RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 SRP19P09132 144 aaKnown RBP11.37□□□□□ -0.59
RER1-202ENST00000378512 NIT1Q86X76 327 aa11.37□□□□□ -0.59
RER1-202ENST00000378512 TPPP3Q9BW30 176 aa11.37□□□□□ -0.59
RER1-202ENST00000378512 EIF5A2Q9GZV4 153 aaKnown RBP11.37□□□□□ -0.59
RER1-202ENST00000378512 M0QY20 66 aa11.36□□□□□ -0.59
RER1-202ENST00000378512 SMIM17P0DL12 118 aa11.36□□□□□ -0.59
RER1-202ENST00000378512 NTF3P20783 257 aa11.36□□□□□ -0.59
RER1-202ENST00000378512 SSTP61278 116 aa11.36□□□□□ -0.59
RER1-202ENST00000378512 GTSF1Q8WW33 167 aa11.36□□□□□ -0.59
RER1-202ENST00000378512 CHCHD7Q9BUK0 85 aa11.36□□□□□ -0.59
RER1-202ENST00000378512 LRCOL1A6NCL2 159 aa11.35□□□□□ -0.59
RER1-202ENST00000378512 PGPEP1Q9NXJ5 209 aa11.35□□□□□ -0.59
RER1-202ENST00000378512 TRBV6-8A0A0A6YYG3 113 aa11.35□□□□□ -0.59
RER1-202ENST00000378512 F5H697 171 aa11.35□□□□□ -0.59
RER1-202ENST00000378512 TRGC1P0CF51 173 aa11.35□□□□□ -0.59
RER1-202ENST00000378512 FOXA3P55318 350 aaPredicted RBP11.35□□□□□ -0.59
RER1-202ENST00000378512 CT83Q5H943 113 aa11.35□□□□□ -0.59
RER1-202ENST00000378512 CDPF1Q6NVV7 123 aa11.35□□□□□ -0.59
RER1-202ENST00000378512 DAZ4Q86SG3 579 aaKnown RBP11.35□□□□□ -0.59
RER1-202ENST00000378512 LINC01551Q86U37 167 aa11.35□□□□□ -0.59
RER1-202ENST00000378512 SMIM7Q9BQ49 75 aa11.35□□□□□ -0.59
RER1-202ENST00000378512 DAZ3Q9NR90 486 aaKnown RBP11.35□□□□□ -0.59
RER1-202ENST00000378512 EREGO14944 169 aa11.34□□□□□ -0.59
RER1-202ENST00000378512 SUMO4Q6EEV6 95 aa11.34□□□□□ -0.59
RER1-202ENST00000378512 DNAJC30Q96LL9 226 aa11.34□□□□□ -0.59
RER1-202ENST00000378512 DPH3P1Q9H4G8 78 aa11.34□□□□□ -0.59
RER1-202ENST00000378512 NTM-AS1Q6ZSK4 140 aa11.33□□□□□ -0.6
RER1-202ENST00000378512 FAT1Q14517 4588 aa11.32□□□□□ -0.6
RER1-202ENST00000378512 TRAV8-3A0A0A6YYJ7 113 aa11.32□□□□□ -0.6
RER1-202ENST00000378512 ZNF727A8MUV8 499 aa11.32□□□□□ -0.6
RER1-202ENST00000378512 H7C1H1 209 aa11.32□□□□□ -0.6
RER1-202ENST00000378512 GATCO43716 136 aaKnown RBP11.32□□□□□ -0.6
RER1-202ENST00000378512 CEBPGP53567 150 aa11.32□□□□□ -0.6
RER1-202ENST00000378512 TMEM97Q5BJF2 176 aa11.32□□□□□ -0.6
RER1-202ENST00000378512 Q9HAA7 133 aa11.32□□□□□ -0.6
RER1-202ENST00000378512 A8MWL6 223 aa11.31□□□□□ -0.6
RER1-202ENST00000378512 MGPP08493 103 aa11.31□□□□□ -0.6
RER1-202ENST00000378512 SMDT1Q9H4I9 107 aa11.31□□□□□ -0.6
RER1-202ENST00000378512 OSTCQ9NRP0 149 aa11.31□□□□□ -0.6
RER1-202ENST00000378512 C9JQL5 133 aa11.3□□□□□ -0.6
RER1-202ENST00000378512 TWIST1Q15672 202 aa11.3□□□□□ -0.6
RER1-202ENST00000378512 FAM74A3Q4VXF1 159 aa11.3□□□□□ -0.6
RER1-202ENST00000378512 RASL11AQ6T310 242 aa11.3□□□□□ -0.6
RER1-202ENST00000378512 ATRAIDQ6UW56 229 aa11.3□□□□□ -0.6
RER1-202ENST00000378512 TM2D2Q9BX73 214 aa11.3□□□□□ -0.6
RER1-202ENST00000378512 URGCP-MRPS24S4R325 110 aa11.3□□□□□ -0.6
RER1-202ENST00000378512 FAM231BA6NCW3 169 aa11.29□□□□□ -0.6
RER1-202ENST00000378512 PSCAO43653 123 aa11.29□□□□□ -0.6
RER1-202ENST00000378512 KRTAP10-1P60331 282 aa11.29□□□□□ -0.6
RER1-202ENST00000378512 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.29□□□□□ -0.6
RER1-202ENST00000378512 FRZBQ92765 325 aa11.29□□□□□ -0.6
RER1-202ENST00000378512 GFRA4Q9GZZ7 299 aa11.29□□□□□ -0.6
RER1-202ENST00000378512 NIT2Q9NQR4 276 aa11.29□□□□□ -0.6
RER1-202ENST00000378512 A0A087WX48 190 aa11.28□□□□□ -0.6
RER1-202ENST00000378512 XGP55808 180 aa11.28□□□□□ -0.6
RER1-202ENST00000378512 SRSF3P84103 164 aaKnown RBP11.28□□□□□ -0.6
RER1-202ENST00000378512 IQCJQ1A5X6 159 aa11.28□□□□□ -0.6
RER1-202ENST00000378512 ELOBQ15370 118 aa11.27□□□□□ -0.6
RER1-202ENST00000378512 TSKUQ8WUA8 353 aa11.27□□□□□ -0.6
RER1-202ENST00000378512 ISOC2Q96AB3 205 aa11.27□□□□□ -0.6
RER1-202ENST00000378512 PGLYRP4Q96LB8 373 aa11.27□□□□□ -0.6
RER1-202ENST00000378512 KLK12Q9UKR0 248 aa11.27□□□□□ -0.6
RER1-202ENST00000378512 COX11Q9Y6N1 276 aa11.27□□□□□ -0.6
RER1-202ENST00000378512 PKIAP61925 76 aa11.26□□□□□ -0.61
RER1-202ENST00000378512 MPV17L2Q567V2 206 aa11.26□□□□□ -0.61
RER1-202ENST00000378512 Q8N814 137 aa11.26□□□□□ -0.61
RER1-202ENST00000378512 GATD1Q8NB37 220 aa11.26□□□□□ -0.61
RER1-202ENST00000378512 V9GYV3 84 aa11.26□□□□□ -0.61
RER1-202ENST00000378512 RPL23P62829 140 aaKnown RBP11.26□□□□□ -0.61
RER1-202ENST00000378512 PEA15Q15121 130 aa11.26□□□□□ -0.61
RER1-202ENST00000378512 TMEM241Q24JQ0 296 aa11.26□□□□□ -0.61
RER1-202ENST00000378512 NTN5Q8WTR8 489 aaPredicted RBP11.26□□□□□ -0.61
RER1-202ENST00000378512 TRBV25-1A0A075B6N4 114 aa11.25□□□□□ -0.61
RER1-202ENST00000378512 HIGD1CA8MV81 97 aa11.25□□□□□ -0.61
RER1-202ENST00000378512 HAMPP81172 84 aa11.25□□□□□ -0.61
RER1-202ENST00000378512 WFDC2Q14508 124 aa11.25□□□□□ -0.61
RER1-202ENST00000378512 VPS13BQ7Z7G8 4022 aa11.24□□□□□ -0.61
RER1-202ENST00000378512 Q0VG73 95 aa11.24□□□□□ -0.61
RER1-202ENST00000378512 KCNIP4Q6PIL6 250 aa11.24□□□□□ -0.61
RER1-202ENST00000378512 ENHOQ6UWT2 76 aa11.24□□□□□ -0.61
RER1-202ENST00000378512 RMI2Q96E14 147 aa11.24□□□□□ -0.61
RER1-202ENST00000378512 CHCHD5Q9BSY4 110 aa11.24□□□□□ -0.61
RER1-202ENST00000378512 NAT8Q9UHE5 227 aa11.24□□□□□ -0.61
RER1-202ENST00000378512 HERC1Q15751 4861 aa11.23□□□□□ -0.61
RER1-202ENST00000378512 IGHV1-24A0A0C4DH33 117 aa11.23□□□□□ -0.61
RER1-202ENST00000378512 A0A1B0GUT8 65 aa11.23□□□□□ -0.61
RER1-202ENST00000378512 EPM2AB3EWF7 344 aa11.23□□□□□ -0.61
RER1-202ENST00000378512 TMEM262E9PQX1 116 aa11.23□□□□□ -0.61
RER1-202ENST00000378512 UBE2WQ96B02 151 aa11.23□□□□□ -0.61
RER1-202ENST00000378512 PRR34Q9NV39 138 aa11.23□□□□□ -0.61
RER1-202ENST00000378512 TRAV26-2A0A0B4J265 109 aa11.22□□□□□ -0.61
RER1-202ENST00000378512 SMIM15Q7Z3B0 74 aa11.22□□□□□ -0.61
RER1-202ENST00000378512 C15orf54Q8N8G6 183 aa11.22□□□□□ -0.61
RER1-202ENST00000378512 Q8N976 141 aa11.22□□□□□ -0.61
RER1-202ENST00000378512 TMEM191AQ9H0A3 160 aa11.22□□□□□ -0.61
RER1-202ENST00000378512 A0A1B0GUV1 79 aa11.21□□□□□ -0.61
RER1-202ENST00000378512 RBX1P62877 108 aa11.21□□□□□ -0.61
RER1-202ENST00000378512 IGKV2D-24A0A075B6R9 120 aa11.2□□□□□ -0.62
RER1-202ENST00000378512 TRBV6-5A0A0K0K1A5 114 aa11.2□□□□□ -0.62
RER1-202ENST00000378512 GCSHP23434 173 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms