RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 E9PLD3 99 aa16.67■□□□□ 0.26
LDB1-201ENST00000361198 YAE1D1Q9NRH1 226 aa16.67■□□□□ 0.26
LDB1-201ENST00000361198 G3V4G9 280 aa16.66■□□□□ 0.26
LDB1-201ENST00000361198 POLR2KP53803 58 aaKnown RBP16.66■□□□□ 0.26
LDB1-201ENST00000361198 LINC01549A6NIU2 74 aa16.65■□□□□ 0.26
LDB1-201ENST00000361198 RBMY1A1P0DJD3 496 aaKnown RBP16.65■□□□□ 0.26
LDB1-201ENST00000361198 RBMY1CP0DJD4 496 aa16.65■□□□□ 0.26
LDB1-201ENST00000361198 RBMY1FQ15415 496 aaKnown RBP16.65■□□□□ 0.26
LDB1-201ENST00000361198 C12orf74Q32Q52 190 aa16.65■□□□□ 0.26
LDB1-201ENST00000361198 DYNLRB2Q8TF09 96 aa16.65■□□□□ 0.26
LDB1-201ENST00000361198 HIST1H4GQ99525 98 aa16.65■□□□□ 0.26
LDB1-201ENST00000361198 IGLL5B9A064 214 aa16.65■□□□□ 0.26
LDB1-201ENST00000361198 SUMO4Q6EEV6 95 aa16.65■□□□□ 0.26
LDB1-201ENST00000361198 TRAV2A0A0B4J234 112 aa16.64■□□□□ 0.25
LDB1-201ENST00000361198 H3BMM0 161 aa16.64■□□□□ 0.25
LDB1-201ENST00000361198 DEFB114Q30KQ6 69 aa16.64■□□□□ 0.25
LDB1-201ENST00000361198 RAX2Q96IS3 184 aa16.64■□□□□ 0.25
LDB1-201ENST00000361198 A0A1B0GWB2 263 aa16.63■□□□□ 0.25
LDB1-201ENST00000361198 CYSLTR1Q9Y271 337 aa16.63■□□□□ 0.25
LDB1-201ENST00000361198 A0A1W2PRX2 142 aa16.63■□□□□ 0.25
LDB1-201ENST00000361198 CRYGDP07320 174 aa16.63■□□□□ 0.25
LDB1-201ENST00000361198 FAM74A4Q5TZK3 123 aa16.63■□□□□ 0.25
LDB1-201ENST00000361198 RBMY1BA6NDE4 496 aaKnown RBP16.62■□□□□ 0.25
LDB1-201ENST00000361198 RBMY1EA6NEQ0 496 aaKnown RBP16.62■□□□□ 0.25
LDB1-201ENST00000361198 IGIPA6NJ69 53 aa16.62■□□□□ 0.25
LDB1-201ENST00000361198 F5H697 171 aa16.62■□□□□ 0.25
LDB1-201ENST00000361198 RBMY1DP0C7P1 496 aaKnown RBP16.62■□□□□ 0.25
LDB1-201ENST00000361198 CD300EQ496F6 205 aaPredicted RBP16.62■□□□□ 0.25
LDB1-201ENST00000361198 A8MTW9 85 aa16.62■□□□□ 0.25
LDB1-201ENST00000361198 CD28P10747 220 aa16.62■□□□□ 0.25
LDB1-201ENST00000361198 PRADC1Q9BSG0 188 aa16.62■□□□□ 0.25
LDB1-201ENST00000361198 FASNP49327 2511 aaKnown RBP16.61■□□□□ 0.25
LDB1-201ENST00000361198 TSHBP01222 138 aa16.61■□□□□ 0.25
LDB1-201ENST00000361198 ZFP2Q6ZN57 461 aa16.61■□□□□ 0.25
LDB1-201ENST00000361198 SYT8Q8NBV8 401 aa16.61■□□□□ 0.25
LDB1-201ENST00000361198 MAP6D1Q9H9H5 199 aa16.61■□□□□ 0.25
LDB1-201ENST00000361198 VCYO14598 125 aa16.61■□□□□ 0.25
LDB1-201ENST00000361198 ZNF479Q96JC4 524 aa16.6■□□□□ 0.25
LDB1-201ENST00000361198 TRBV6-5A0A0K0K1A5 114 aa16.59■□□□□ 0.25
LDB1-201ENST00000361198 HTN1P15515 57 aa16.59■□□□□ 0.25
LDB1-201ENST00000361198 FHL3Q13643 280 aa16.59■□□□□ 0.25
LDB1-201ENST00000361198 TP53TG1Q9Y2A0 90 aa16.59■□□□□ 0.25
LDB1-201ENST00000361198 TRGV11A0A075B6L2 103 aa16.58■□□□□ 0.25
LDB1-201ENST00000361198 ZNF876PQ49A33 203 aa16.58■□□□□ 0.25
LDB1-201ENST00000361198 PAPPA-AS1Q5QFB9 102 aa16.58■□□□□ 0.25
LDB1-201ENST00000361198 ZNF256Q9Y2P7 627 aaPredicted RBP16.58■□□□□ 0.25
LDB1-201ENST00000361198 IGLV4-69A0A075B6H9 119 aa16.58■□□□□ 0.24
LDB1-201ENST00000361198 TRBV27A0A0K0K1C4 114 aa16.58■□□□□ 0.24
LDB1-201ENST00000361198 LINC01006Q8NI28 216 aa16.58■□□□□ 0.24
LDB1-201ENST00000361198 DEFB104AQ8WTQ1 72 aa16.58■□□□□ 0.24
LDB1-201ENST00000361198 KIR2DL4Q99706 377 aa16.58■□□□□ 0.24
LDB1-201ENST00000361198 GCN1Q92616 2671 aaKnown RBP16.57■□□□□ 0.24
LDB1-201ENST00000361198 CCL24O00175 119 aa16.57■□□□□ 0.24
LDB1-201ENST00000361198 RIPPLY3P57055 190 aa16.57■□□□□ 0.24
LDB1-201ENST00000361198 TMEM141Q96I45 108 aa16.57■□□□□ 0.24
LDB1-201ENST00000361198 TIMM17AQ99595 171 aa16.57■□□□□ 0.24
LDB1-201ENST00000361198 CITED2Q99967 270 aaPredicted RBP16.57■□□□□ 0.24
LDB1-201ENST00000361198 RNASE1P07998 156 aaKnown RBP16.57■□□□□ 0.24
LDB1-201ENST00000361198 COTL1Q14019 142 aa16.57■□□□□ 0.24
LDB1-201ENST00000361198 ZNF56Q15929 161 aa16.57■□□□□ 0.24
LDB1-201ENST00000361198 SDHAF1A6NFY7 115 aa16.56■□□□□ 0.24
LDB1-201ENST00000361198 PRM2P04554 102 aa16.56■□□□□ 0.24
LDB1-201ENST00000361198 PMVKQ15126 192 aa16.56■□□□□ 0.24
LDB1-201ENST00000361198 RRN3P1Q2M238 152 aa16.56■□□□□ 0.24
LDB1-201ENST00000361198 SPAG8Q99932 426 aaPredicted RBP16.56■□□□□ 0.24
LDB1-201ENST00000361198 C11orf86A6NJI1 115 aa16.55■□□□□ 0.24
LDB1-201ENST00000361198 ZNF815PA8K554 130 aa16.55■□□□□ 0.24
LDB1-201ENST00000361198 F8W1H4 67 aa16.54■□□□□ 0.24
LDB1-201ENST00000361198 M0QY20 66 aa16.54■□□□□ 0.24
LDB1-201ENST00000361198 MORN3Q6PF18 240 aaPredicted RBP16.54■□□□□ 0.24
LDB1-201ENST00000361198 RPL39P62891 51 aaKnown RBP16.53■□□□□ 0.24
LDB1-201ENST00000361198 HECTD1Q9ULT8 2610 aa16.53■□□□□ 0.24
LDB1-201ENST00000361198 C16orf95Q9H693 158 aa16.53■□□□□ 0.24
LDB1-201ENST00000361198 NIPBLQ6KC79 2804 aaeCLIP16.52■□□□□ 0.245e-6■□□□□ 10.2
LDB1-201ENST00000361198 SCGB2A2Q13296 93 aa16.52■□□□□ 0.24
LDB1-201ENST00000361198 ODF3L2Q3SX64 289 aa16.52■□□□□ 0.24
LDB1-201ENST00000361198 TSSC4Q9Y5U2 329 aaPredicted RBP16.52■□□□□ 0.24
LDB1-201ENST00000361198 PLEKHB2Q96CS7 222 aa16.51■□□□□ 0.23
LDB1-201ENST00000361198 TEX48A0A1B0GUV7 120 aa16.5■□□□□ 0.23
LDB1-201ENST00000361198 HERVK_113P61574 105 aa16.5■□□□□ 0.23
LDB1-201ENST00000361198 SMR3AQ99954 134 aa16.5■□□□□ 0.23
LDB1-201ENST00000361198 TRAV25A0A0B4J276 109 aa16.5■□□□□ 0.23
LDB1-201ENST00000361198 SCGB1D4Q6XE38 83 aa16.5■□□□□ 0.23
LDB1-201ENST00000361198 HIVEP2P31629 2446 aa16.5■□□□□ 0.23
LDB1-201ENST00000361198 RPL24P83731 157 aaKnown RBP16.49■□□□□ 0.23
LDB1-201ENST00000361198 TMEM238LA0A1B0GVL6 79 aa16.49■□□□□ 0.23
LDB1-201ENST00000361198 A6NJY4 79 aa16.49■□□□□ 0.23
LDB1-201ENST00000361198 H3BMG7 143 aa16.49■□□□□ 0.23
LDB1-201ENST00000361198 UBE2D1P51668 147 aa16.49■□□□□ 0.23
LDB1-201ENST00000361198 NSUN5P1Q3KNT7 163 aa16.48■□□□□ 0.23
LDB1-201ENST00000361198 WFDC2Q14508 124 aa16.48■□□□□ 0.23
LDB1-201ENST00000361198 RHOHQ15669 191 aa16.48■□□□□ 0.23
LDB1-201ENST00000361198 TRPT1Q86TN4 253 aaKnown RBP16.48■□□□□ 0.23
LDB1-201ENST00000361198 ZNF418Q8TF45 676 aaPredicted RBP16.48■□□□□ 0.23
LDB1-201ENST00000361198 NOTCH2Q04721 2471 aa16.48■□□□□ 0.23
LDB1-201ENST00000361198 EMP1P54849 157 aa16.47■□□□□ 0.23
LDB1-201ENST00000361198 HILS1P60008 231 aa16.47■□□□□ 0.23
LDB1-201ENST00000361198 LINC01587Q99440 93 aa16.47■□□□□ 0.23
LDB1-201ENST00000361198 SPANXB1Q9NS25 103 aaPredicted RBP16.47■□□□□ 0.23
LDB1-201ENST00000361198 A0A0J9YY99 117 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms