RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 SFTA2Q6UW10 78 aa6.22□□□□□ -1.41
GARNL3-201ENST00000373386 PRR26Q8N8Z3 221 aa6.22□□□□□ -1.41
GARNL3-201ENST00000373386 PLAC8L1A1L4L8 177 aa6.21□□□□□ -1.41
GARNL3-201ENST00000373386 MRPL51Q4U2R6 128 aaKnown RBP6.21□□□□□ -1.41
GARNL3-201ENST00000373386 F8W735 103 aaPredicted RBP6.21□□□□□ -1.42
GARNL3-201ENST00000373386 K7EMT4 169 aa6.21□□□□□ -1.42
GARNL3-201ENST00000373386 M0R3E3 92 aa6.21□□□□□ -1.42
GARNL3-201ENST00000373386 PAX8Q06710 450 aa6.21□□□□□ -1.42
GARNL3-201ENST00000373386 DEFB121Q5J5C9 76 aa6.21□□□□□ -1.42
GARNL3-201ENST00000373386 LINC01560Q8TB33 94 aa6.21□□□□□ -1.42
GARNL3-201ENST00000373386 CKS2P33552 79 aa6.21□□□□□ -1.42
GARNL3-201ENST00000373386 TTTY13Q9BZ97 58 aa6.21□□□□□ -1.42
GARNL3-201ENST00000373386 MALRD1Q5VYJ5 2156 aa6.2□□□□□ -1.42
GARNL3-201ENST00000373386 TRBV10-2A0A0K0K1G8 114 aa6.2□□□□□ -1.42
GARNL3-201ENST00000373386 LINC01546A6NGU7 62 aa6.2□□□□□ -1.42
GARNL3-201ENST00000373386 ATXN8Q156A1 80 aa6.2□□□□□ -1.42
GARNL3-201ENST00000373386 CNFNQ9BYD5 112 aa6.2□□□□□ -1.42
GARNL3-201ENST00000373386 KALRNO60229 2985 aa6.2□□□□□ -1.42
GARNL3-201ENST00000373386 LINC01559Q495D7 138 aa6.2□□□□□ -1.42
GARNL3-201ENST00000373386 LYNX1G3V0Z9 82 aa6.19□□□□□ -1.42
GARNL3-201ENST00000373386 IGHG2P01859 326 aa6.19□□□□□ -1.42
GARNL3-201ENST00000373386 LYNX1P0DP58 116 aa6.19□□□□□ -1.42
GARNL3-201ENST00000373386 SS18Q15532 418 aa6.19□□□□□ -1.42
GARNL3-201ENST00000373386 TWIST1Q15672 202 aa6.19□□□□□ -1.42
GARNL3-201ENST00000373386 NSUN5P1Q3KNT7 163 aa6.19□□□□□ -1.42
GARNL3-201ENST00000373386 C9orf139Q6ZV77 190 aa6.19□□□□□ -1.42
GARNL3-201ENST00000373386 VMO1Q7Z5L0 202 aa6.19□□□□□ -1.42
GARNL3-201ENST00000373386 TLN1Q9Y490 2541 aaKnown RBP6.19□□□□□ -1.42
GARNL3-201ENST00000373386 BEAN1Q3B7T3 259 aa6.19□□□□□ -1.42
GARNL3-201ENST00000373386 PRR25Q96S07 402 aa6.19□□□□□ -1.42
GARNL3-201ENST00000373386 METTL26Q96S19 204 aa6.19□□□□□ -1.42
GARNL3-201ENST00000373386 ATRXP46100 2492 aa6.19□□□□□ -1.42
GARNL3-201ENST00000373386 MAP1BP46821 2468 aaKnown RBP6.19□□□□□ -1.42
GARNL3-201ENST00000373386 PRB3Q04118 309 aaPredicted RBP6.19□□□□□ -1.42
GARNL3-201ENST00000373386 IGKV2-40A0A087WW87 121 aaPredicted RBP6.18□□□□□ -1.42
GARNL3-201ENST00000373386 TIMM17BO60830 172 aa6.18□□□□□ -1.42
GARNL3-201ENST00000373386 IGKV2D-40P01614 121 aaPredicted RBP6.18□□□□□ -1.42
GARNL3-201ENST00000373386 EGR2P11161 476 aaPredicted RBP6.18□□□□□ -1.42
GARNL3-201ENST00000373386 MOB4Q9Y3A3 225 aa6.18□□□□□ -1.42
GARNL3-201ENST00000373386 ZGRF1Q86YA3 2104 aa6.18□□□□□ -1.42
GARNL3-201ENST00000373386 AGRNO00468 2067 aa6.18□□□□□ -1.42
GARNL3-201ENST00000373386 PSMG3-AS1Q96PY0 264 aa6.18□□□□□ -1.42
GARNL3-201ENST00000373386 DKK2Q9UBU2 259 aa6.18□□□□□ -1.42
GARNL3-201ENST00000373386 SMKR1H3BMG3 65 aa6.17□□□□□ -1.42
GARNL3-201ENST00000373386 CTSGP08311 255 aa6.17□□□□□ -1.42
GARNL3-201ENST00000373386 PRB4P10163 310 aaPredicted RBP6.17□□□□□ -1.42
GARNL3-201ENST00000373386 FXYD7P58549 80 aa6.17□□□□□ -1.42
GARNL3-201ENST00000373386 CFHR3Q02985 330 aa6.17□□□□□ -1.42
GARNL3-201ENST00000373386 TPRP12270 2363 aaKnown RBP6.17□□□□□ -1.42
GARNL3-201ENST00000373386 IGHV7-81A0A0B4J1V7 117 aa6.17□□□□□ -1.42
GARNL3-201ENST00000373386 CRIP2P52943 208 aaPredicted RBP6.17□□□□□ -1.42
GARNL3-201ENST00000373386 FHL2Q14192 279 aa6.17□□□□□ -1.42
GARNL3-201ENST00000373386 C2orf82Q6UX34 121 aa6.17□□□□□ -1.42
GARNL3-201ENST00000373386 Q8N9W7 124 aa6.17□□□□□ -1.42
GARNL3-201ENST00000373386 SLC50A1Q9BRV3 221 aa6.17□□□□□ -1.42
GARNL3-201ENST00000373386 IGHV1-58A0A0C4DH39 117 aa6.16□□□□□ -1.42
GARNL3-201ENST00000373386 ZNF22P17026 224 aaPredicted RBP6.16□□□□□ -1.42
GARNL3-201ENST00000373386 NDUFA11Q86Y39 141 aa6.16□□□□□ -1.42
GARNL3-201ENST00000373386 RNF185Q96GF1 192 aa6.16□□□□□ -1.42
GARNL3-201ENST00000373386 PKD1L2Q7Z442 2459 aa6.16□□□□□ -1.42
GARNL3-201ENST00000373386 NDPQ00604 133 aa6.16□□□□□ -1.42
GARNL3-201ENST00000373386 C11orf68Q9H3H3 251 aaKnown RBP6.16□□□□□ -1.42
GARNL3-201ENST00000373386 S4R3C0 116 aa6.16□□□□□ -1.42
GARNL3-201ENST00000373386 LGALS3P17931 250 aaKnown RBP6.16□□□□□ -1.42
GARNL3-201ENST00000373386 Q8TAT8 98 aa6.16□□□□□ -1.42
GARNL3-201ENST00000373386 DCANP1Q8TF63 244 aa6.16□□□□□ -1.42
GARNL3-201ENST00000373386 TM2D3Q9BRN9 247 aa6.16□□□□□ -1.42
GARNL3-201ENST00000373386 ACACBO00763 2458 aa6.16□□□□□ -1.42
GARNL3-201ENST00000373386 TRBV7-1A0A0A6YYK4 115 aa6.15□□□□□ -1.42
GARNL3-201ENST00000373386 C8orf87E5RJ46 101 aa6.15□□□□□ -1.42
GARNL3-201ENST00000373386 ZNF80P51504 273 aaPredicted RBP6.15□□□□□ -1.42
GARNL3-201ENST00000373386 KTN1-AS1Q86SY8 53 aa6.15□□□□□ -1.42
GARNL3-201ENST00000373386 MAPKAPK5-AS1Q8N8E1 139 aa6.15□□□□□ -1.42
GARNL3-201ENST00000373386 ZFAND3Q9H8U3 227 aa6.15□□□□□ -1.42
GARNL3-201ENST00000373386 SMAD5-AS1Q9Y6J3 95 aa6.15□□□□□ -1.42
GARNL3-201ENST00000373386 ADGRG4Q8IZF6 3080 aa6.15□□□□□ -1.43
GARNL3-201ENST00000373386 DAD1P61803 113 aa6.15□□□□□ -1.43
GARNL3-201ENST00000373386 PRSS1P07477 247 aa6.14□□□□□ -1.43
GARNL3-201ENST00000373386 DYNAPQ8N1N2 210 aa6.14□□□□□ -1.43
GARNL3-201ENST00000373386 A0A0B4J2C4 111 aa6.14□□□□□ -1.43
GARNL3-201ENST00000373386 Q8N8P6 123 aa6.14□□□□□ -1.43
GARNL3-201ENST00000373386 LENEPQ9Y5L5 61 aa6.14□□□□□ -1.43
GARNL3-201ENST00000373386 POLEQ07864 2286 aa6.14□□□□□ -1.43
GARNL3-201ENST00000373386 USP24Q9UPU5 2620 aa6.14□□□□□ -1.43
GARNL3-201ENST00000373386 ZFP36P26651 326 aaKnown RBP6.14□□□□□ -1.43
GARNL3-201ENST00000373386 ECSCRQ19T08 205 aa6.14□□□□□ -1.43
GARNL3-201ENST00000373386 IGHV4-4A0A075B6R2 117 aa6.13□□□□□ -1.43
GARNL3-201ENST00000373386 CCL24O00175 119 aa6.13□□□□□ -1.43
GARNL3-201ENST00000373386 ATP5EP56381 51 aaPredicted RBP6.13□□□□□ -1.43
GARNL3-201ENST00000373386 C19orf54Q5BKX5 351 aa6.13□□□□□ -1.43
GARNL3-201ENST00000373386 ZNF575Q86XF7 245 aa6.13□□□□□ -1.43
GARNL3-201ENST00000373386 MSRB1Q9NZV6 116 aa6.13□□□□□ -1.43
GARNL3-201ENST00000373386 FAM223BA6NKX1 122 aa6.13□□□□□ -1.43
GARNL3-201ENST00000373386 FAM223AQ8IWN6 122 aa6.13□□□□□ -1.43
GARNL3-201ENST00000373386 PRO1854Q9UHT4 67 aa6.13□□□□□ -1.43
GARNL3-201ENST00000373386 H3BUA1 57 aa6.12□□□□□ -1.43
GARNL3-201ENST00000373386 CIRBPQ14011 172 aaKnown RBP6.12□□□□□ -1.43
GARNL3-201ENST00000373386 UNQ9165/PRO28630Q6UXU0 137 aa6.12□□□□□ -1.43
GARNL3-201ENST00000373386 SDIM1Q6ZPB5 146 aa6.12□□□□□ -1.43
GARNL3-201ENST00000373386 RP1L1Q8IWN7 2480 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms