RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 RBMY1A1P0DJD3 496 aaKnown RBP15.04■□□□□ -0
CLN5-201ENST00000377453 RBMY1CP0DJD4 496 aa15.04■□□□□ -0
CLN5-201ENST00000377453 RBMY1FQ15415 496 aaKnown RBP15.04■□□□□ -0
CLN5-201ENST00000377453 TRBV27A0A0K0K1C4 114 aa15.04■□□□□ -0
CLN5-201ENST00000377453 KNCNA6PVL3 124 aa15.04■□□□□ -0
CLN5-201ENST00000377453 DEFB136Q30KP8 78 aa15.04■□□□□ -0
CLN5-201ENST00000377453 RNASE13Q5GAN3 156 aaKnown RBP15.04■□□□□ -0
CLN5-201ENST00000377453 HERVK_113P61574 105 aa15.03■□□□□ -0
CLN5-201ENST00000377453 ZNF876PQ49A33 203 aa15.03■□□□□ -0
CLN5-201ENST00000377453 BBC3Q96PG8 261 aaPredicted RBP15.03■□□□□ -0
CLN5-201ENST00000377453 MXRA5Q9NR99 2828 aa15.03■□□□□ -0
CLN5-201ENST00000377453 ABCA12Q86UK0 2595 aa15.03■□□□□ -0
CLN5-201ENST00000377453 IGHV1OR15-1A0A075B7D0 117 aa15.03■□□□□ -0
CLN5-201ENST00000377453 K7EQG2 157 aa15.03■□□□□ -0
CLN5-201ENST00000377453 CEMP1Q6PRD7 247 aaPredicted RBP15.03■□□□□ -0
CLN5-201ENST00000377453 AMELXQ99217 191 aa15.03■□□□□ -0
CLN5-201ENST00000377453 ADARB2-AS1A8MUL3 147 aa15.02□□□□□ -0.01
CLN5-201ENST00000377453 B4DSR2 109 aa15.02□□□□□ -0.01
CLN5-201ENST00000377453 CFC1BP0CG36 223 aa15.02□□□□□ -0.01
CLN5-201ENST00000377453 CFC1P0CG37 223 aa15.02□□□□□ -0.01
CLN5-201ENST00000377453 SNRPD3P62318 126 aaKnown RBP15.02□□□□□ -0.01
CLN5-201ENST00000377453 NDUFA11Q86Y39 141 aa15.02□□□□□ -0.01
CLN5-201ENST00000377453 TIMM17AQ99595 171 aa15.02□□□□□ -0.01
CLN5-201ENST00000377453 A0A0J9YXV3 536 aa15.01□□□□□ -0.01
CLN5-201ENST00000377453 J3QQQ9 107 aa15.01□□□□□ -0.01
CLN5-201ENST00000377453 DUX3Q96PT4 197 aa15.01□□□□□ -0.01
CLN5-201ENST00000377453 NDUFS8O00217 210 aa15.01□□□□□ -0.01
CLN5-201ENST00000377453 IGHV3-30P01768 117 aa15.01□□□□□ -0.01
CLN5-201ENST00000377453 IGHV3-30-5P0DP03 117 aa15.01□□□□□ -0.01
CLN5-201ENST00000377453 NFE4Q86UQ8 179 aa15.01□□□□□ -0.01
CLN5-201ENST00000377453 TMEM141Q96I45 108 aa15.01□□□□□ -0.01
CLN5-201ENST00000377453 H7C2G1 150 aa15□□□□□ -0.01
CLN5-201ENST00000377453 RPL32P62910 135 aaKnown RBP15□□□□□ -0.01
CLN5-201ENST00000377453 NBPF19A0A087WUL8 3843 aa15□□□□□ -0.01
CLN5-201ENST00000377453 TMEM238LA0A1B0GVL6 79 aa15□□□□□ -0.01
CLN5-201ENST00000377453 A6NJY4 79 aa15□□□□□ -0.01
CLN5-201ENST00000377453 SIGMAR1Q99720 223 aa15□□□□□ -0.01
CLN5-201ENST00000377453 PTPN13Q12923 2485 aa15□□□□□ -0.01
CLN5-201ENST00000377453 EIF4EBP3O60516 100 aaPredicted RBP14.99□□□□□ -0.01
CLN5-201ENST00000377453 CFAP126Q5VTH2 177 aa14.99□□□□□ -0.01
CLN5-201ENST00000377453 DLX4Q92988 240 aaPredicted RBP14.99□□□□□ -0.01
CLN5-201ENST00000377453 LGALS3P17931 250 aaKnown RBP14.99□□□□□ -0.01
CLN5-201ENST00000377453 RAX2Q96IS3 184 aa14.99□□□□□ -0.01
CLN5-201ENST00000377453 TCL1BO95988 128 aa14.98□□□□□ -0.01
CLN5-201ENST00000377453 HOXD3P31249 432 aaPredicted RBP14.98□□□□□ -0.01
CLN5-201ENST00000377453 SYT8Q8NBV8 401 aa14.98□□□□□ -0.01
CLN5-201ENST00000377453 TRBV6-5A0A0K0K1A5 114 aa14.98□□□□□ -0.01
CLN5-201ENST00000377453 ANKRD17O75179 2603 aaKnown RBP14.97□□□□□ -0.01
CLN5-201ENST00000377453 TRAV2A0A0B4J234 112 aa14.97□□□□□ -0.01
CLN5-201ENST00000377453 SLURP1P55000 103 aa14.97□□□□□ -0.01
CLN5-201ENST00000377453 SLC25A29Q8N8R3 303 aa14.97□□□□□ -0.01
CLN5-201ENST00000377453 BEX4Q9NWD9 120 aaPredicted RBP14.97□□□□□ -0.01
CLN5-201ENST00000377453 ZNF22P17026 224 aaPredicted RBP14.96□□□□□ -0.01
CLN5-201ENST00000377453 PAPPA-AS1Q5QFB9 102 aa14.96□□□□□ -0.01
CLN5-201ENST00000377453 UBE2D3P61077 147 aa14.96□□□□□ -0.02
CLN5-201ENST00000377453 UBE2D2P62837 147 aa14.96□□□□□ -0.02
CLN5-201ENST00000377453 FHL3Q13643 280 aa14.96□□□□□ -0.02
CLN5-201ENST00000377453 TRPT1Q86TN4 253 aaKnown RBP14.96□□□□□ -0.02
CLN5-201ENST00000377453 C20orf203Q8NBC4 194 aa14.96□□□□□ -0.02
CLN5-201ENST00000377453 IGLV4-3A0A075B6K6 122 aa14.95□□□□□ -0.02
CLN5-201ENST00000377453 A4D1N5 150 aa14.95□□□□□ -0.02
CLN5-201ENST00000377453 TMEM223A0PJW6 202 aa14.95□□□□□ -0.02
CLN5-201ENST00000377453 A8MZ25 164 aa14.94□□□□□ -0.02
CLN5-201ENST00000377453 J3QR89 54 aa14.94□□□□□ -0.02
CLN5-201ENST00000377453 DEFB131AP59861 70 aa14.94□□□□□ -0.02
CLN5-201ENST00000377453 NSUN5P1Q3KNT7 163 aa14.94□□□□□ -0.02
CLN5-201ENST00000377453 TCTEX1D4Q5JR98 221 aa14.94□□□□□ -0.02
CLN5-201ENST00000377453 SPXQ9BT56 116 aa14.94□□□□□ -0.02
CLN5-201ENST00000377453 FOXI1Q12951 378 aa14.94□□□□□ -0.02
CLN5-201ENST00000377453 Q6ZSN1 163 aa14.94□□□□□ -0.02
CLN5-201ENST00000377453 TRAV8-3A0A0A6YYJ7 113 aa14.93□□□□□ -0.02
CLN5-201ENST00000377453 C1QTNF4Q9BXJ3 329 aa14.93□□□□□ -0.02
CLN5-201ENST00000377453 RBMY1BA6NDE4 496 aaKnown RBP14.93□□□□□ -0.02
CLN5-201ENST00000377453 RBMY1EA6NEQ0 496 aaKnown RBP14.93□□□□□ -0.02
CLN5-201ENST00000377453 I3L3M4 83 aa14.93□□□□□ -0.02
CLN5-201ENST00000377453 RBMY1DP0C7P1 496 aaKnown RBP14.93□□□□□ -0.02
CLN5-201ENST00000377453 SCGB1C2P0DMR2 95 aa14.93□□□□□ -0.02
CLN5-201ENST00000377453 C10orf126Q8N4M7 172 aa14.93□□□□□ -0.02
CLN5-201ENST00000377453 RHODO00212 210 aa14.92□□□□□ -0.02
CLN5-201ENST00000377453 FAM104AQ969W3 186 aa14.92□□□□□ -0.02
CLN5-201ENST00000377453 SPATA25Q9BR10 227 aa14.92□□□□□ -0.02
CLN5-201ENST00000377453 MUSTN1Q8IVN3 82 aa14.92□□□□□ -0.02
CLN5-201ENST00000377453 CARD19Q96LW7 228 aa14.92□□□□□ -0.02
CLN5-201ENST00000377453 VCX2Q9H322 139 aa14.92□□□□□ -0.02
CLN5-201ENST00000377453 MYO9AB2RTY4 2548 aa14.91□□□□□ -0.02
CLN5-201ENST00000377453 TLN2Q9Y4G6 2542 aa14.91□□□□□ -0.02
CLN5-201ENST00000377453 ODF3Q96PU9 254 aa14.91□□□□□ -0.02
CLN5-201ENST00000377453 IGHV3-38A0A0C4DH36 116 aa14.91□□□□□ -0.02
CLN5-201ENST00000377453 RHOHQ15669 191 aa14.91□□□□□ -0.02
CLN5-201ENST00000377453 CD28P10747 220 aa14.9□□□□□ -0.02
CLN5-201ENST00000377453 ZNF702PQ9H963 129 aa14.9□□□□□ -0.02
CLN5-201ENST00000377453 UBR5O95071 2799 aaPredicted RBP14.9□□□□□ -0.02
CLN5-201ENST00000377453 LEPROTO15243 131 aa14.9□□□□□ -0.02
CLN5-201ENST00000377453 ELANEP08246 267 aa14.9□□□□□ -0.02
CLN5-201ENST00000377453 NPC2P61916 151 aa14.9□□□□□ -0.02
CLN5-201ENST00000377453 LINC01356Q8N9X3 169 aa14.9□□□□□ -0.02
CLN5-201ENST00000377453 ZNF469Q96JG9 3925 aaPredicted RBP14.9□□□□□ -0.02
CLN5-201ENST00000377453 NACAE9PAV3 2078 aa14.89□□□□□ -0.03
CLN5-201ENST00000377453 PRO1854Q9UHT4 67 aa14.89□□□□□ -0.03
CLN5-201ENST00000377453 TEX15Q9BXT5 2789 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms