RNA–Protein interactions for RNA: ENST00000372856.7

PABPC4-201, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC4, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-201ENST00000372856 FAM19A5Q7Z5A7 132 aaPredicted RBP11.89□□□□□ -0.51
PABPC4-201ENST00000372856 CELSR2Q9HCU4 2923 aa11.89□□□□□ -0.51
PABPC4-201ENST00000372856 FAM236AA0A1B0GUQ0 79 aa11.89□□□□□ -0.51
PABPC4-201ENST00000372856 FAM236BA0A1B0GV22 79 aa11.89□□□□□ -0.51
PABPC4-201ENST00000372856 C19orf54Q5BKX5 351 aa11.89□□□□□ -0.51
PABPC4-201ENST00000372856 DNAJC30Q96LL9 226 aa11.89□□□□□ -0.51
PABPC4-201ENST00000372856 RNASE3P12724 160 aaKnown RBP11.88□□□□□ -0.51
PABPC4-201ENST00000372856 DUX3Q96PT4 197 aa11.88□□□□□ -0.51
PABPC4-201ENST00000372856 EDA2RQ9HAV5 297 aa11.88□□□□□ -0.51
PABPC4-201ENST00000372856 DUSP14O95147 198 aaKnown RBP11.88□□□□□ -0.51
PABPC4-201ENST00000372856 DOPEY2Q9Y3R5 2298 aa11.88□□□□□ -0.51
PABPC4-201ENST00000372856 NDUFA4O00483 81 aa11.87□□□□□ -0.51
PABPC4-201ENST00000372856 JPT2Q9H910 190 aa11.87□□□□□ -0.51
PABPC4-201ENST00000372856 TRGV11A0A075B6L2 103 aa11.86□□□□□ -0.51
PABPC4-201ENST00000372856 A0A0J9YY99 117 aa11.86□□□□□ -0.51
PABPC4-201ENST00000372856 H3BMM0 161 aa11.86□□□□□ -0.51
PABPC4-201ENST00000372856 CEMP1Q6PRD7 247 aaPredicted RBP11.86□□□□□ -0.51
PABPC4-201ENST00000372856 UBE2WQ96B02 151 aa11.86□□□□□ -0.51
PABPC4-201ENST00000372856 HERVK_113P61574 105 aa11.86□□□□□ -0.51
PABPC4-201ENST00000372856 SPANXA1Q9NS26 97 aa11.86□□□□□ -0.51
PABPC4-201ENST00000372856 FAM208BQ5VWN6 2430 aa11.85□□□□□ -0.51
PABPC4-201ENST00000372856 EDN2P20800 178 aa11.85□□□□□ -0.51
PABPC4-201ENST00000372856 HERVK_113P63121 156 aa11.85□□□□□ -0.51
PABPC4-201ENST00000372856 RHPN1-AS1Q9BWJ2 59 aa11.85□□□□□ -0.51
PABPC4-201ENST00000372856 LINC01620Q4KN68 170 aa11.85□□□□□ -0.51
PABPC4-201ENST00000372856 USP9YO00507 2555 aaPredicted RBP11.85□□□□□ -0.51
PABPC4-201ENST00000372856 IGHV1-69DA0A0B4J2H0 117 aa11.84□□□□□ -0.51
PABPC4-201ENST00000372856 A4D1N5 150 aa11.84□□□□□ -0.51
PABPC4-201ENST00000372856 IGHV1-69P01742 117 aa11.84□□□□□ -0.51
PABPC4-201ENST00000372856 PMVKQ15126 192 aa11.84□□□□□ -0.51
PABPC4-201ENST00000372856 ITPR1Q14643 2758 aa11.84□□□□□ -0.51
PABPC4-201ENST00000372856 A0A087WWL8 130 aa11.84□□□□□ -0.51
PABPC4-201ENST00000372856 IGHV3-30P01768 117 aa11.84□□□□□ -0.51
PABPC4-201ENST00000372856 CRYGDP07320 174 aa11.84□□□□□ -0.51
PABPC4-201ENST00000372856 IGHV3-30-5P0DP03 117 aa11.84□□□□□ -0.51
PABPC4-201ENST00000372856 BLCAPP62952 87 aa11.84□□□□□ -0.51
PABPC4-201ENST00000372856 FAM19A4Q96LR4 140 aa11.84□□□□□ -0.51
PABPC4-201ENST00000372856 TP53TG1Q9Y2A0 90 aa11.84□□□□□ -0.51
PABPC4-201ENST00000372856 TRAV25A0A0B4J276 109 aa11.83□□□□□ -0.52
PABPC4-201ENST00000372856 C11orf86A6NJI1 115 aa11.83□□□□□ -0.52
PABPC4-201ENST00000372856 LGALS9O00182 355 aa11.83□□□□□ -0.52
PABPC4-201ENST00000372856 IGHV4-38-2P0DP08 117 aa11.83□□□□□ -0.52
PABPC4-201ENST00000372856 COX6B1P14854 86 aa11.83□□□□□ -0.52
PABPC4-201ENST00000372856 RPL39P62891 51 aaKnown RBP11.83□□□□□ -0.52
PABPC4-201ENST00000372856 C2orf82Q6UX34 121 aa11.83□□□□□ -0.52
PABPC4-201ENST00000372856 MYO18BQ8IUG5 2567 aa11.83□□□□□ -0.52
PABPC4-201ENST00000372856 C19orf84I3L1E1 186 aa11.83□□□□□ -0.52
PABPC4-201ENST00000372856 TSHBP01222 138 aa11.83□□□□□ -0.52
PABPC4-201ENST00000372856 F5H697 171 aa11.82□□□□□ -0.52
PABPC4-201ENST00000372856 NDUFA7O95182 113 aa11.82□□□□□ -0.52
PABPC4-201ENST00000372856 ZNF22P17026 224 aaPredicted RBP11.82□□□□□ -0.52
PABPC4-201ENST00000372856 LINC00315P59091 139 aa11.82□□□□□ -0.52
PABPC4-201ENST00000372856 LY6DQ14210 128 aa11.82□□□□□ -0.52
PABPC4-201ENST00000372856 ABCA2Q9BZC7 2435 aa11.82□□□□□ -0.52
PABPC4-201ENST00000372856 MUC4Q99102 2169 aa11.82□□□□□ -0.52
PABPC4-201ENST00000372856 H3BUX3 64 aa11.82□□□□□ -0.52
PABPC4-201ENST00000372856 UCNP55089 124 aa11.82□□□□□ -0.52
PABPC4-201ENST00000372856 KIF25-AS1Q9Y6Z4 181 aa11.81□□□□□ -0.52
PABPC4-201ENST00000372856 MED14OSP0DP75 135 aa11.81□□□□□ -0.52
PABPC4-201ENST00000372856 ATXN8Q156A1 80 aa11.81□□□□□ -0.52
PABPC4-201ENST00000372856 TMEM170BQ5T4T1 132 aa11.81□□□□□ -0.52
PABPC4-201ENST00000372856 FLNCQ14315 2725 aa11.81□□□□□ -0.52
PABPC4-201ENST00000372856 IGHV3-33P01772 117 aa11.81□□□□□ -0.52
PABPC4-201ENST00000372856 TSPEAR-AS2P59090 65 aa11.81□□□□□ -0.52
PABPC4-201ENST00000372856 SUMO4Q6EEV6 95 aa11.81□□□□□ -0.52
PABPC4-201ENST00000372856 IGLV4-69A0A075B6H9 119 aa11.8□□□□□ -0.52
PABPC4-201ENST00000372856 TRAV12-3A0A0B4J271 114 aa11.8□□□□□ -0.52
PABPC4-201ENST00000372856 IGHV4-61A0A0C4DH41 118 aa11.8□□□□□ -0.52
PABPC4-201ENST00000372856 PPP1R17O96001 155 aa11.8□□□□□ -0.52
PABPC4-201ENST00000372856 FAM74A4Q5TZK3 123 aa11.8□□□□□ -0.52
PABPC4-201ENST00000372856 APRG1Q8IVJ8 170 aa11.8□□□□□ -0.52
PABPC4-201ENST00000372856 USMG5Q96IX5 58 aa11.8□□□□□ -0.52
PABPC4-201ENST00000372856 NOTCH3Q9UM47 2321 aa11.8□□□□□ -0.52
PABPC4-201ENST00000372856 J3KT08 172 aa11.8□□□□□ -0.52
PABPC4-201ENST00000372856 TLN2Q9Y4G6 2542 aa11.8□□□□□ -0.52
PABPC4-201ENST00000372856 EIF4EBP3O60516 100 aaPredicted RBP11.79□□□□□ -0.52
PABPC4-201ENST00000372856 IGKV3-20P01619 116 aa11.79□□□□□ -0.52
PABPC4-201ENST00000372856 IGHG2P01859 326 aa11.79□□□□□ -0.52
PABPC4-201ENST00000372856 ACACBO00763 2458 aa11.79□□□□□ -0.52
PABPC4-201ENST00000372856 SETD2Q9BYW2 2564 aaPredicted RBP11.79□□□□□ -0.52
PABPC4-201ENST00000372856 IGHV3-64A0A075B6Q5 118 aa11.78□□□□□ -0.52
PABPC4-201ENST00000372856 IGIPA6NJ69 53 aa11.78□□□□□ -0.52
PABPC4-201ENST00000372856 TMEM101Q96IK0 257 aa11.78□□□□□ -0.52
PABPC4-201ENST00000372856 DAZ1Q9NQZ3 744 aaKnown RBP11.78□□□□□ -0.52
PABPC4-201ENST00000372856 POLR2KP53803 58 aaKnown RBP11.78□□□□□ -0.52
PABPC4-201ENST00000372856 SDHAF1A6NFY7 115 aa11.78□□□□□ -0.52
PABPC4-201ENST00000372856 ZNF256Q9Y2P7 627 aaPredicted RBP11.78□□□□□ -0.52
PABPC4-201ENST00000372856 IGHV4OR15-8A0A075B7B6 117 aa11.77□□□□□ -0.52
PABPC4-201ENST00000372856 A0A087WW49 117 aa11.77□□□□□ -0.52
PABPC4-201ENST00000372856 KLLNB2CW77 178 aa11.77□□□□□ -0.52
PABPC4-201ENST00000372856 NXPH4O95158 308 aa11.77□□□□□ -0.52
PABPC4-201ENST00000372856 C3orf22Q8N5N4 141 aa11.77□□□□□ -0.52
PABPC4-201ENST00000372856 SLC25A29Q8N8R3 303 aa11.77□□□□□ -0.52
PABPC4-201ENST00000372856 TRBV10-2A0A0K0K1G8 114 aa11.77□□□□□ -0.53
PABPC4-201ENST00000372856 POM121L12Q8N7R1 296 aa11.77□□□□□ -0.53
PABPC4-201ENST00000372856 VCYO14598 125 aa11.76□□□□□ -0.53
PABPC4-201ENST00000372856 RPL13AP40429 203 aaKnown RBP11.76□□□□□ -0.53
PABPC4-201ENST00000372856 TRAV12-2A0A075B6T6 113 aa11.76□□□□□ -0.53
PABPC4-201ENST00000372856 OPRPNQ99935 248 aaPredicted RBP11.76□□□□□ -0.53
PABPC4-201ENST00000372856 ZANQ9Y493 2812 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms