RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 SH2D6Q7Z4S9 175 aa10.69□□□□□ -0.7
PDGFB-202ENST00000381551 AMN1Q8IY45 258 aa10.69□□□□□ -0.7
PDGFB-202ENST00000381551 NEXN-AS1Q8NBZ9 246 aa10.69□□□□□ -0.7
PDGFB-202ENST00000381551 ZNRF2Q8NHG8 242 aa10.69□□□□□ -0.7
PDGFB-202ENST00000381551 FRZBQ92765 325 aa10.69□□□□□ -0.7
PDGFB-202ENST00000381551 RYR3Q15413 4870 aa10.68□□□□□ -0.7
PDGFB-202ENST00000381551 HYDINQ4G0P3 5121 aa10.68□□□□□ -0.7
PDGFB-202ENST00000381551 TRBV7-3A0A075B6L6 115 aa10.68□□□□□ -0.7
PDGFB-202ENST00000381551 S100PP25815 95 aa10.68□□□□□ -0.7
PDGFB-202ENST00000381551 CCL18P55774 89 aa10.68□□□□□ -0.7
PDGFB-202ENST00000381551 RPL36AP83881 106 aaKnown RBP10.68□□□□□ -0.7
PDGFB-202ENST00000381551 FAM104BQ5XKR9 115 aa10.68□□□□□ -0.7
PDGFB-202ENST00000381551 RASL11AQ6T310 242 aa10.68□□□□□ -0.7
PDGFB-202ENST00000381551 RPL36ALQ969Q0 106 aaKnown RBP10.68□□□□□ -0.7
PDGFB-202ENST00000381551 URGCP-MRPS24S4R325 110 aa10.68□□□□□ -0.7
PDGFB-202ENST00000381551 TRAV26-2A0A0B4J265 109 aa10.67□□□□□ -0.7
PDGFB-202ENST00000381551 UBE2D3P61077 147 aa10.67□□□□□ -0.7
PDGFB-202ENST00000381551 UBE2D2P62837 147 aa10.67□□□□□ -0.7
PDGFB-202ENST00000381551 ATP6V0E2Q8NHE4 81 aa10.67□□□□□ -0.7
PDGFB-202ENST00000381551 LINC00476Q8WZB0 136 aa10.67□□□□□ -0.7
PDGFB-202ENST00000381551 DNAJC30Q96LL9 226 aa10.67□□□□□ -0.7
PDGFB-202ENST00000381551 NIT2Q9NQR4 276 aa10.67□□□□□ -0.7
PDGFB-202ENST00000381551 LINC00588Q9Y4M8 146 aa10.67□□□□□ -0.7
PDGFB-202ENST00000381551 GAS8-AS1O95177 125 aa10.66□□□□□ -0.7
PDGFB-202ENST00000381551 LCE6AA0A183 80 aa10.65□□□□□ -0.7
PDGFB-202ENST00000381551 LY6G6CO95867 125 aa10.65□□□□□ -0.7
PDGFB-202ENST00000381551 TIRAPP58753 221 aa10.65□□□□□ -0.7
PDGFB-202ENST00000381551 MRPL51Q4U2R6 128 aaKnown RBP10.65□□□□□ -0.7
PDGFB-202ENST00000381551 MRAP2Q96G30 205 aa10.65□□□□□ -0.7
PDGFB-202ENST00000381551 GTSF1LQ9H1H1 148 aa10.65□□□□□ -0.7
PDGFB-202ENST00000381551 TNFRSF18Q9Y5U5 241 aa10.65□□□□□ -0.7
PDGFB-202ENST00000381551 RYR2Q92736 4967 aa10.64□□□□□ -0.71
PDGFB-202ENST00000381551 ELOBQ15370 118 aa10.64□□□□□ -0.71
PDGFB-202ENST00000381551 UBE2DNLQ8IWF7 75 aa10.64□□□□□ -0.71
PDGFB-202ENST00000381551 RPL39LQ96EH5 51 aaKnown RBP10.64□□□□□ -0.71
PDGFB-202ENST00000381551 MRPS16Q9Y3D3 137 aaKnown RBP10.63□□□□□ -0.71
PDGFB-202ENST00000381551 SMKR1H3BMG3 65 aa10.62□□□□□ -0.71
PDGFB-202ENST00000381551 RPS10P46783 165 aaKnown RBP10.62□□□□□ -0.71
PDGFB-202ENST00000381551 TMEM136Q6ZRR5 245 aa10.62□□□□□ -0.71
PDGFB-202ENST00000381551 DAZ4Q86SG3 579 aaKnown RBP10.62□□□□□ -0.71
PDGFB-202ENST00000381551 UPK3BQ9BT76 320 aa10.62□□□□□ -0.71
PDGFB-202ENST00000381551 DAZ3Q9NR90 486 aaKnown RBP10.62□□□□□ -0.71
PDGFB-202ENST00000381551 TRBV24-1A0A075B6N3 115 aa10.61□□□□□ -0.71
PDGFB-202ENST00000381551 TGIF2-C20orf24A0A0A6YYL0 155 aa10.61□□□□□ -0.71
PDGFB-202ENST00000381551 IGHV3-38A0A0C4DH36 116 aa10.61□□□□□ -0.71
PDGFB-202ENST00000381551 TRBV6-5A0A0K0K1A5 114 aa10.61□□□□□ -0.71
PDGFB-202ENST00000381551 CKS2P33552 79 aa10.61□□□□□ -0.71
PDGFB-202ENST00000381551 NRACQ8N912 160 aa10.61□□□□□ -0.71
PDGFB-202ENST00000381551 YPEL4Q96NS1 127 aa10.61□□□□□ -0.71
PDGFB-202ENST00000381551 SMCO4Q9NRQ5 59 aa10.61□□□□□ -0.71
PDGFB-202ENST00000381551 NCR2O95944 276 aa10.6□□□□□ -0.71
PDGFB-202ENST00000381551 PPP1R17O96001 155 aa10.6□□□□□ -0.71
PDGFB-202ENST00000381551 PPBPP02775 128 aa10.6□□□□□ -0.71
PDGFB-202ENST00000381551 COX19Q49B96 90 aa10.6□□□□□ -0.71
PDGFB-202ENST00000381551 OR10J3Q5JRS4 329 aa10.6□□□□□ -0.71
PDGFB-202ENST00000381551 LELP1Q5T871 98 aa10.6□□□□□ -0.71
PDGFB-202ENST00000381551 GNB1LQ9BYB4 327 aa10.6□□□□□ -0.71
PDGFB-202ENST00000381551 KMT2AQ03164 3969 aa10.59□□□□□ -0.71
PDGFB-202ENST00000381551 D6R8Y8 96 aa10.59□□□□□ -0.71
PDGFB-202ENST00000381551 CBLN2Q8IUK8 224 aa10.59□□□□□ -0.71
PDGFB-202ENST00000381551 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.59□□□□□ -0.71
PDGFB-202ENST00000381551 Q9H8V8 135 aa10.59□□□□□ -0.71
PDGFB-202ENST00000381551 ST20Q9HBF5 79 aa10.59□□□□□ -0.71
PDGFB-202ENST00000381551 DNAH6Q9C0G6 4158 aa10.59□□□□□ -0.71
PDGFB-202ENST00000381551 SDHAF1A6NFY7 115 aa10.58□□□□□ -0.72
PDGFB-202ENST00000381551 POLR2KP53803 58 aaKnown RBP10.58□□□□□ -0.72
PDGFB-202ENST00000381551 NTM-AS1Q6ZSK4 140 aa10.58□□□□□ -0.72
PDGFB-202ENST00000381551 TRBV6-8A0A0A6YYG3 113 aa10.57□□□□□ -0.72
PDGFB-202ENST00000381551 TRAV8-6A0A0B4J262 113 aa10.57□□□□□ -0.72
PDGFB-202ENST00000381551 TNFRSF6BO95407 300 aa10.57□□□□□ -0.72
PDGFB-202ENST00000381551 HLA-DQA1P01909 254 aa10.57□□□□□ -0.72
PDGFB-202ENST00000381551 APCSP02743 223 aa10.57□□□□□ -0.72
PDGFB-202ENST00000381551 TMEM97Q5BJF2 176 aa10.57□□□□□ -0.72
PDGFB-202ENST00000381551 ORMDL3Q8N138 153 aa10.57□□□□□ -0.72
PDGFB-202ENST00000381551 C20orf78Q9BR46 151 aa10.57□□□□□ -0.72
PDGFB-202ENST00000381551 TMEM70Q9BUB7 260 aa10.57□□□□□ -0.72
PDGFB-202ENST00000381551 SUMO2P61956 95 aaKnown RBP10.56□□□□□ -0.72
PDGFB-202ENST00000381551 WFDC10BQ8IUB3 73 aa10.56□□□□□ -0.72
PDGFB-202ENST00000381551 PRELID3AQ96N28 172 aa10.56□□□□□ -0.72
PDGFB-202ENST00000381551 TRBV27A0A0K0K1C4 114 aa10.55□□□□□ -0.72
PDGFB-202ENST00000381551 I3L3M4 83 aa10.55□□□□□ -0.72
PDGFB-202ENST00000381551 VCYO14598 125 aa10.55□□□□□ -0.72
PDGFB-202ENST00000381551 PHOX2AO14813 284 aa10.55□□□□□ -0.72
PDGFB-202ENST00000381551 SIVA1O15304 175 aa10.55□□□□□ -0.72
PDGFB-202ENST00000381551 NPYP01303 97 aa10.55□□□□□ -0.72
PDGFB-202ENST00000381551 MT-ND6P03923 174 aa10.55□□□□□ -0.72
PDGFB-202ENST00000381551 DEFB104AQ8WTQ1 72 aa10.55□□□□□ -0.72
PDGFB-202ENST00000381551 ATP6V1G1O75348 118 aa10.54□□□□□ -0.72
PDGFB-202ENST00000381551 PMCHP20382 165 aa10.54□□□□□ -0.72
PDGFB-202ENST00000381551 S100A1P23297 94 aa10.54□□□□□ -0.72
PDGFB-202ENST00000381551 IQCJQ1A5X6 159 aa10.54□□□□□ -0.72
PDGFB-202ENST00000381551 KIAA1644Q3SXP7 199 aa10.54□□□□□ -0.72
PDGFB-202ENST00000381551 MRPL18Q9H0U6 180 aaKnown RBP10.54□□□□□ -0.72
PDGFB-202ENST00000381551 LAMTOR2Q9Y2Q5 125 aa10.54□□□□□ -0.72
PDGFB-202ENST00000381551 IGLV2-18A0A075B6J9 118 aa10.53□□□□□ -0.72
PDGFB-202ENST00000381551 PRSS47A8MTI9 375 aa10.53□□□□□ -0.72
PDGFB-202ENST00000381551 DNAH10OSP0CZ25 163 aa10.53□□□□□ -0.72
PDGFB-202ENST00000381551 RPL32P62910 135 aaKnown RBP10.53□□□□□ -0.72
PDGFB-202ENST00000381551 FABP9Q0Z7S8 132 aa10.53□□□□□ -0.72
PDGFB-202ENST00000381551 COTL1Q14019 142 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms