RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 IGLV5-45A0A087WSX0 123 aa6.6□□□□□ -1.35
UBR4-201ENST00000375218 F2Z2F3 143 aa6.6□□□□□ -1.35
UBR4-201ENST00000375218 TMEM252Q8N6L7 170 aa6.6□□□□□ -1.35
UBR4-201ENST00000375218 NABP2Q9BQ15 211 aa6.6□□□□□ -1.35
UBR4-201ENST00000375218 FAM215AQ9Y5M1 114 aa6.6□□□□□ -1.35
UBR4-201ENST00000375218 IGHV4-28A0A0C4DH34 117 aa6.59□□□□□ -1.35
UBR4-201ENST00000375218 RNASE4P34096 147 aaKnown RBP6.59□□□□□ -1.35
UBR4-201ENST00000375218 SMIM4Q8WVI0 70 aa6.59□□□□□ -1.35
UBR4-201ENST00000375218 ACACAQ13085 2346 aa6.59□□□□□ -1.35
UBR4-201ENST00000375218 IGKV3D-15A0A087WSY6 115 aa6.59□□□□□ -1.35
UBR4-201ENST00000375218 FAM53AQ6NSI3 398 aaPredicted RBP6.59□□□□□ -1.35
UBR4-201ENST00000375218 CHCHD1Q96BP2 118 aaKnown RBP6.59□□□□□ -1.35
UBR4-201ENST00000375218 TAS2R4Q9NYW5 299 aa6.59□□□□□ -1.35
UBR4-201ENST00000375218 TRAV1-2A0A0B4J238 106 aa6.59□□□□□ -1.36
UBR4-201ENST00000375218 COL8A2P25067 703 aa6.59□□□□□ -1.36
UBR4-201ENST00000375218 ZFP36P26651 326 aaKnown RBP6.59□□□□□ -1.36
UBR4-201ENST00000375218 CACNA1DQ01668 2161 aa6.58□□□□□ -1.36
UBR4-201ENST00000375218 IGHV3OR16-12A0A075B7B8 117 aa6.58□□□□□ -1.36
UBR4-201ENST00000375218 SLC25A22Q9H936 323 aa6.58□□□□□ -1.36
UBR4-201ENST00000375218 HIVEP3Q5T1R4 2406 aa6.58□□□□□ -1.36
UBR4-201ENST00000375218 C9JCJ5 164 aa6.58□□□□□ -1.36
UBR4-201ENST00000375218 DNAH3Q8TD57 4116 aa6.58□□□□□ -1.36
UBR4-201ENST00000375218 IGHV4-30-4P0DP06 118 aa6.58□□□□□ -1.36
UBR4-201ENST00000375218 LINC00242Q5T6M2 205 aa6.58□□□□□ -1.36
UBR4-201ENST00000375218 IL36RNQ9UBH0 155 aa6.58□□□□□ -1.36
UBR4-201ENST00000375218 PCNX1Q96RV3 2341 aa6.58□□□□□ -1.36
UBR4-201ENST00000375218 FHL2Q14192 279 aa6.57□□□□□ -1.36
UBR4-201ENST00000375218 ZFP2Q6ZN57 461 aa6.57□□□□□ -1.36
UBR4-201ENST00000375218 TSHBP01222 138 aa6.57□□□□□ -1.36
UBR4-201ENST00000375218 IL4P05112 153 aa6.57□□□□□ -1.36
UBR4-201ENST00000375218 RHOHQ15669 191 aa6.57□□□□□ -1.36
UBR4-201ENST00000375218 Q6ZR03 302 aa6.57□□□□□ -1.36
UBR4-201ENST00000375218 MGST1P10620 155 aaKnown RBP6.57□□□□□ -1.36
UBR4-201ENST00000375218 FXYD2P54710 66 aa6.57□□□□□ -1.36
UBR4-201ENST00000375218 UPK3BQ9BT76 320 aa6.57□□□□□ -1.36
UBR4-201ENST00000375218 PLCE1Q9P212 2302 aa6.56□□□□□ -1.36
UBR4-201ENST00000375218 IGHV1OR15-1A0A075B7D0 117 aa6.56□□□□□ -1.36
UBR4-201ENST00000375218 Q6P435 159 aa6.56□□□□□ -1.36
UBR4-201ENST00000375218 ARFGEF3Q5TH69 2177 aa6.56□□□□□ -1.36
UBR4-201ENST00000375218 MUC4Q99102 2169 aa6.56□□□□□ -1.36
UBR4-201ENST00000375218 HEATR1Q9H583 2144 aaKnown RBP6.56□□□□□ -1.36
UBR4-201ENST00000375218 EPG5Q9HCE0 2579 aa6.56□□□□□ -1.36
UBR4-201ENST00000375218 SMIM7Q9BQ49 75 aa6.56□□□□□ -1.36
UBR4-201ENST00000375218 ZNF702PQ9H963 129 aa6.56□□□□□ -1.36
UBR4-201ENST00000375218 IGHV1-24A0A0C4DH33 117 aa6.56□□□□□ -1.36
UBR4-201ENST00000375218 SPTA1P02549 2419 aa6.56□□□□□ -1.36
UBR4-201ENST00000375218 TREML4Q6UXN2 200 aa6.55□□□□□ -1.36
UBR4-201ENST00000375218 FXYD4P59646 89 aa6.55□□□□□ -1.36
UBR4-201ENST00000375218 SLC25A29Q8N8R3 303 aa6.55□□□□□ -1.36
UBR4-201ENST00000375218 KRTAP16-1A8MUX0 517 aa6.55□□□□□ -1.36
UBR4-201ENST00000375218 GCHFRP30047 84 aa6.55□□□□□ -1.36
UBR4-201ENST00000375218 FAM104BQ5XKR9 115 aa6.55□□□□□ -1.36
UBR4-201ENST00000375218 LINC01548A6NM66 108 aa6.54□□□□□ -1.36
UBR4-201ENST00000375218 CYCSP99999 105 aaKnown RBP6.54□□□□□ -1.36
UBR4-201ENST00000375218 RPL37AP8A6NKH3 93 aa6.54□□□□□ -1.36
UBR4-201ENST00000375218 IGLV2-14P01704 120 aa6.54□□□□□ -1.36
UBR4-201ENST00000375218 APCSP02743 223 aa6.54□□□□□ -1.36
UBR4-201ENST00000375218 ZNF32P17041 273 aa6.54□□□□□ -1.36
UBR4-201ENST00000375218 PI3P19957 117 aa6.54□□□□□ -1.36
UBR4-201ENST00000375218 CMC4P56277 68 aaPredicted RBP6.54□□□□□ -1.36
UBR4-201ENST00000375218 ICAM4Q14773 271 aa6.54□□□□□ -1.36
UBR4-201ENST00000375218 C8orf49Q96NF6 230 aa6.54□□□□□ -1.36
UBR4-201ENST00000375218 IGHV4-61A0A0C4DH41 118 aa6.54□□□□□ -1.36
UBR4-201ENST00000375218 A6NED7 52 aa6.54□□□□□ -1.36
UBR4-201ENST00000375218 IGHV4-59P01825 116 aa6.54□□□□□ -1.36
UBR4-201ENST00000375218 DEFA4P12838 97 aa6.54□□□□□ -1.36
UBR4-201ENST00000375218 C9orf106Q8NAJ2 232 aa6.54□□□□□ -1.36
UBR4-201ENST00000375218 RETNLBQ9BQ08 111 aa6.53□□□□□ -1.36
UBR4-201ENST00000375218 R4GMQ9 66 aa6.53□□□□□ -1.36
UBR4-201ENST00000375218 DOCK11Q5JSL3 2073 aa6.53□□□□□ -1.36
UBR4-201ENST00000375218 TENM1Q9UKZ4 2725 aa6.53□□□□□ -1.36
UBR4-201ENST00000375218 TMEM14DPA8MWL7 114 aa6.53□□□□□ -1.36
UBR4-201ENST00000375218 ADAMTSL4-AS1Q5T5F5 129 aa6.53□□□□□ -1.36
UBR4-201ENST00000375218 C20orf197Q8N268 126 aa6.53□□□□□ -1.36
UBR4-201ENST00000375218 ADM2Q7Z4H4 148 aa6.53□□□□□ -1.36
UBR4-201ENST00000375218 PEX7O00628 323 aa6.52□□□□□ -1.37
UBR4-201ENST00000375218 COX7A1P24310 79 aa6.52□□□□□ -1.37
UBR4-201ENST00000375218 SLC25A20O43772 301 aa6.52□□□□□ -1.37
UBR4-201ENST00000375218 IGKV1-39P01597 117 aa6.52□□□□□ -1.37
UBR4-201ENST00000375218 IGKV1D-39P04432 117 aa6.52□□□□□ -1.37
UBR4-201ENST00000375218 CHTF8P0CG12 524 aa6.52□□□□□ -1.37
UBR4-201ENST00000375218 FAM27BQ5VT28 67 aa6.52□□□□□ -1.37
UBR4-201ENST00000375218 ORMDL3Q8N138 153 aa6.52□□□□□ -1.37
UBR4-201ENST00000375218 FAM216BQ8N7L0 139 aa6.52□□□□□ -1.37
UBR4-201ENST00000375218 A0A1W2PPR1 153 aa6.52□□□□□ -1.37
UBR4-201ENST00000375218 IGHV3-43DP0DP04 118 aa6.52□□□□□ -1.37
UBR4-201ENST00000375218 CCL20P78556 96 aa6.52□□□□□ -1.37
UBR4-201ENST00000375218 C11orf94C9JXX5 98 aa6.51□□□□□ -1.37
UBR4-201ENST00000375218 FCER1GP30273 86 aa6.51□□□□□ -1.37
UBR4-201ENST00000375218 LY96Q9Y6Y9 160 aa6.51□□□□□ -1.37
UBR4-201ENST00000375218 BPESC1Q9GZL8 116 aa6.51□□□□□ -1.37
UBR4-201ENST00000375218 ARHGAP32A7KAX9 2087 aa6.51□□□□□ -1.37
UBR4-201ENST00000375218 SUPT4H1P63272 117 aaKnown RBP6.51□□□□□ -1.37
UBR4-201ENST00000375218 LINC00643Q86TS7 51 aa6.51□□□□□ -1.37
UBR4-201ENST00000375218 IGHV3-38A0A0C4DH36 116 aa6.5□□□□□ -1.37
UBR4-201ENST00000375218 URB1-AS1Q96HZ7 61 aa6.5□□□□□ -1.37
UBR4-201ENST00000375218 IGKV1-6A0A0C4DH72 117 aa6.5□□□□□ -1.37
UBR4-201ENST00000375218 MIR17HGQ75NE6 70 aa6.5□□□□□ -1.37
UBR4-201ENST00000375218 BBC3Q96PG8 261 aaPredicted RBP6.5□□□□□ -1.37
UBR4-201ENST00000375218 TRGV9Q99603 122 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms