RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 TNXBP22105 4242 aa3.97□□□□□ -1.77
CD47-201ENST00000355354 ANAPC16Q96DE5 110 aa3.97□□□□□ -1.77
CD47-201ENST00000355354 CNIH1O95406 144 aa3.97□□□□□ -1.77
CD47-201ENST00000355354 P01737 135 aa3.97□□□□□ -1.77
CD47-201ENST00000355354 CFC1BP0CG36 223 aa3.97□□□□□ -1.77
CD47-201ENST00000355354 CFC1P0CG37 223 aa3.97□□□□□ -1.77
CD47-201ENST00000355354 SMIM17P0DL12 118 aa3.97□□□□□ -1.77
CD47-201ENST00000355354 PIK3CD-AS1Q5SR53 167 aa3.97□□□□□ -1.77
CD47-201ENST00000355354 UQCR10Q9UDW1 63 aa3.97□□□□□ -1.77
CD47-201ENST00000355354 CHTOPQ9Y3Y2 248 aaKnown RBP3.97□□□□□ -1.77
CD47-201ENST00000355354 HOXD3P31249 432 aaPredicted RBP3.97□□□□□ -1.77
CD47-201ENST00000355354 PLP1P60201 277 aa3.97□□□□□ -1.77
CD47-201ENST00000355354 C5orf56Q8N8D9 126 aa3.97□□□□□ -1.77
CD47-201ENST00000355354 SPANXB1Q9NS25 103 aaPredicted RBP3.97□□□□□ -1.77
CD47-201ENST00000355354 LGALS1P09382 135 aaKnown RBP3.96□□□□□ -1.77
CD47-201ENST00000355354 COL5A1-AS1Q5SY13 56 aa3.96□□□□□ -1.77
CD47-201ENST00000355354 EEF1AKMT3Q96AZ1 226 aa3.96□□□□□ -1.77
CD47-201ENST00000355354 ADTRPQ96IZ2 230 aa3.96□□□□□ -1.77
CD47-201ENST00000355354 HIF1ANQ9NWT6 349 aa3.96□□□□□ -1.77
CD47-201ENST00000355354 TRAV2A0A0B4J234 112 aa3.96□□□□□ -1.78
CD47-201ENST00000355354 A0A0G2JLM5 398 aa3.96□□□□□ -1.78
CD47-201ENST00000355354 APOMO95445 188 aa3.96□□□□□ -1.78
CD47-201ENST00000355354 LEPP41159 167 aa3.96□□□□□ -1.78
CD47-201ENST00000355354 C9orf116Q5BN46 136 aaPredicted RBP3.96□□□□□ -1.78
CD47-201ENST00000355354 STXBP6Q8NFX7 210 aa3.96□□□□□ -1.78
CD47-201ENST00000355354 ZNF256Q9Y2P7 627 aaPredicted RBP3.96□□□□□ -1.78
CD47-201ENST00000355354 H7C2G1 150 aa3.96□□□□□ -1.78
CD47-201ENST00000355354 PRB2P02812 416 aaPredicted RBP3.96□□□□□ -1.78
CD47-201ENST00000355354 HTR1DP28221 377 aa3.96□□□□□ -1.78
CD47-201ENST00000355354 TMEM97Q5BJF2 176 aa3.96□□□□□ -1.78
CD47-201ENST00000355354 TMEM61Q8N0U2 210 aa3.96□□□□□ -1.78
CD47-201ENST00000355354 MYOZ3Q8TDC0 251 aa3.96□□□□□ -1.78
CD47-201ENST00000355354 YAE1D1Q9NRH1 226 aa3.96□□□□□ -1.78
CD47-201ENST00000355354 K7EQM0 130 aa3.96□□□□□ -1.78
CD47-201ENST00000355354 CDKN1BP46527 198 aa3.96□□□□□ -1.78
CD47-201ENST00000355354 NSUN5P1Q3KNT7 163 aa3.96□□□□□ -1.78
CD47-201ENST00000355354 ZFAND6Q6FIF0 208 aa3.96□□□□□ -1.78
CD47-201ENST00000355354 SHISA2Q6UWI4 295 aa3.96□□□□□ -1.78
CD47-201ENST00000355354 KLHDC1Q8N7A1 406 aa3.96□□□□□ -1.78
CD47-201ENST00000355354 GAGE1Q13065 139 aa3.95□□□□□ -1.78
CD47-201ENST00000355354 ATP6V1FQ16864 119 aa3.95□□□□□ -1.78
CD47-201ENST00000355354 PRELID3AQ96N28 172 aa3.95□□□□□ -1.78
CD47-201ENST00000355354 NDFIP1Q9BT67 221 aa3.95□□□□□ -1.78
CD47-201ENST00000355354 TCL1BO95988 128 aa3.95□□□□□ -1.78
CD47-201ENST00000355354 RAB1BQ9H0U4 201 aa3.95□□□□□ -1.78
CD47-201ENST00000355354 UFC1Q9Y3C8 167 aa3.95□□□□□ -1.78
CD47-201ENST00000355354 A0A096LPF7 62 aa3.95□□□□□ -1.78
CD47-201ENST00000355354 RNF152Q8N8N0 203 aa3.95□□□□□ -1.78
CD47-201ENST00000355354 BORCS7Q96B45 105 aa3.95□□□□□ -1.78
CD47-201ENST00000355354 GAL3ST2Q9H3Q3 398 aa3.95□□□□□ -1.78
CD47-201ENST00000355354 C21orf62Q9NYP8 219 aa3.95□□□□□ -1.78
CD47-201ENST00000355354 U3KQE9 123 aa3.95□□□□□ -1.78
CD47-201ENST00000355354 U3KQK5 164 aa3.95□□□□□ -1.78
CD47-201ENST00000355354 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.95□□□□□ -1.78
CD47-201ENST00000355354 IGKV2-29A2NJV5 120 aaPredicted RBP3.95□□□□□ -1.78
CD47-201ENST00000355354 HAX1O00165 279 aa3.95□□□□□ -1.78
CD47-201ENST00000355354 NBR2O15453 112 aa3.95□□□□□ -1.78
CD47-201ENST00000355354 BAALCQ8WXS3 180 aa3.95□□□□□ -1.78
CD47-201ENST00000355354 CLEC2BQ92478 149 aa3.95□□□□□ -1.78
CD47-201ENST00000355354 DAZAP1Q96EP5 407 aaKnown RBP3.95□□□□□ -1.78
CD47-201ENST00000355354 TRGV9Q99603 122 aa3.95□□□□□ -1.78
CD47-201ENST00000355354 CNFNQ9BYD5 112 aa3.95□□□□□ -1.78
CD47-201ENST00000355354 A0A0J9YY99 117 aa3.94□□□□□ -1.78
CD47-201ENST00000355354 IGHV3-53P01767 116 aa3.94□□□□□ -1.78
CD47-201ENST00000355354 PRADC1Q9BSG0 188 aa3.94□□□□□ -1.78
CD47-201ENST00000355354 G3V4G9 280 aa3.94□□□□□ -1.78
CD47-201ENST00000355354 PLGLAQ15195 96 aa3.94□□□□□ -1.78
CD47-201ENST00000355354 CITED2Q99967 270 aaPredicted RBP3.94□□□□□ -1.78
CD47-201ENST00000355354 CDKN2A-AS1Q9UH64 79 aa3.94□□□□□ -1.78
CD47-201ENST00000355354 PLAC8L1A1L4L8 177 aa3.94□□□□□ -1.78
CD47-201ENST00000355354 HLA-DQA1P01909 254 aa3.94□□□□□ -1.78
CD47-201ENST00000355354 DEFB112Q30KQ8 113 aa3.94□□□□□ -1.78
CD47-201ENST00000355354 OR10J3Q5JRS4 329 aa3.94□□□□□ -1.78
CD47-201ENST00000355354 LINC01006Q8NI28 216 aa3.94□□□□□ -1.78
CD47-201ENST00000355354 KRTAP10-11P60412 298 aa3.94□□□□□ -1.78
CD47-201ENST00000355354 RASL11BQ9BPW5 248 aa3.94□□□□□ -1.78
CD47-201ENST00000355354 MRPS16Q9Y3D3 137 aaKnown RBP3.94□□□□□ -1.78
CD47-201ENST00000355354 IGLL5B9A064 214 aa3.93□□□□□ -1.78
CD47-201ENST00000355354 CKS2P33552 79 aa3.93□□□□□ -1.78
CD47-201ENST00000355354 POLR2KP53803 58 aaKnown RBP3.93□□□□□ -1.78
CD47-201ENST00000355354 ZNF493Q6ZR52 646 aa3.93□□□□□ -1.78
CD47-201ENST00000355354 NPBQ8NG41 125 aa3.93□□□□□ -1.78
CD47-201ENST00000355354 OR11H6Q8NGC7 330 aa3.93□□□□□ -1.78
CD47-201ENST00000355354 RPEQ96AT9 228 aa3.93□□□□□ -1.78
CD47-201ENST00000355354 OR5AL1P0C617 328 aa3.93□□□□□ -1.78
CD47-201ENST00000355354 MED14OSP0DP75 135 aa3.93□□□□□ -1.78
CD47-201ENST00000355354 UBE2D1P51668 147 aa3.93□□□□□ -1.78
CD47-201ENST00000355354 DPM3Q9P2X0 92 aa3.93□□□□□ -1.78
CD47-201ENST00000355354 IGLV4-60A0A075B6I1 120 aa3.93□□□□□ -1.78
CD47-201ENST00000355354 A0A1W2PPM0 123 aa3.93□□□□□ -1.78
CD47-201ENST00000355354 NDUFB3O43676 98 aa3.93□□□□□ -1.78
CD47-201ENST00000355354 LIPFP07098 398 aa3.93□□□□□ -1.78
CD47-201ENST00000355354 IGHV4OR15-8A0A075B7B6 117 aa3.93□□□□□ -1.78
CD47-201ENST00000355354 IGHV3OR16-12A0A075B7B8 117 aa3.93□□□□□ -1.78
CD47-201ENST00000355354 A0A087WW49 117 aa3.93□□□□□ -1.78
CD47-201ENST00000355354 E9PLD3 99 aa3.93□□□□□ -1.78
CD47-201ENST00000355354 FAM19A4Q96LR4 140 aa3.93□□□□□ -1.78
CD47-201ENST00000355354 SIGMAR1Q99720 223 aa3.93□□□□□ -1.78
CD47-201ENST00000355354 MS4A6AQ9H2W1 248 aa3.93□□□□□ -1.78
CD47-201ENST00000355354 TSPAN13O95857 204 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 966.2 ms