RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 IGLV1-40P01703 118 aa10.33□□□□□ -0.76
SF1-205ENST00000377394 SLC25A29Q8N8R3 303 aa10.33□□□□□ -0.76
SF1-205ENST00000377394 C10orf105Q8TEF2 133 aa10.33□□□□□ -0.76
SF1-205ENST00000377394 ID1P41134 155 aa10.33□□□□□ -0.76
SF1-205ENST00000377394 LINC00315P59091 139 aa10.33□□□□□ -0.76
SF1-205ENST00000377394 KIF25-AS1Q9Y6Z4 181 aa10.33□□□□□ -0.76
SF1-205ENST00000377394 TRAV8-4A0A0B4J246 113 aa10.32□□□□□ -0.76
SF1-205ENST00000377394 IGHV3-33P01772 117 aa10.32□□□□□ -0.76
SF1-205ENST00000377394 EDN2P20800 178 aa10.32□□□□□ -0.76
SF1-205ENST00000377394 CHCHD5Q9BSY4 110 aa10.32□□□□□ -0.76
SF1-205ENST00000377394 PRORYQ9H606 182 aa10.32□□□□□ -0.76
SF1-205ENST00000377394 KLLNB2CW77 178 aa10.32□□□□□ -0.76
SF1-205ENST00000377394 TMEM170BQ5T4T1 132 aa10.32□□□□□ -0.76
SF1-205ENST00000377394 DAZ1Q9NQZ3 744 aaKnown RBP10.32□□□□□ -0.76
SF1-205ENST00000377394 CFHR3Q02985 330 aa10.31□□□□□ -0.76
SF1-205ENST00000377394 VPREB3Q9UKI3 123 aa10.31□□□□□ -0.76
SF1-205ENST00000377394 MUC4Q99102 2169 aa10.31□□□□□ -0.76
SF1-205ENST00000377394 LINC01620Q4KN68 170 aa10.31□□□□□ -0.76
SF1-205ENST00000377394 Q6Q795 121 aa10.31□□□□□ -0.76
SF1-205ENST00000377394 AMELXQ99217 191 aa10.31□□□□□ -0.76
SF1-205ENST00000377394 PPP1R17O96001 155 aa10.3□□□□□ -0.76
SF1-205ENST00000377394 RPL39P62891 51 aaKnown RBP10.3□□□□□ -0.76
SF1-205ENST00000377394 Q1RN00 199 aa10.3□□□□□ -0.76
SF1-205ENST00000377394 TMEM263Q8WUH6 116 aaKnown RBP10.3□□□□□ -0.76
SF1-205ENST00000377394 IGHV4OR15-8A0A075B7B6 117 aa10.29□□□□□ -0.76
SF1-205ENST00000377394 IGHV4-30-2A0A087WSY4 118 aa10.29□□□□□ -0.76
SF1-205ENST00000377394 A0A087WW49 117 aa10.29□□□□□ -0.76
SF1-205ENST00000377394 TRAV2A0A0B4J234 112 aa10.29□□□□□ -0.76
SF1-205ENST00000377394 CCL19Q99731 98 aa10.29□□□□□ -0.76
SF1-205ENST00000377394 HERVK_113P61574 105 aa10.29□□□□□ -0.76
SF1-205ENST00000377394 ZNRF2Q8NHG8 242 aa10.29□□□□□ -0.76
SF1-205ENST00000377394 DCANP1Q8TF63 244 aa10.29□□□□□ -0.76
SF1-205ENST00000377394 JPT2Q9H910 190 aa10.29□□□□□ -0.76
SF1-205ENST00000377394 K7EMT4 169 aa10.28□□□□□ -0.76
SF1-205ENST00000377394 TP53TG1Q9Y2A0 90 aa10.28□□□□□ -0.76
SF1-205ENST00000377394 IGHV3-64A0A075B6Q5 118 aa10.28□□□□□ -0.76
SF1-205ENST00000377394 MDFICQ9P1T7 246 aa10.28□□□□□ -0.76
SF1-205ENST00000377394 COL12A1Q99715 3063 aa10.28□□□□□ -0.76
SF1-205ENST00000377394 MUSTN1Q8IVN3 82 aa10.28□□□□□ -0.76
SF1-205ENST00000377394 J3QQQ9 107 aa10.27□□□□□ -0.77
SF1-205ENST00000377394 M0QXV9 152 aa10.27□□□□□ -0.77
SF1-205ENST00000377394 AVPP01185 164 aa10.27□□□□□ -0.77
SF1-205ENST00000377394 MSMBP08118 114 aa10.27□□□□□ -0.77
SF1-205ENST00000377394 POLR2KP53803 58 aaKnown RBP10.27□□□□□ -0.77
SF1-205ENST00000377394 ZNF56Q15929 161 aa10.27□□□□□ -0.77
SF1-205ENST00000377394 LGALS9O00182 355 aa10.27□□□□□ -0.77
SF1-205ENST00000377394 SUMO4Q6EEV6 95 aa10.27□□□□□ -0.77
SF1-205ENST00000377394 YAE1D1Q9NRH1 226 aa10.27□□□□□ -0.77
SF1-205ENST00000377394 IGIPA6NJ69 53 aa10.26□□□□□ -0.77
SF1-205ENST00000377394 H3BMM0 161 aa10.26□□□□□ -0.77
SF1-205ENST00000377394 ATXN8Q156A1 80 aa10.26□□□□□ -0.77
SF1-205ENST00000377394 UBE2WQ96B02 151 aa10.26□□□□□ -0.77
SF1-205ENST00000377394 DUX3Q96PT4 197 aa10.26□□□□□ -0.77
SF1-205ENST00000377394 LINC01587Q99440 93 aa10.26□□□□□ -0.77
SF1-205ENST00000377394 ATP5J2P56134 94 aa10.26□□□□□ -0.77
SF1-205ENST00000377394 TRAV12-3A0A0B4J271 114 aa10.25□□□□□ -0.77
SF1-205ENST00000377394 RPL13AP40429 203 aaKnown RBP10.25□□□□□ -0.77
SF1-205ENST00000377394 A0A087WWL8 130 aa10.25□□□□□ -0.77
SF1-205ENST00000377394 TRIAP1O43715 76 aa10.25□□□□□ -0.77
SF1-205ENST00000377394 LGALS3P17931 250 aaKnown RBP10.25□□□□□ -0.77
SF1-205ENST00000377394 PMVKQ15126 192 aa10.25□□□□□ -0.77
SF1-205ENST00000377394 OPRPNQ99935 248 aaPredicted RBP10.25□□□□□ -0.77
SF1-205ENST00000377394 TRBV10-2A0A0K0K1G8 114 aa10.24□□□□□ -0.77
SF1-205ENST00000377394 P0DMU3 169 aa10.24□□□□□ -0.77
SF1-205ENST00000377394 FAM231AP0DMU4 169 aa10.24□□□□□ -0.77
SF1-205ENST00000377394 FAM231CP0DMU5 169 aa10.24□□□□□ -0.77
SF1-205ENST00000377394 PSMB8P28062 276 aa10.24□□□□□ -0.77
SF1-205ENST00000377394 ZNF580Q9UK33 172 aa10.24□□□□□ -0.77
SF1-205ENST00000377394 C2orf82Q6UX34 121 aa10.24□□□□□ -0.77
SF1-205ENST00000377394 VCYO14598 125 aa10.23□□□□□ -0.77
SF1-205ENST00000377394 CELSR2Q9HCU4 2923 aa10.23□□□□□ -0.77
SF1-205ENST00000377394 IGHV3-16A0A0C4DH30 117 aa10.23□□□□□ -0.77
SF1-205ENST00000377394 C10orf99Q6UWK7 81 aa10.23□□□□□ -0.77
SF1-205ENST00000377394 Q6ZSV7 163 aa10.23□□□□□ -0.77
SF1-205ENST00000377394 C9orf85Q96MD7 179 aa10.23□□□□□ -0.77
SF1-205ENST00000377394 MAP1AP78559 2803 aaPredicted RBP10.23□□□□□ -0.77
SF1-205ENST00000377394 SDHAF1A6NFY7 115 aa10.22□□□□□ -0.77
SF1-205ENST00000377394 ADARB2-AS1A8MUL3 147 aa10.22□□□□□ -0.77
SF1-205ENST00000377394 H7C423 109 aa10.22□□□□□ -0.77
SF1-205ENST00000377394 ZNF22P17026 224 aaPredicted RBP10.22□□□□□ -0.77
SF1-205ENST00000377394 A0A0B4J2C4 111 aa10.22□□□□□ -0.77
SF1-205ENST00000377394 F5H697 171 aa10.22□□□□□ -0.77
SF1-205ENST00000377394 LINC00694P0DN24 101 aa10.22□□□□□ -0.77
SF1-205ENST00000377394 CEMP1Q6PRD7 247 aaPredicted RBP10.22□□□□□ -0.77
SF1-205ENST00000377394 TRBV6-5A0A0K0K1A5 114 aa10.21□□□□□ -0.77
SF1-205ENST00000377394 TRBV27A0A0K0K1C4 114 aa10.21□□□□□ -0.77
SF1-205ENST00000377394 LOC107984640A0A0U1RRK4 108 aa10.21□□□□□ -0.77
SF1-205ENST00000377394 PAPPA-AS1Q5QFB9 102 aa10.21□□□□□ -0.77
SF1-205ENST00000377394 TMEM141Q96I45 108 aa10.21□□□□□ -0.77
SF1-205ENST00000377394 TIMM17AQ99595 171 aa10.21□□□□□ -0.77
SF1-205ENST00000377394 SPG11Q96JI7 2443 aa10.21□□□□□ -0.77
SF1-205ENST00000377394 A0A0J9YX75 114 aa10.21□□□□□ -0.78
SF1-205ENST00000377394 B4DSR2 109 aa10.21□□□□□ -0.78
SF1-205ENST00000377394 CLEC2BQ92478 149 aa10.21□□□□□ -0.78
SF1-205ENST00000377394 TRAV12-2A0A075B6T6 113 aa10.2□□□□□ -0.78
SF1-205ENST00000377394 IGHV4-59P01825 116 aa10.2□□□□□ -0.78
SF1-205ENST00000377394 ZNF876PQ49A33 203 aa10.2□□□□□ -0.78
SF1-205ENST00000377394 IGKV3-20P01619 116 aa10.2□□□□□ -0.78
SF1-205ENST00000377394 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.19□□□□□ -0.782e-8■■■■□ 23.7
SF1-205ENST00000377394 FAM236AA0A1B0GUQ0 79 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms