RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 RPL36ALQ969Q0 106 aaKnown RBP7.84□□□□□ -1.15
HSPG2-202ENST00000374676 TRBV7-3A0A075B6L6 115 aa7.83□□□□□ -1.16
HSPG2-202ENST00000374676 A0A1B0GXF2 115 aa7.83□□□□□ -1.16
HSPG2-202ENST00000374676 S100A8P05109 93 aa7.83□□□□□ -1.16
HSPG2-202ENST00000374676 UBE2D3P61077 147 aa7.83□□□□□ -1.16
HSPG2-202ENST00000374676 UBE2D2P62837 147 aa7.83□□□□□ -1.16
HSPG2-202ENST00000374676 SVBPQ8N300 66 aa7.83□□□□□ -1.16
HSPG2-202ENST00000374676 NEXN-AS1Q8NBZ9 246 aa7.83□□□□□ -1.16
HSPG2-202ENST00000374676 DNAJC30Q96LL9 226 aa7.83□□□□□ -1.16
HSPG2-202ENST00000374676 UPK3BQ9BT76 320 aa7.83□□□□□ -1.16
HSPG2-202ENST00000374676 GTSF1LQ9H1H1 148 aa7.83□□□□□ -1.16
HSPG2-202ENST00000374676 MRPS16Q9Y3D3 137 aaKnown RBP7.83□□□□□ -1.16
HSPG2-202ENST00000374676 RYR2Q92736 4967 aa7.83□□□□□ -1.16
HSPG2-202ENST00000374676 SNAPINO95295 136 aa7.82□□□□□ -1.16
HSPG2-202ENST00000374676 HBBP68871 147 aa7.82□□□□□ -1.16
HSPG2-202ENST00000374676 MRPL54Q6P161 138 aaKnown RBP7.82□□□□□ -1.16
HSPG2-202ENST00000374676 RASL11AQ6T310 242 aa7.82□□□□□ -1.16
HSPG2-202ENST00000374676 GATD1Q8NB37 220 aa7.82□□□□□ -1.16
HSPG2-202ENST00000374676 BTF3L4Q96K17 158 aa7.82□□□□□ -1.16
HSPG2-202ENST00000374676 NIT2Q9NQR4 276 aa7.82□□□□□ -1.16
HSPG2-202ENST00000374676 HYDINQ4G0P3 5121 aa7.81□□□□□ -1.16
HSPG2-202ENST00000374676 TRAV9-1A0A075B6T8 112 aa7.81□□□□□ -1.16
HSPG2-202ENST00000374676 RAB4AP20338 218 aa7.81□□□□□ -1.16
HSPG2-202ENST00000374676 CAMPP49913 170 aa7.81□□□□□ -1.16
HSPG2-202ENST00000374676 FAM104BQ5XKR9 115 aa7.81□□□□□ -1.16
HSPG2-202ENST00000374676 KCNIP4Q6PIL6 250 aa7.81□□□□□ -1.16
HSPG2-202ENST00000374676 RNF185Q96GF1 192 aa7.81□□□□□ -1.16
HSPG2-202ENST00000374676 RPS10P5Q9NQ39 176 aa7.81□□□□□ -1.16
HSPG2-202ENST00000374676 TNFRSF18Q9Y5U5 241 aa7.81□□□□□ -1.16
HSPG2-202ENST00000374676 AMN1Q8IY45 258 aa7.8□□□□□ -1.16
HSPG2-202ENST00000374676 MRAP2Q96G30 205 aa7.8□□□□□ -1.16
HSPG2-202ENST00000374676 S100PP25815 95 aa7.79□□□□□ -1.16
HSPG2-202ENST00000374676 LELP1Q5T871 98 aa7.79□□□□□ -1.16
HSPG2-202ENST00000374676 DAZ4Q86SG3 579 aaKnown RBP7.79□□□□□ -1.16
HSPG2-202ENST00000374676 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.79□□□□□ -1.16
HSPG2-202ENST00000374676 Q9H8V8 135 aa7.79□□□□□ -1.16
HSPG2-202ENST00000374676 DAZ3Q9NR90 486 aaKnown RBP7.79□□□□□ -1.16
HSPG2-202ENST00000374676 RYR3Q15413 4870 aa7.78□□□□□ -1.16
HSPG2-202ENST00000374676 TRAV26-2A0A0B4J265 109 aa7.78□□□□□ -1.16
HSPG2-202ENST00000374676 TRBV6-5A0A0K0K1A5 114 aa7.78□□□□□ -1.16
HSPG2-202ENST00000374676 PPP1R17O96001 155 aa7.78□□□□□ -1.16
HSPG2-202ENST00000374676 MRPL51Q4U2R6 128 aaKnown RBP7.78□□□□□ -1.16
HSPG2-202ENST00000374676 TMEM97Q5BJF2 176 aa7.78□□□□□ -1.16
HSPG2-202ENST00000374676 DNAH10Q8IVF4 4471 aa7.77□□□□□ -1.17
HSPG2-202ENST00000374676 TRAV8-6A0A0B4J262 113 aa7.77□□□□□ -1.17
HSPG2-202ENST00000374676 SIVA1O15304 175 aa7.77□□□□□ -1.17
HSPG2-202ENST00000374676 OR10J3Q5JRS4 329 aa7.77□□□□□ -1.17
HSPG2-202ENST00000374676 RPL39LQ96EH5 51 aaKnown RBP7.77□□□□□ -1.17
HSPG2-202ENST00000374676 DNAH17Q9UFH2 4485 aa7.77□□□□□ -1.17
HSPG2-202ENST00000374676 GAS8-AS1O95177 125 aa7.76□□□□□ -1.17
HSPG2-202ENST00000374676 PPBPP02775 128 aa7.76□□□□□ -1.17
HSPG2-202ENST00000374676 COX19Q49B96 90 aa7.76□□□□□ -1.17
HSPG2-202ENST00000374676 URGCP-MRPS24S4R325 110 aa7.76□□□□□ -1.17
HSPG2-202ENST00000374676 DNAH2Q9P225 4427 aa7.76□□□□□ -1.17
HSPG2-202ENST00000374676 IGLV2-18A0A075B6J9 118 aa7.75□□□□□ -1.17
HSPG2-202ENST00000374676 TRBV24-1A0A075B6N3 115 aa7.75□□□□□ -1.17
HSPG2-202ENST00000374676 TRBV6-8A0A0A6YYG3 113 aa7.75□□□□□ -1.17
HSPG2-202ENST00000374676 IGHV3-38A0A0C4DH36 116 aa7.75□□□□□ -1.17
HSPG2-202ENST00000374676 NBDYA0A0U1RRE5 68 aa7.75□□□□□ -1.17
HSPG2-202ENST00000374676 SDHAF1A6NFY7 115 aa7.75□□□□□ -1.17
HSPG2-202ENST00000374676 SMKR1H3BMG3 65 aa7.75□□□□□ -1.17
HSPG2-202ENST00000374676 K7EP13 123 aa7.75□□□□□ -1.17
HSPG2-202ENST00000374676 DNAH10OSP0CZ25 163 aa7.75□□□□□ -1.17
HSPG2-202ENST00000374676 CKS2P33552 79 aa7.75□□□□□ -1.17
HSPG2-202ENST00000374676 POLR2KP53803 58 aaKnown RBP7.75□□□□□ -1.17
HSPG2-202ENST00000374676 ATRAIDQ6UW56 229 aa7.75□□□□□ -1.17
HSPG2-202ENST00000374676 Q6ZR54 194 aa7.75□□□□□ -1.17
HSPG2-202ENST00000374676 WFDC10BQ8IUB3 73 aa7.75□□□□□ -1.17
HSPG2-202ENST00000374676 NRACQ8N912 160 aa7.75□□□□□ -1.17
HSPG2-202ENST00000374676 ST20Q9HBF5 79 aa7.75□□□□□ -1.17
HSPG2-202ENST00000374676 PHOX2AO14813 284 aa7.74□□□□□ -1.17
HSPG2-202ENST00000374676 NCR2O95944 276 aa7.74□□□□□ -1.17
HSPG2-202ENST00000374676 RPS10P46783 165 aaKnown RBP7.74□□□□□ -1.17
HSPG2-202ENST00000374676 TMEM136Q6ZRR5 245 aa7.74□□□□□ -1.17
HSPG2-202ENST00000374676 NTM-AS1Q6ZSK4 140 aa7.74□□□□□ -1.17
HSPG2-202ENST00000374676 TRAV9-2A0A087WT02 112 aa7.73□□□□□ -1.17
HSPG2-202ENST00000374676 D6R8Y8 96 aa7.73□□□□□ -1.17
HSPG2-202ENST00000374676 I3L3M4 83 aa7.73□□□□□ -1.17
HSPG2-202ENST00000374676 RPL32P62910 135 aaKnown RBP7.73□□□□□ -1.17
HSPG2-202ENST00000374676 ELOBQ15370 118 aa7.73□□□□□ -1.17
HSPG2-202ENST00000374676 IQCJQ1A5X6 159 aa7.73□□□□□ -1.17
HSPG2-202ENST00000374676 TTC32Q5I0X7 151 aa7.73□□□□□ -1.17
HSPG2-202ENST00000374676 LINC01556Q5JQF7 62 aa7.73□□□□□ -1.17
HSPG2-202ENST00000374676 ORMDL3Q8N138 153 aa7.73□□□□□ -1.17
HSPG2-202ENST00000374676 C20orf78Q9BR46 151 aa7.73□□□□□ -1.17
HSPG2-202ENST00000374676 TMEM70Q9BUB7 260 aa7.73□□□□□ -1.17
HSPG2-202ENST00000374676 GNB1LQ9BYB4 327 aa7.73□□□□□ -1.17
HSPG2-202ENST00000374676 TRBV25-1A0A075B6N4 114 aa7.72□□□□□ -1.17
HSPG2-202ENST00000374676 TRBV27A0A0K0K1C4 114 aa7.72□□□□□ -1.17
HSPG2-202ENST00000374676 M0R2N4 97 aa7.72□□□□□ -1.17
HSPG2-202ENST00000374676 VCYO14598 125 aa7.72□□□□□ -1.17
HSPG2-202ENST00000374676 TNFRSF6BO95407 300 aa7.72□□□□□ -1.17
HSPG2-202ENST00000374676 HLA-DQA1P01909 254 aa7.72□□□□□ -1.17
HSPG2-202ENST00000374676 BTF3P20290 206 aaKnown RBP7.72□□□□□ -1.17
HSPG2-202ENST00000374676 SUMO2P61956 95 aaKnown RBP7.72□□□□□ -1.17
HSPG2-202ENST00000374676 COTL1Q14019 142 aa7.72□□□□□ -1.17
HSPG2-202ENST00000374676 NIT1Q86X76 327 aa7.72□□□□□ -1.17
HSPG2-202ENST00000374676 CHCHD7Q9BUK0 85 aa7.72□□□□□ -1.17
HSPG2-202ENST00000374676 LAMTOR2Q9Y2Q5 125 aa7.72□□□□□ -1.17
HSPG2-202ENST00000374676 TGIF2-C20orf24A0A0A6YYL0 155 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms