RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 IGKV3-7A0A075B6H7 116 aa11.02□□□□□ -0.65
PRKN-204ENST00000366896 TRBV20-1A0A075B6N2 111 aa11.02□□□□□ -0.65
PRKN-204ENST00000366896 S100A4P26447 101 aaKnown RBP11.02□□□□□ -0.65
PRKN-204ENST00000366896 PHLDA3Q9Y5J5 127 aa11.02□□□□□ -0.65
PRKN-204ENST00000366896 TEX15Q9BXT5 2789 aa11.02□□□□□ -0.65
PRKN-204ENST00000366896 A0A0J9YY99 117 aa11.01□□□□□ -0.65
PRKN-204ENST00000366896 ANXA2RQ3ZCQ2 193 aa11.01□□□□□ -0.65
PRKN-204ENST00000366896 C14orf178Q8N769 122 aaPredicted RBP11.01□□□□□ -0.65
PRKN-204ENST00000366896 ERG28Q9UKR5 140 aa11.01□□□□□ -0.65
PRKN-204ENST00000366896 CRYGDP07320 174 aa11.01□□□□□ -0.65
PRKN-204ENST00000366896 ACANP16112 2415 aa11.01□□□□□ -0.65
PRKN-204ENST00000366896 IGHV4OR15-8A0A075B7B6 117 aa11□□□□□ -0.65
PRKN-204ENST00000366896 A0A087WW49 117 aa11□□□□□ -0.65
PRKN-204ENST00000366896 RPL11P62913 178 aaKnown RBP11□□□□□ -0.65
PRKN-204ENST00000366896 A6NDX4 124 aa11□□□□□ -0.65
PRKN-204ENST00000366896 A8MWV9 139 aa11□□□□□ -0.65
PRKN-204ENST00000366896 ZNF688P0C7X2 276 aa11□□□□□ -0.65
PRKN-204ENST00000366896 RNASE4P34096 147 aaKnown RBP11□□□□□ -0.65
PRKN-204ENST00000366896 ZNF580Q9UK33 172 aa11□□□□□ -0.65
PRKN-204ENST00000366896 IGLV4-69A0A075B6H9 119 aa10.99□□□□□ -0.65
PRKN-204ENST00000366896 C11orf86A6NJI1 115 aa10.99□□□□□ -0.65
PRKN-204ENST00000366896 GNRH2O43555 120 aa10.99□□□□□ -0.65
PRKN-204ENST00000366896 MGPP08493 103 aa10.99□□□□□ -0.65
PRKN-204ENST00000366896 RNASE3P12724 160 aaKnown RBP10.99□□□□□ -0.65
PRKN-204ENST00000366896 Q6ZS46 218 aa10.99□□□□□ -0.65
PRKN-204ENST00000366896 CYSRT1A8MQ03 144 aa10.99□□□□□ -0.65
PRKN-204ENST00000366896 CFC1BP0CG36 223 aa10.99□□□□□ -0.65
PRKN-204ENST00000366896 CFC1P0CG37 223 aa10.99□□□□□ -0.65
PRKN-204ENST00000366896 RNF183Q96D59 192 aa10.99□□□□□ -0.65
PRKN-204ENST00000366896 KLLNB2CW77 178 aa10.98□□□□□ -0.65
PRKN-204ENST00000366896 K7EMT4 169 aa10.98□□□□□ -0.65
PRKN-204ENST00000366896 DUSP14O95147 198 aaKnown RBP10.98□□□□□ -0.65
PRKN-204ENST00000366896 IGLV1-40P01703 118 aa10.98□□□□□ -0.65
PRKN-204ENST00000366896 IGHV3-30P01768 117 aa10.98□□□□□ -0.65
PRKN-204ENST00000366896 IGHV3-30-5P0DP03 117 aa10.98□□□□□ -0.65
PRKN-204ENST00000366896 EDN2P20800 178 aa10.98□□□□□ -0.65
PRKN-204ENST00000366896 HERVK_113P61574 105 aa10.98□□□□□ -0.65
PRKN-204ENST00000366896 PAPPA-AS1Q5QFB9 102 aa10.98□□□□□ -0.65
PRKN-204ENST00000366896 C10orf126Q8N4M7 172 aa10.98□□□□□ -0.65
PRKN-204ENST00000366896 YAE1D1Q9NRH1 226 aa10.98□□□□□ -0.65
PRKN-204ENST00000366896 TLN2Q9Y4G6 2542 aa10.98□□□□□ -0.65
PRKN-204ENST00000366896 TSHBP01222 138 aa10.98□□□□□ -0.65
PRKN-204ENST00000366896 SMR3AQ99954 134 aa10.98□□□□□ -0.65
PRKN-204ENST00000366896 KIF25-AS1Q9Y6Z4 181 aa10.98□□□□□ -0.65
PRKN-204ENST00000366896 H3BUX3 64 aa10.97□□□□□ -0.65
PRKN-204ENST00000366896 PF4V1P10720 104 aa10.97□□□□□ -0.65
PRKN-204ENST00000366896 SRD5A1P18405 259 aa10.97□□□□□ -0.65
PRKN-204ENST00000366896 ANKRD29Q8N6D5 301 aa10.97□□□□□ -0.65
PRKN-204ENST00000366896 DAZ1Q9NQZ3 744 aaKnown RBP10.97□□□□□ -0.65
PRKN-204ENST00000366896 LINC00315P59091 139 aa10.97□□□□□ -0.65
PRKN-204ENST00000366896 BLCAPP62952 87 aa10.97□□□□□ -0.65
PRKN-204ENST00000366896 SLC25A29Q8N8R3 303 aa10.97□□□□□ -0.65
PRKN-204ENST00000366896 RHPN1-AS1Q9BWJ2 59 aa10.97□□□□□ -0.65
PRKN-204ENST00000366896 TMEM262E9PQX1 116 aa10.96□□□□□ -0.65
PRKN-204ENST00000366896 ANK3Q12955 4377 aaKnown RBP10.96□□□□□ -0.65
PRKN-204ENST00000366896 IGIPA6NJ69 53 aa10.96□□□□□ -0.66
PRKN-204ENST00000366896 TEX29Q8N6K0 151 aa10.96□□□□□ -0.66
PRKN-204ENST00000366896 SETXQ7Z333 2677 aaKnown RBP10.95□□□□□ -0.66
PRKN-204ENST00000366896 LY6G6DO95868 133 aa10.95□□□□□ -0.66
PRKN-204ENST00000366896 TSPEAR-AS2P59090 65 aa10.95□□□□□ -0.66
PRKN-204ENST00000366896 CFHR3Q02985 330 aa10.95□□□□□ -0.66
PRKN-204ENST00000366896 KIR2DL4Q99706 377 aa10.95□□□□□ -0.66
PRKN-204ENST00000366896 PRO1854Q9UHT4 67 aa10.95□□□□□ -0.66
PRKN-204ENST00000366896 PMVKQ15126 192 aa10.95□□□□□ -0.66
PRKN-204ENST00000366896 DEFB112Q30KQ8 113 aa10.95□□□□□ -0.66
PRKN-204ENST00000366896 ZFAND6Q6FIF0 208 aa10.95□□□□□ -0.66
PRKN-204ENST00000366896 DEFB104AQ8WTQ1 72 aa10.95□□□□□ -0.66
PRKN-204ENST00000366896 ODF3Q96PU9 254 aa10.95□□□□□ -0.66
PRKN-204ENST00000366896 ANAPC13Q9BS18 74 aa10.95□□□□□ -0.66
PRKN-204ENST00000366896 M0QXV9 152 aa10.94□□□□□ -0.66
PRKN-204ENST00000366896 ID1P41134 155 aa10.94□□□□□ -0.66
PRKN-204ENST00000366896 POLR2KP53803 58 aaKnown RBP10.94□□□□□ -0.66
PRKN-204ENST00000366896 EMP1P54849 157 aa10.94□□□□□ -0.66
PRKN-204ENST00000366896 CITED1Q99966 193 aa10.94□□□□□ -0.66
PRKN-204ENST00000366896 TP53TG1Q9Y2A0 90 aa10.94□□□□□ -0.66
PRKN-204ENST00000366896 AMELXQ99217 191 aa10.94□□□□□ -0.66
PRKN-204ENST00000366896 SCGB1C2P0DMR2 95 aa10.93□□□□□ -0.66
PRKN-204ENST00000366896 MUC4Q99102 2169 aa10.93□□□□□ -0.66
PRKN-204ENST00000366896 TRBV6-5A0A0K0K1A5 114 aa10.93□□□□□ -0.66
PRKN-204ENST00000366896 TMEM141Q96I45 108 aa10.93□□□□□ -0.66
PRKN-204ENST00000366896 JPT2Q9H910 190 aa10.93□□□□□ -0.66
PRKN-204ENST00000366896 SONP18583 2426 aaKnown RBP10.92□□□□□ -0.66
PRKN-204ENST00000366896 SLC25A20O43772 301 aa10.92□□□□□ -0.66
PRKN-204ENST00000366896 DCANP1Q8TF63 244 aa10.92□□□□□ -0.66
PRKN-204ENST00000366896 TIMM17AQ99595 171 aa10.92□□□□□ -0.66
PRKN-204ENST00000366896 VCYO14598 125 aa10.92□□□□□ -0.66
PRKN-204ENST00000366896 TMEM95Q3KNT9 176 aa10.92□□□□□ -0.66
PRKN-204ENST00000366896 FAM159AQ6UWV7 190 aa10.92□□□□□ -0.66
PRKN-204ENST00000366896 GAGE5Q13069 117 aa10.91□□□□□ -0.66
PRKN-204ENST00000366896 GAGE6Q13070 117 aa10.91□□□□□ -0.66
PRKN-204ENST00000366896 TMEM170BQ5T4T1 132 aa10.91□□□□□ -0.66
PRKN-204ENST00000366896 ZNRF2Q8NHG8 242 aa10.91□□□□□ -0.66
PRKN-204ENST00000366896 TMEM89A2RUT3 159 aa10.9□□□□□ -0.66
PRKN-204ENST00000366896 J3QQQ9 107 aa10.9□□□□□ -0.66
PRKN-204ENST00000366896 LGALS9O00182 355 aa10.9□□□□□ -0.66
PRKN-204ENST00000366896 RPL39P62891 51 aaKnown RBP10.9□□□□□ -0.66
PRKN-204ENST00000366896 ZNF876PQ49A33 203 aa10.9□□□□□ -0.66
PRKN-204ENST00000366896 HIVEP1P15822 2718 aa10.9□□□□□ -0.66
PRKN-204ENST00000366896 TRBV27A0A0K0K1C4 114 aa10.9□□□□□ -0.67
PRKN-204ENST00000366896 C9JAW5 83 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms