□□□□□ -0.12
CSPG5-202ENST00000383738 ZNF493Q6ZR52 646 aa14.33□□□□□ -0.12
CSPG5-202ENST00000383738 WDFY3Q8IZQ1 3526 aa14.32□□□□□ -0.12
CSPG5-202ENST00000383738 HERV-K104P63124 156 aa14.32□□□□□ -0.12
CSPG5-202ENST00000383738 GCN1Q92616 2671 aaKnown RBP14.32□□□□□ -0.12
CSPG5-202ENST00000383738 INSP01308 110 aa14.32□□□□□ -0.12
CSPG5-202ENST00000383738 CARD19Q96LW7 228 aa14.32□□□□□ -0.12
CSPG5-202ENST00000383738 A0A0J9YXV3 536 aa14.31□□□□□ -0.12
CSPG5-202ENST00000383738 MRPL23Q16540 153 aaKnown RBP14.31□□□□□ -0.12
CSPG5-202ENST00000383738 TMEM61Q8N0U2 210 aa14.31□□□□□ -0.12
CSPG5-202ENST00000383738 XGP55808 180 aa14.31□□□□□ -0.12
CSPG5-202ENST00000383738 HIST1H4AP62805 103 aaKnown RBP14.31□□□□□ -0.12
CSPG5-202ENST00000383738 MUSTN1Q8IVN3 82 aa14.3□□□□□ -0.12
CSPG5-202ENST00000383738 A0A096LNJ9 63 aa14.3□□□□□ -0.12
CSPG5-202ENST00000383738 ESM1Q9NQ30 184 aa14.3□□□□□ -0.12
CSPG5-202ENST00000383738 BAALCQ8WXS3 180 aa14.3□□□□□ -0.12
CSPG5-202ENST00000383738 C18orf65Q6ZTR6 163 aa14.29□□□□□ -0.12
CSPG5-202ENST00000383738 TM2D2Q9BX73 214 aa14.29□□□□□ -0.12
CSPG5-202ENST00000383738 CRYGBP07316 175 aa14.28□□□□□ -0.12
CSPG5-202ENST00000383738 NDUFA12Q9UI09 145 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms