RNA–Protein interactions for RNA: ENST00000377390.7

SF1-204, Transcript of splicing factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SF1, Length 3,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-204ENST00000377390 TRAV8-3A0A0A6YYJ7 113 aa9.26□□□□□ -0.93
SF1-204ENST00000377390 LOC107984640A0A0U1RRK4 108 aa9.26□□□□□ -0.93
SF1-204ENST00000377390 ATP6V0E1O15342 81 aa9.26□□□□□ -0.93
SF1-204ENST00000377390 TRAV21A0A0B4J279 112 aa9.25□□□□□ -0.93
SF1-204ENST00000377390 CD7P09564 240 aa9.25□□□□□ -0.93
SF1-204ENST00000377390 NEXN-AS1Q8NBZ9 246 aa9.25□□□□□ -0.93
SF1-204ENST00000377390 SPXQ9BT56 116 aa9.25□□□□□ -0.93
SF1-204ENST00000377390 FAM236AA0A1B0GUQ0 79 aa9.25□□□□□ -0.93
SF1-204ENST00000377390 FAM236BA0A1B0GV22 79 aa9.25□□□□□ -0.93
SF1-204ENST00000377390 F8W735 103 aaPredicted RBP9.25□□□□□ -0.93
SF1-204ENST00000377390 H3BMM0 161 aa9.25□□□□□ -0.93
SF1-204ENST00000377390 UBE2WQ96B02 151 aa9.25□□□□□ -0.93
SF1-204ENST00000377390 J3QQQ9 107 aa9.24□□□□□ -0.93
SF1-204ENST00000377390 PMVKQ15126 192 aa9.24□□□□□ -0.93
SF1-204ENST00000377390 LINC00477Q96M19 166 aa9.24□□□□□ -0.93
SF1-204ENST00000377390 IGHV7-4-1A0A0J9YVY3 117 aa9.24□□□□□ -0.93
SF1-204ENST00000377390 TOMM6Q96B49 74 aa9.24□□□□□ -0.93
SF1-204ENST00000377390 A0A0J9YY99 117 aa9.24□□□□□ -0.93
SF1-204ENST00000377390 BRI3O95415 125 aa9.24□□□□□ -0.93
SF1-204ENST00000377390 PRR9Q5T870 116 aa9.24□□□□□ -0.93
SF1-204ENST00000377390 EEF1AKMT3Q96AZ1 226 aa9.24□□□□□ -0.93
SF1-204ENST00000377390 EDA2RQ9HAV5 297 aa9.24□□□□□ -0.93
SF1-204ENST00000377390 NBEAL2Q6ZNJ1 2754 aa9.23□□□□□ -0.93
SF1-204ENST00000377390 RNASE13Q5GAN3 156 aaKnown RBP9.23□□□□□ -0.93
SF1-204ENST00000377390 IGHV7-81A0A0B4J1V7 117 aa9.23□□□□□ -0.93
SF1-204ENST00000377390 TRAV12-1A0A0B4J245 112 aa9.23□□□□□ -0.93
SF1-204ENST00000377390 ZFP36P26651 326 aaKnown RBP9.23□□□□□ -0.93
SF1-204ENST00000377390 KLK5Q9Y337 293 aaPredicted RBP9.23□□□□□ -0.93
SF1-204ENST00000377390 SDHAF1A6NFY7 115 aa9.22□□□□□ -0.93
SF1-204ENST00000377390 ATXN8Q156A1 80 aa9.22□□□□□ -0.93
SF1-204ENST00000377390 TRGV11A0A075B6L2 103 aa9.22□□□□□ -0.93
SF1-204ENST00000377390 IGHV3-73A0A0B4J1V6 119 aa9.22□□□□□ -0.93
SF1-204ENST00000377390 OOSP1A8MZH6 123 aa9.22□□□□□ -0.93
SF1-204ENST00000377390 MUSTN1Q8IVN3 82 aa9.22□□□□□ -0.93
SF1-204ENST00000377390 CNFNQ9BYD5 112 aa9.22□□□□□ -0.93
SF1-204ENST00000377390 NIPBLQ6KC79 2804 aaeCLIP9.22□□□□□ -0.93
SF1-204ENST00000377390 LINC01620Q4KN68 170 aa9.22□□□□□ -0.93
SF1-204ENST00000377390 COX6CP09669 75 aa9.21□□□□□ -0.93
SF1-204ENST00000377390 LINC00694P0DN24 101 aa9.21□□□□□ -0.93
SF1-204ENST00000377390 PF4V1P10720 104 aa9.21□□□□□ -0.93
SF1-204ENST00000377390 UBE2D3P61077 147 aa9.21□□□□□ -0.94
SF1-204ENST00000377390 UBE2D2P62837 147 aa9.21□□□□□ -0.94
SF1-204ENST00000377390 PAPPA-AS1Q5QFB9 102 aa9.21□□□□□ -0.94
SF1-204ENST00000377390 CLEC2BQ92478 149 aa9.21□□□□□ -0.94
SF1-204ENST00000377390 VPREB3Q9UKI3 123 aa9.21□□□□□ -0.94
SF1-204ENST00000377390 UBE2D1P51668 147 aa9.21□□□□□ -0.94
SF1-204ENST00000377390 RBAKDNA6NC62 111 aa9.2□□□□□ -0.94
SF1-204ENST00000377390 TNFRSF13BO14836 293 aaPredicted RBP9.2□□□□□ -0.94
SF1-204ENST00000377390 ELANEP08246 267 aa9.2□□□□□ -0.94
SF1-204ENST00000377390 UCNP55089 124 aa9.2□□□□□ -0.94
SF1-204ENST00000377390 TSPEAR-AS2P59090 65 aa9.19□□□□□ -0.94
SF1-204ENST00000377390 CCL19Q99731 98 aa9.19□□□□□ -0.94
SF1-204ENST00000377390 VCYO14598 125 aa9.19□□□□□ -0.94
SF1-204ENST00000377390 ZNF575Q86XF7 245 aa9.19□□□□□ -0.94
SF1-204ENST00000377390 TRAV41A0A0B4J266 112 aa9.19□□□□□ -0.94
SF1-204ENST00000377390 A0A0J9YXV3 536 aa9.19□□□□□ -0.94
SF1-204ENST00000377390 Q6ZSV7 163 aa9.19□□□□□ -0.94
SF1-204ENST00000377390 TMEM190Q8WZ59 177 aa9.19□□□□□ -0.94
SF1-204ENST00000377390 LY6LH3BQJ8 138 aa9.18□□□□□ -0.94
SF1-204ENST00000377390 SAA4P35542 130 aa9.18□□□□□ -0.94
SF1-204ENST00000377390 NPBQ8NG41 125 aa9.18□□□□□ -0.94
SF1-204ENST00000377390 TRAV12-2A0A075B6T6 113 aa9.18□□□□□ -0.94
SF1-204ENST00000377390 ZNF22P17026 224 aaPredicted RBP9.18□□□□□ -0.94
SF1-204ENST00000377390 ZNF625Q96I27 306 aaPredicted RBP9.18□□□□□ -0.94
SF1-204ENST00000377390 NBEAL1Q6ZS30 2694 aa9.18□□□□□ -0.94
SF1-204ENST00000377390 PPP1R17O96001 155 aa9.18□□□□□ -0.94
SF1-204ENST00000377390 ZNF876PQ49A33 203 aa9.18□□□□□ -0.94
SF1-204ENST00000377390 C20orf173Q96LM9 149 aa9.18□□□□□ -0.94
SF1-204ENST00000377390 TNFRSF18Q9Y5U5 241 aa9.18□□□□□ -0.94
SF1-204ENST00000377390 MXRA5Q9NR99 2828 aa9.18□□□□□ -0.94
SF1-204ENST00000377390 IGHV3-30P01768 117 aa9.17□□□□□ -0.94
SF1-204ENST00000377390 IGHV3-30-5P0DP03 117 aa9.17□□□□□ -0.94
SF1-204ENST00000377390 DAND5Q8N907 189 aa9.17□□□□□ -0.94
SF1-204ENST00000377390 Q8N9W7 124 aa9.17□□□□□ -0.94
SF1-204ENST00000377390 SLC25A29Q8N8R3 303 aa9.17□□□□□ -0.94
SF1-204ENST00000377390 ZNF580Q9UK33 172 aa9.17□□□□□ -0.94
SF1-204ENST00000377390 UNQ9165/PRO28630Q6UXU0 137 aa9.16□□□□□ -0.94
SF1-204ENST00000377390 TMEM101Q96IK0 257 aa9.16□□□□□ -0.94
SF1-204ENST00000377390 CCDC140Q96MF4 163 aa9.16□□□□□ -0.94
SF1-204ENST00000377390 A0A1W2PRX2 142 aa9.16□□□□□ -0.94
SF1-204ENST00000377390 TRBV12-3P01733 135 aa9.16□□□□□ -0.94
SF1-204ENST00000377390 SUMO4Q6EEV6 95 aa9.16□□□□□ -0.94
SF1-204ENST00000377390 C9orf139Q6ZV77 190 aa9.16□□□□□ -0.94
SF1-204ENST00000377390 ZNRF2Q8NHG8 242 aa9.16□□□□□ -0.94
SF1-204ENST00000377390 ZFAND3Q9H8U3 227 aa9.16□□□□□ -0.94
SF1-204ENST00000377390 SRSF2Q01130 221 aaKnown RBP9.15□□□□□ -0.94
SF1-204ENST00000377390 FAM110DQ8TAY7 271 aaPredicted RBP9.15□□□□□ -0.94
SF1-204ENST00000377390 ODF3Q96PU9 254 aa9.15□□□□□ -0.94
SF1-204ENST00000377390 CENPVL3A0A0U1RRI6 287 aa9.15□□□□□ -0.94
SF1-204ENST00000377390 IGHV3-33P01772 117 aa9.15□□□□□ -0.94
SF1-204ENST00000377390 C9orf47Q6ZRZ4 202 aa9.15□□□□□ -0.94
SF1-204ENST00000377390 KLK9Q9UKQ9 250 aa9.15□□□□□ -0.94
SF1-204ENST00000377390 M0R2P5 195 aa9.15□□□□□ -0.95
SF1-204ENST00000377390 CRYGDP07320 174 aa9.15□□□□□ -0.95
SF1-204ENST00000377390 COX8CQ7Z4L0 72 aa9.15□□□□□ -0.95
SF1-204ENST00000377390 KNCNA6PVL3 124 aa9.14□□□□□ -0.95
SF1-204ENST00000377390 CD28P10747 220 aa9.14□□□□□ -0.95
SF1-204ENST00000377390 CEMP1Q6PRD7 247 aaPredicted RBP9.14□□□□□ -0.95
SF1-204ENST00000377390 IGHV4-61A0A0C4DH41 118 aa9.14□□□□□ -0.95
SF1-204ENST00000377390 H3BUX3 64 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms