RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 H7C1H1 209 aa16.52■□□□□ 0.24
SDF4-202ENST00000360001 IGHV3-53P01767 116 aa16.52■□□□□ 0.24
SDF4-202ENST00000360001 PRB2P02812 416 aaPredicted RBP16.52■□□□□ 0.24
SDF4-202ENST00000360001 MIFP14174 115 aa16.52■□□□□ 0.24
SDF4-202ENST00000360001 RIPPLY3P57055 190 aa16.52■□□□□ 0.24
SDF4-202ENST00000360001 Q8NAQ8 132 aa16.52■□□□□ 0.24
SDF4-202ENST00000360001 NIT2Q9NQR4 276 aa16.52■□□□□ 0.24
SDF4-202ENST00000360001 TRGV2A0A075B6R0 118 aa16.51■□□□□ 0.23
SDF4-202ENST00000360001 A0A096LNJ9 63 aa16.51■□□□□ 0.23
SDF4-202ENST00000360001 LINC00612Q8N6U2 182 aa16.51■□□□□ 0.23
SDF4-202ENST00000360001 P0DMU3 169 aa16.51■□□□□ 0.23
SDF4-202ENST00000360001 FAM231AP0DMU4 169 aa16.51■□□□□ 0.23
SDF4-202ENST00000360001 FAM231CP0DMU5 169 aa16.51■□□□□ 0.23
SDF4-202ENST00000360001 POLR2KP53803 58 aaKnown RBP16.51■□□□□ 0.23
SDF4-202ENST00000360001 RPL32P62910 135 aaKnown RBP16.51■□□□□ 0.23
SDF4-202ENST00000360001 TMEM70Q9BUB7 260 aa16.51■□□□□ 0.23
SDF4-202ENST00000360001 SDHAF1A6NFY7 115 aa16.49■□□□□ 0.23
SDF4-202ENST00000360001 DEFB4AO15263 64 aa16.49■□□□□ 0.23
SDF4-202ENST00000360001 TCAPO15273 167 aa16.49■□□□□ 0.23
SDF4-202ENST00000360001 Q9UF83 564 aa16.49■□□□□ 0.23
SDF4-202ENST00000360001 TP53TG1Q9Y2A0 90 aa16.49■□□□□ 0.23
SDF4-202ENST00000360001 NEGR1Q7Z3B1 354 aa16.48■□□□□ 0.23
SDF4-202ENST00000360001 K7EIL1 84 aa16.47■□□□□ 0.23
SDF4-202ENST00000360001 PYY3Q5JQD4 70 aa16.47■□□□□ 0.23
SDF4-202ENST00000360001 FAM222AQ5U5X8 452 aa16.47■□□□□ 0.23
SDF4-202ENST00000360001 LYRM9A8MSI8 78 aa16.47■□□□□ 0.23
SDF4-202ENST00000360001 DEFB130BP0DP73 79 aa16.47■□□□□ 0.23
SDF4-202ENST00000360001 DEFB130AP0DP74 79 aa16.47■□□□□ 0.23
SDF4-202ENST00000360001 RETNQ9HD89 108 aa16.47■□□□□ 0.23
SDF4-202ENST00000360001 TRBV27A0A0K0K1C4 114 aa16.46■□□□□ 0.23
SDF4-202ENST00000360001 LAGE3Q14657 143 aa16.46■□□□□ 0.23
SDF4-202ENST00000360001 C18orf15Q96N68 181 aa16.46■□□□□ 0.23
SDF4-202ENST00000360001 VCYO14598 125 aa16.46■□□□□ 0.22
SDF4-202ENST00000360001 CIDEAO60543 219 aa16.46■□□□□ 0.22
SDF4-202ENST00000360001 LEPROTL1O95214 131 aa16.46■□□□□ 0.22
SDF4-202ENST00000360001 HBDP02042 147 aa16.46■□□□□ 0.22
SDF4-202ENST00000360001 LINC00173Q6ZV60 143 aa16.46■□□□□ 0.22
SDF4-202ENST00000360001 DKK2Q9UBU2 259 aa16.46■□□□□ 0.22
SDF4-202ENST00000360001 NEXN-AS1Q8NBZ9 246 aa16.45■□□□□ 0.22
SDF4-202ENST00000360001 K7EMI3 77 aa16.44■□□□□ 0.22
SDF4-202ENST00000360001 FCER1GP30273 86 aa16.44■□□□□ 0.22
SDF4-202ENST00000360001 SMIM6P0DI80 62 aa16.44■□□□□ 0.22
SDF4-202ENST00000360001 JOSD1Q15040 202 aaPredicted RBP16.43■□□□□ 0.22
SDF4-202ENST00000360001 SLC25A29Q8N8R3 303 aa16.43■□□□□ 0.22
SDF4-202ENST00000360001 C3orf79P0CE67 100 aa16.42■□□□□ 0.22
SDF4-202ENST00000360001 KRTDAPP60985 99 aa16.42■□□□□ 0.22
SDF4-202ENST00000360001 LINC00518Q8N0U6 118 aa16.42■□□□□ 0.22
SDF4-202ENST00000360001 TNFRSF18Q9Y5U5 241 aa16.42■□□□□ 0.22
SDF4-202ENST00000360001 K7EQD1 137 aa16.42■□□□□ 0.22
SDF4-202ENST00000360001 FHL2Q14192 279 aa16.42■□□□□ 0.22
SDF4-202ENST00000360001 ORMDL2Q53FV1 153 aa16.42■□□□□ 0.22
SDF4-202ENST00000360001 DNAJC30Q96LL9 226 aa16.42■□□□□ 0.22
SDF4-202ENST00000360001 CELA1Q9UNI1 258 aa16.42■□□□□ 0.22
SDF4-202ENST00000360001 SBSPONQ8IVN8 264 aa16.41■□□□□ 0.22
SDF4-202ENST00000360001 DEFB104AQ8WTQ1 72 aa16.41■□□□□ 0.22
SDF4-202ENST00000360001 KIR2DL4Q99706 377 aa16.41■□□□□ 0.22
SDF4-202ENST00000360001 HSPB8Q9UJY1 196 aa16.41■□□□□ 0.22
SDF4-202ENST00000360001 TRGV4A0A0C4DH28 118 aa16.4■□□□□ 0.22
SDF4-202ENST00000360001 NUDT3O95989 172 aa16.4■□□□□ 0.22
SDF4-202ENST00000360001 DNHD1Q96M86 4753 aa16.39■□□□□ 0.21
SDF4-202ENST00000360001 TRBV10-1A0A0K0K1A3 114 aa16.39■□□□□ 0.21
SDF4-202ENST00000360001 I3L3M4 83 aa16.39■□□□□ 0.21
SDF4-202ENST00000360001 TRBV6-4A0A1B0GX49 114 aa16.38■□□□□ 0.21
SDF4-202ENST00000360001 BTF3P20290 206 aaKnown RBP16.38■□□□□ 0.21
SDF4-202ENST00000360001 C12orf57Q99622 126 aa16.38■□□□□ 0.21
SDF4-202ENST00000360001 TSHBP01222 138 aa16.38■□□□□ 0.21
SDF4-202ENST00000360001 SPART-AS1P0CW21 52 aa16.37■□□□□ 0.21
SDF4-202ENST00000360001 DEFB121Q5J5C9 76 aa16.37■□□□□ 0.21
SDF4-202ENST00000360001 CDPF1Q6NVV7 123 aa16.37■□□□□ 0.21
SDF4-202ENST00000360001 DAD1P61803 113 aa16.37■□□□□ 0.21
SDF4-202ENST00000360001 KRTAP21-3Q3LHN1 58 aa16.37■□□□□ 0.21
SDF4-202ENST00000360001 Q8N976 141 aa16.37■□□□□ 0.21
SDF4-202ENST00000360001 TENM3Q9P273 2699 aa16.36■□□□□ 0.21
SDF4-202ENST00000360001 TRBV7-3A0A075B6L6 115 aa16.36■□□□□ 0.21
SDF4-202ENST00000360001 ZNRF2Q8NHG8 242 aa16.36■□□□□ 0.21
SDF4-202ENST00000360001 SCGB1D1O95968 90 aa16.35■□□□□ 0.21
SDF4-202ENST00000360001 RPL36AP83881 106 aaKnown RBP16.35■□□□□ 0.21
SDF4-202ENST00000360001 RPL36ALQ969Q0 106 aaKnown RBP16.35■□□□□ 0.21
SDF4-202ENST00000360001 TOMM6Q96B49 74 aa16.35■□□□□ 0.21
SDF4-202ENST00000360001 MAP1LC3CQ9BXW4 147 aa16.35■□□□□ 0.21
SDF4-202ENST00000360001 SYS1-DBNDD2H3BUS1 97 aa16.34■□□□□ 0.21
SDF4-202ENST00000360001 RHOHQ15669 191 aa16.34■□□□□ 0.21
SDF4-202ENST00000360001 SPATA12Q7Z6I5 190 aa16.34■□□□□ 0.21
SDF4-202ENST00000360001 C2orf66Q6UXQ4 117 aa16.33■□□□□ 0.21
SDF4-202ENST00000360001 IFI27L1Q96BM0 104 aa16.33■□□□□ 0.21
SDF4-202ENST00000360001 C11orf68Q9H3H3 251 aaKnown RBP16.33■□□□□ 0.21
SDF4-202ENST00000360001 HHLA3Q9XRX5 114 aa16.33■□□□□ 0.21
SDF4-202ENST00000360001 LOC100131303A0A0U1RQF7 123 aa16.33■□□□□ 0.2
SDF4-202ENST00000360001 PHLDA1Q8WV24 401 aaPredicted RBP16.33■□□□□ 0.2
SDF4-202ENST00000360001 IGHV3-38A0A0C4DH36 116 aa16.32■□□□□ 0.2
SDF4-202ENST00000360001 GAGE12JA6NER3 117 aa16.32■□□□□ 0.2
SDF4-202ENST00000360001 UBE2D3P61077 147 aa16.32■□□□□ 0.2
SDF4-202ENST00000360001 UBE2D2P62837 147 aa16.32■□□□□ 0.2
SDF4-202ENST00000360001 GAGE1Q13065 139 aa16.32■□□□□ 0.2
SDF4-202ENST00000360001 GAGE4Q13068 117 aa16.32■□□□□ 0.2
SDF4-202ENST00000360001 GAGE5Q13069 117 aa16.32■□□□□ 0.2
SDF4-202ENST00000360001 GAGE13Q4V321 117 aa16.32■□□□□ 0.2
SDF4-202ENST00000360001 TM2D3Q9BRN9 247 aa16.32■□□□□ 0.2
SDF4-202ENST00000360001 TEX48A0A1B0GUV7 120 aa16.31■□□□□ 0.2
SDF4-202ENST00000360001 MRAPQ8TCY5 172 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 216.8 ms