RNA–Protein interactions for RNA: ENST00000355387.6

RNF220-202, Transcript of ring finger protein 220, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF220, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-202ENST00000355387 NBASA2RRP1 2371 aa9.55□□□□□ -0.88
RNF220-202ENST00000355387 A0A0B4J2C4 111 aa9.55□□□□□ -0.88
RNF220-202ENST00000355387 CFC1BP0CG36 223 aa9.55□□□□□ -0.88
RNF220-202ENST00000355387 CFC1P0CG37 223 aa9.55□□□□□ -0.88
RNF220-202ENST00000355387 TMEM95Q3KNT9 176 aa9.55□□□□□ -0.88
RNF220-202ENST00000355387 FAM74A4Q5TZK3 123 aa9.55□□□□□ -0.88
RNF220-202ENST00000355387 RELNP78509 3460 aa9.55□□□□□ -0.88
RNF220-202ENST00000355387 A0A096LNT2 108 aa9.54□□□□□ -0.88
RNF220-202ENST00000355387 RHODO00212 210 aa9.54□□□□□ -0.88
RNF220-202ENST00000355387 LINC00467Q9BRT7 94 aa9.54□□□□□ -0.88
RNF220-202ENST00000355387 PRO1854Q9UHT4 67 aa9.54□□□□□ -0.88
RNF220-202ENST00000355387 FSHBP01225 129 aa9.54□□□□□ -0.88
RNF220-202ENST00000355387 ZNF22P17026 224 aaPredicted RBP9.54□□□□□ -0.88
RNF220-202ENST00000355387 SMCPP49901 116 aaPredicted RBP9.54□□□□□ -0.88
RNF220-202ENST00000355387 Q6ZUT4 128 aa9.54□□□□□ -0.88
RNF220-202ENST00000355387 VPREB3Q9UKI3 123 aa9.54□□□□□ -0.88
RNF220-202ENST00000355387 IGLV4-3A0A075B6K6 122 aa9.54□□□□□ -0.88
RNF220-202ENST00000355387 TEN1Q86WV5 123 aa9.54□□□□□ -0.88
RNF220-202ENST00000355387 SPINK13Q1W4C9 94 aa9.53□□□□□ -0.88
RNF220-202ENST00000355387 ERG28Q9UKR5 140 aa9.53□□□□□ -0.88
RNF220-202ENST00000355387 TRAV12-2A0A075B6T6 113 aa9.53□□□□□ -0.88
RNF220-202ENST00000355387 LINC01600Q96MT4 127 aa9.53□□□□□ -0.88
RNF220-202ENST00000355387 TMEM262E9PQX1 116 aa9.52□□□□□ -0.88
RNF220-202ENST00000355387 EMP1P54849 157 aa9.52□□□□□ -0.88
RNF220-202ENST00000355387 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.52□□□□□ -0.89
RNF220-202ENST00000355387 A8MWV9 139 aa9.52□□□□□ -0.89
RNF220-202ENST00000355387 MRPS36P82909 103 aaKnown RBP9.52□□□□□ -0.89
RNF220-202ENST00000355387 WFDC12Q8WWY7 111 aa9.52□□□□□ -0.89
RNF220-202ENST00000355387 LOC107984156A0A0G2JMH3 177 aa9.52□□□□□ -0.89
RNF220-202ENST00000355387 PSMB2P49721 201 aa9.52□□□□□ -0.89
RNF220-202ENST00000355387 SYNJ2BPP57105 145 aa9.52□□□□□ -0.89
RNF220-202ENST00000355387 ARL17AQ8IVW1 177 aa9.52□□□□□ -0.89
RNF220-202ENST00000355387 M0R2P5 195 aa9.51□□□□□ -0.89
RNF220-202ENST00000355387 HOXD3P31249 432 aaPredicted RBP9.51□□□□□ -0.89
RNF220-202ENST00000355387 Q6YL49 198 aa9.51□□□□□ -0.89
RNF220-202ENST00000355387 ZNF702PQ9H963 129 aa9.51□□□□□ -0.89
RNF220-202ENST00000355387 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.51□□□□□ -0.892e-7■■■■□ 20.3
RNF220-202ENST00000355387 TMEM263Q8WUH6 116 aaKnown RBP9.5□□□□□ -0.89
RNF220-202ENST00000355387 TCL1BO95988 128 aa9.5□□□□□ -0.89
RNF220-202ENST00000355387 Q8N2B8 174 aa9.5□□□□□ -0.89
RNF220-202ENST00000355387 RNF183Q96D59 192 aa9.5□□□□□ -0.89
RNF220-202ENST00000355387 DNAJC30Q96LL9 226 aa9.5□□□□□ -0.89
RNF220-202ENST00000355387 SPANXA1Q9NS26 97 aa9.5□□□□□ -0.89
RNF220-202ENST00000355387 MT-ATP8P03928 68 aa9.5□□□□□ -0.89
RNF220-202ENST00000355387 XGP55808 180 aa9.5□□□□□ -0.89
RNF220-202ENST00000355387 C10orf99Q6UWK7 81 aa9.5□□□□□ -0.89
RNF220-202ENST00000355387 IGHV3-33P01772 117 aa9.49□□□□□ -0.89
RNF220-202ENST00000355387 IGKV3-20P01619 116 aa9.49□□□□□ -0.89
RNF220-202ENST00000355387 ZNF415Q09FC8 603 aa9.49□□□□□ -0.89
RNF220-202ENST00000355387 FAM104AQ969W3 186 aa9.48□□□□□ -0.89
RNF220-202ENST00000355387 A4D1N5 150 aa9.48□□□□□ -0.89
RNF220-202ENST00000355387 RBMY1A1P0DJD3 496 aaKnown RBP9.48□□□□□ -0.89
RNF220-202ENST00000355387 RBMY1CP0DJD4 496 aa9.48□□□□□ -0.89
RNF220-202ENST00000355387 RBMY1FQ15415 496 aaKnown RBP9.48□□□□□ -0.89
RNF220-202ENST00000355387 SPANXDQ9BXN6 97 aa9.48□□□□□ -0.89
RNF220-202ENST00000355387 SPANXCQ9NY87 97 aa9.48□□□□□ -0.89
RNF220-202ENST00000355387 A0A0J9YXV3 536 aa9.47□□□□□ -0.89
RNF220-202ENST00000355387 TINCRA0A1B0GVN0 87 aa9.47□□□□□ -0.89
RNF220-202ENST00000355387 H3BMM0 161 aa9.47□□□□□ -0.89
RNF220-202ENST00000355387 CARD19Q96LW7 228 aa9.47□□□□□ -0.89
RNF220-202ENST00000355387 OPRPNQ99935 248 aaPredicted RBP9.47□□□□□ -0.89
RNF220-202ENST00000355387 A0A0J9YXY3 114 aa9.47□□□□□ -0.89
RNF220-202ENST00000355387 FHL3Q13643 280 aa9.47□□□□□ -0.89
RNF220-202ENST00000355387 SPXQ9BT56 116 aa9.47□□□□□ -0.89
RNF220-202ENST00000355387 PEMTQ9UBM1 199 aa9.47□□□□□ -0.89
RNF220-202ENST00000355387 CD28P10747 220 aa9.47□□□□□ -0.89
RNF220-202ENST00000355387 ZFAND6Q6FIF0 208 aa9.47□□□□□ -0.89
RNF220-202ENST00000355387 TIMM21Q9BVV7 248 aa9.47□□□□□ -0.89
RNF220-202ENST00000355387 TNFRSF18Q9Y5U5 241 aa9.47□□□□□ -0.89
RNF220-202ENST00000355387 IGHV1-58A0A0C4DH39 117 aa9.46□□□□□ -0.89
RNF220-202ENST00000355387 BEAN1Q3B7T3 259 aa9.46□□□□□ -0.89
RNF220-202ENST00000355387 TIMM17BO60830 172 aa9.46□□□□□ -0.9
RNF220-202ENST00000355387 IGHV3-30-3P0DP02 117 aa9.46□□□□□ -0.9
RNF220-202ENST00000355387 MUSTN1Q8IVN3 82 aa9.45□□□□□ -0.9
RNF220-202ENST00000355387 DUX5Q96PT3 197 aa9.45□□□□□ -0.9
RNF220-202ENST00000355387 LITAFQ99732 161 aa9.45□□□□□ -0.9
RNF220-202ENST00000355387 ANAPC13Q9BS18 74 aa9.45□□□□□ -0.9
RNF220-202ENST00000355387 SPTAN1Q13813 2472 aaKnown RBP9.45□□□□□ -0.9
RNF220-202ENST00000355387 TRBV30A0A0K0K1B3 111 aa9.45□□□□□ -0.9
RNF220-202ENST00000355387 EIF4EBP3O60516 100 aaPredicted RBP9.45□□□□□ -0.9
RNF220-202ENST00000355387 GAGE5Q13069 117 aa9.45□□□□□ -0.9
RNF220-202ENST00000355387 GAGE6Q13070 117 aa9.45□□□□□ -0.9
RNF220-202ENST00000355387 TEX29Q8N6K0 151 aa9.45□□□□□ -0.9
RNF220-202ENST00000355387 CHCHD7Q9BUK0 85 aa9.45□□□□□ -0.9
RNF220-202ENST00000355387 ASH1LQ9NR48 2969 aaKnown RBP9.44□□□□□ -0.9
RNF220-202ENST00000355387 NACAE9PAV3 2078 aa9.44□□□□□ -0.9
RNF220-202ENST00000355387 IGHV3-53P01767 116 aa9.44□□□□□ -0.9
RNF220-202ENST00000355387 CITED1Q99966 193 aa9.44□□□□□ -0.9
RNF220-202ENST00000355387 UBE2D4Q9Y2X8 147 aa9.44□□□□□ -0.9
RNF220-202ENST00000355387 TGFAP01135 160 aa9.44□□□□□ -0.9
RNF220-202ENST00000355387 SCGB1C2P0DMR2 95 aa9.44□□□□□ -0.9
RNF220-202ENST00000355387 DEFB131AP59861 70 aa9.44□□□□□ -0.9
RNF220-202ENST00000355387 C4orf3Q8WVX3 66 aa9.44□□□□□ -0.9
RNF220-202ENST00000355387 AKAP6Q13023 2319 aa9.43□□□□□ -0.9
RNF220-202ENST00000355387 RBMY1BA6NDE4 496 aaKnown RBP9.43□□□□□ -0.9
RNF220-202ENST00000355387 RBMY1EA6NEQ0 496 aaKnown RBP9.43□□□□□ -0.9
RNF220-202ENST00000355387 RBMY1DP0C7P1 496 aaKnown RBP9.43□□□□□ -0.9
RNF220-202ENST00000355387 DEFB104AQ8WTQ1 72 aa9.43□□□□□ -0.9
RNF220-202ENST00000355387 DUX3Q96PT4 197 aa9.43□□□□□ -0.9
RNF220-202ENST00000355387 ITPR1Q14643 2758 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms