RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 J3QLI3 93 aa18.66■□□□□ 0.58
C9orf40-201ENST00000376854 P0DMU3 169 aa18.66■□□□□ 0.58
C9orf40-201ENST00000376854 FAM231AP0DMU4 169 aa18.66■□□□□ 0.58
C9orf40-201ENST00000376854 FAM231CP0DMU5 169 aa18.66■□□□□ 0.58
C9orf40-201ENST00000376854 VPREB3Q9UKI3 123 aa18.66■□□□□ 0.58
C9orf40-201ENST00000376854 TRGV11A0A075B6L2 103 aa18.66■□□□□ 0.58
C9orf40-201ENST00000376854 APOMO95445 188 aa18.66■□□□□ 0.58
C9orf40-201ENST00000376854 TSPAN13O95857 204 aa18.66■□□□□ 0.58
C9orf40-201ENST00000376854 ELANEP08246 267 aa18.66■□□□□ 0.58
C9orf40-201ENST00000376854 J3QR89 54 aa18.65■□□□□ 0.58
C9orf40-201ENST00000376854 NFE4Q86UQ8 179 aa18.65■□□□□ 0.58
C9orf40-201ENST00000376854 J3QQQ9 107 aa18.65■□□□□ 0.58
C9orf40-201ENST00000376854 I3L3M4 83 aa18.64■□□□□ 0.57
C9orf40-201ENST00000376854 SLC25A29Q8N8R3 303 aa18.64■□□□□ 0.57
C9orf40-201ENST00000376854 C20orf203Q8NBC4 194 aa18.64■□□□□ 0.57
C9orf40-201ENST00000376854 UBE2E2Q96LR5 201 aa18.64■□□□□ 0.57
C9orf40-201ENST00000376854 AMELXQ99217 191 aa18.64■□□□□ 0.57
C9orf40-201ENST00000376854 LGALS3P17931 250 aaKnown RBP18.63■□□□□ 0.57
C9orf40-201ENST00000376854 KRTAP10-9P60411 292 aa18.63■□□□□ 0.57
C9orf40-201ENST00000376854 IGHV3-30P01768 117 aa18.63■□□□□ 0.57
C9orf40-201ENST00000376854 IGHV3-30-5P0DP03 117 aa18.63■□□□□ 0.57
C9orf40-201ENST00000376854 SFTA2Q6UW10 78 aa18.63■□□□□ 0.57
C9orf40-201ENST00000376854 NDUFA11Q86Y39 141 aa18.63■□□□□ 0.57
C9orf40-201ENST00000376854 RNF152Q8N8N0 203 aa18.63■□□□□ 0.57
C9orf40-201ENST00000376854 DLX4Q92988 240 aaPredicted RBP18.63■□□□□ 0.57
C9orf40-201ENST00000376854 LOC107984156A0A0G2JMH3 177 aa18.62■□□□□ 0.57
C9orf40-201ENST00000376854 ARL17AQ8IVW1 177 aa18.62■□□□□ 0.57
C9orf40-201ENST00000376854 ZNF702PQ9H963 129 aa18.62■□□□□ 0.57
C9orf40-201ENST00000376854 TCTEX1D4Q5JR98 221 aa18.62■□□□□ 0.57
C9orf40-201ENST00000376854 RBMY1A1P0DJD3 496 aaKnown RBP18.61■□□□□ 0.57
C9orf40-201ENST00000376854 RBMY1CP0DJD4 496 aa18.61■□□□□ 0.57
C9orf40-201ENST00000376854 RBMY1FQ15415 496 aaKnown RBP18.61■□□□□ 0.57
C9orf40-201ENST00000376854 SPAG8Q99932 426 aaPredicted RBP18.61■□□□□ 0.57
C9orf40-201ENST00000376854 TSSC4Q9Y5U2 329 aaPredicted RBP18.61■□□□□ 0.57
C9orf40-201ENST00000376854 NAV2Q8IVL1 2488 aa18.61■□□□□ 0.57
C9orf40-201ENST00000376854 KNCNA6PVL3 124 aa18.6■□□□□ 0.57
C9orf40-201ENST00000376854 HTN1P15515 57 aa18.6■□□□□ 0.57
C9orf40-201ENST00000376854 TEX15Q9BXT5 2789 aa18.6■□□□□ 0.57
C9orf40-201ENST00000376854 TMEM223A0PJW6 202 aa18.6■□□□□ 0.57
C9orf40-201ENST00000376854 PSMB2P49721 201 aa18.6■□□□□ 0.57
C9orf40-201ENST00000376854 Q6YL49 198 aa18.59■□□□□ 0.57
C9orf40-201ENST00000376854 LEPROTO15243 131 aa18.58■□□□□ 0.57
C9orf40-201ENST00000376854 UBE2D3P61077 147 aa18.58■□□□□ 0.57
C9orf40-201ENST00000376854 UBE2D2P62837 147 aa18.58■□□□□ 0.57
C9orf40-201ENST00000376854 CFC1BP0CG36 223 aa18.58■□□□□ 0.56
C9orf40-201ENST00000376854 CFC1P0CG37 223 aa18.58■□□□□ 0.56
C9orf40-201ENST00000376854 IGLV4-3A0A075B6K6 122 aa18.57■□□□□ 0.56
C9orf40-201ENST00000376854 CFAP126Q5VTH2 177 aa18.57■□□□□ 0.56
C9orf40-201ENST00000376854 VCX2Q9H322 139 aa18.57■□□□□ 0.56
C9orf40-201ENST00000376854 IGHV3-73A0A0B4J1V6 119 aa18.57■□□□□ 0.56
C9orf40-201ENST00000376854 GAGE12HA6NDE8 117 aa18.57■□□□□ 0.56
C9orf40-201ENST00000376854 TMEM238C9JI98 176 aa18.57■□□□□ 0.56
C9orf40-201ENST00000376854 IGHV4-31P0DP07 118 aa18.57■□□□□ 0.56
C9orf40-201ENST00000376854 ZNF22P17026 224 aaPredicted RBP18.57■□□□□ 0.56
C9orf40-201ENST00000376854 BEX4Q9NWD9 120 aaPredicted RBP18.57■□□□□ 0.56
C9orf40-201ENST00000376854 SLURP1P55000 103 aa18.56■□□□□ 0.56
C9orf40-201ENST00000376854 DEFB131AP59861 70 aa18.56■□□□□ 0.56
C9orf40-201ENST00000376854 RHODO00212 210 aa18.56■□□□□ 0.56
C9orf40-201ENST00000376854 INSL3P51460 131 aa18.56■□□□□ 0.56
C9orf40-201ENST00000376854 GTSF1LQ9H1H1 148 aa18.56■□□□□ 0.56
C9orf40-201ENST00000376854 IGHV3-64A0A075B6Q5 118 aa18.55■□□□□ 0.56
C9orf40-201ENST00000376854 A0A0J9YXV3 536 aa18.55■□□□□ 0.56
C9orf40-201ENST00000376854 FSHBP01225 129 aa18.55■□□□□ 0.56
C9orf40-201ENST00000376854 DEFB136Q30KP8 78 aa18.55■□□□□ 0.56
C9orf40-201ENST00000376854 LYRM7Q5U5X0 104 aa18.55■□□□□ 0.56
C9orf40-201ENST00000376854 SIGMAR1Q99720 223 aa18.55■□□□□ 0.56
C9orf40-201ENST00000376854 SORL1Q92673 2214 aa18.55■□□□□ 0.56
C9orf40-201ENST00000376854 SMCPP49901 116 aaPredicted RBP18.55■□□□□ 0.56
C9orf40-201ENST00000376854 C18orf65Q6ZTR6 163 aa18.55■□□□□ 0.56
C9orf40-201ENST00000376854 ZNF843Q8N446 348 aa18.55■□□□□ 0.56
C9orf40-201ENST00000376854 CR1P17927 2039 aa18.55■□□□□ 0.56
C9orf40-201ENST00000376854 CREBBPQ92793 2442 aa18.54■□□□□ 0.56
C9orf40-201ENST00000376854 PROK1P58294 105 aa18.54■□□□□ 0.56
C9orf40-201ENST00000376854 EDA2RQ9HAV5 297 aa18.54■□□□□ 0.56
C9orf40-201ENST00000376854 AZU1P20160 251 aa18.53■□□□□ 0.56
C9orf40-201ENST00000376854 C10orf126Q8N4M7 172 aa18.53■□□□□ 0.56
C9orf40-201ENST00000376854 EPG5Q9HCE0 2579 aa18.52■□□□□ 0.56
C9orf40-201ENST00000376854 H3BMM0 161 aa18.51■□□□□ 0.55
C9orf40-201ENST00000376854 DUX3Q96PT4 197 aa18.51■□□□□ 0.55
C9orf40-201ENST00000376854 SPATA25Q9BR10 227 aa18.51■□□□□ 0.55
C9orf40-201ENST00000376854 PRO1854Q9UHT4 67 aa18.51■□□□□ 0.55
C9orf40-201ENST00000376854 ZNF469Q96JG9 3925 aaPredicted RBP18.51■□□□□ 0.55
C9orf40-201ENST00000376854 PRM2P04554 102 aa18.51■□□□□ 0.55
C9orf40-201ENST00000376854 ZNF418Q8TF45 676 aaPredicted RBP18.51■□□□□ 0.55
C9orf40-201ENST00000376854 C1QTNF4Q9BXJ3 329 aa18.51■□□□□ 0.55
C9orf40-201ENST00000376854 RBMY1BA6NDE4 496 aaKnown RBP18.5■□□□□ 0.55
C9orf40-201ENST00000376854 RBMY1EA6NEQ0 496 aaKnown RBP18.5■□□□□ 0.55
C9orf40-201ENST00000376854 RBMY1DP0C7P1 496 aaKnown RBP18.5■□□□□ 0.55
C9orf40-201ENST00000376854 CD28P10747 220 aa18.5■□□□□ 0.55
C9orf40-201ENST00000376854 PYGO1Q9Y3Y4 419 aa18.5■□□□□ 0.55
C9orf40-201ENST00000376854 TNFRSF18Q9Y5U5 241 aa18.5■□□□□ 0.55
C9orf40-201ENST00000376854 A8MTW9 85 aa18.49■□□□□ 0.55
C9orf40-201ENST00000376854 TCL1BO95988 128 aa18.49■□□□□ 0.55
C9orf40-201ENST00000376854 M0R2P5 195 aa18.49■□□□□ 0.55
C9orf40-201ENST00000376854 Q5PR19 223 aa18.49■□□□□ 0.55
C9orf40-201ENST00000376854 ATP6V0E2Q8NHE4 81 aa18.49■□□□□ 0.55
C9orf40-201ENST00000376854 A4D1N5 150 aa18.48■□□□□ 0.55
C9orf40-201ENST00000376854 FOXI1Q12951 378 aa18.48■□□□□ 0.55
C9orf40-201ENST00000376854 MYO9AB2RTY4 2548 aa18.48■□□□□ 0.55
C9orf40-201ENST00000376854 TRBV20-1A0A075B6N2 111 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms