RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 CCDC179H3BU77 68 aa9.7□□□□□ -0.86
SYNCRIP-201ENST00000355238 BPY2O14599 106 aa9.7□□□□□ -0.86
SYNCRIP-201ENST00000355238 FAM110AQ9BQ89 295 aa9.7□□□□□ -0.86
SYNCRIP-201ENST00000355238 Q6Q795 121 aa9.69□□□□□ -0.86
SYNCRIP-201ENST00000355238 C5orf56Q8N8D9 126 aa9.69□□□□□ -0.86
SYNCRIP-201ENST00000355238 TRBV10-1A0A0K0K1A3 114 aa9.69□□□□□ -0.86
SYNCRIP-201ENST00000355238 K7ENP7 123 aa9.69□□□□□ -0.86
SYNCRIP-201ENST00000355238 COX7CP15954 63 aa9.69□□□□□ -0.86
SYNCRIP-201ENST00000355238 SPTSSBQ8NFR3 76 aa9.69□□□□□ -0.86
SYNCRIP-201ENST00000355238 NCOR1O75376 2440 aa9.69□□□□□ -0.86
SYNCRIP-201ENST00000355238 XGP55808 180 aa9.69□□□□□ -0.86
SYNCRIP-201ENST00000355238 TNRC6BQ9UPQ9 1833 aaKnown RBP9.69□□□□□ -0.86
SYNCRIP-201ENST00000355238 CREBBPQ92793 2442 aa9.69□□□□□ -0.86
SYNCRIP-201ENST00000355238 USF3Q68DE3 2245 aa9.69□□□□□ -0.86
SYNCRIP-201ENST00000355238 CLUHP3Q96NS8 147 aa9.69□□□□□ -0.86
SYNCRIP-201ENST00000355238 ANAPC1Q9H1A4 1944 aa9.69□□□□□ -0.86
SYNCRIP-201ENST00000355238 A0A0U1RQV1 116 aa9.68□□□□□ -0.86
SYNCRIP-201ENST00000355238 NCKAP5O14513 1909 aa9.68□□□□□ -0.86
SYNCRIP-201ENST00000355238 ZNF22P17026 224 aaPredicted RBP9.68□□□□□ -0.86
SYNCRIP-201ENST00000355238 COX7BP24311 80 aa9.68□□□□□ -0.86
SYNCRIP-201ENST00000355238 BRWD1-AS2P59051 145 aa9.68□□□□□ -0.86
SYNCRIP-201ENST00000355238 GPHB5Q86YW7 130 aa9.68□□□□□ -0.86
SYNCRIP-201ENST00000355238 TANC1Q9C0D5 1861 aa9.68□□□□□ -0.86
SYNCRIP-201ENST00000355238 CNOT1A5YKK6 2376 aaKnown RBP9.68□□□□□ -0.86
SYNCRIP-201ENST00000355238 FANCD2OSQ96PS1 177 aa9.68□□□□□ -0.86
SYNCRIP-201ENST00000355238 ENHOQ6UWT2 76 aa9.67□□□□□ -0.86
SYNCRIP-201ENST00000355238 NOTCH3Q9UM47 2321 aa9.67□□□□□ -0.86
SYNCRIP-201ENST00000355238 SPAG11BQ08648 103 aa9.67□□□□□ -0.86
SYNCRIP-201ENST00000355238 DEFB112Q30KQ8 113 aa9.67□□□□□ -0.86
SYNCRIP-201ENST00000355238 Q6ZPA2 131 aa9.67□□□□□ -0.86
SYNCRIP-201ENST00000355238 ARHGAP21Q5T5U3 1957 aa9.67□□□□□ -0.86
SYNCRIP-201ENST00000355238 CCL24O00175 119 aa9.67□□□□□ -0.86
SYNCRIP-201ENST00000355238 IGHV4-59P01825 116 aa9.67□□□□□ -0.86
SYNCRIP-201ENST00000355238 CACNA1GO43497 2377 aa9.67□□□□□ -0.86
SYNCRIP-201ENST00000355238 PLA2G5P39877 138 aa9.66□□□□□ -0.86
SYNCRIP-201ENST00000355238 IGHV3-30P01768 117 aa9.66□□□□□ -0.86
SYNCRIP-201ENST00000355238 IGHV3-30-5P0DP03 117 aa9.66□□□□□ -0.86
SYNCRIP-201ENST00000355238 TICRRQ7Z2Z1 1910 aa9.66□□□□□ -0.86
SYNCRIP-201ENST00000355238 SLURP1P55000 103 aa9.66□□□□□ -0.86
SYNCRIP-201ENST00000355238 LINC00308Q8TCZ7 52 aa9.66□□□□□ -0.86
SYNCRIP-201ENST00000355238 PLXNB3Q9ULL4 1909 aa9.66□□□□□ -0.86
SYNCRIP-201ENST00000355238 A0A0J9YX75 114 aa9.66□□□□□ -0.86
SYNCRIP-201ENST00000355238 EIF4EBP1Q13541 118 aaPredicted RBP9.66□□□□□ -0.86
SYNCRIP-201ENST00000355238 SPTBN2O15020 2390 aa9.66□□□□□ -0.86
SYNCRIP-201ENST00000355238 TIRAPP58753 221 aa9.65□□□□□ -0.86
SYNCRIP-201ENST00000355238 SPRY4Q9C004 299 aa9.65□□□□□ -0.86
SYNCRIP-201ENST00000355238 LINC00574Q9H8X3 128 aa9.65□□□□□ -0.86
SYNCRIP-201ENST00000355238 CEMP1Q6PRD7 247 aaPredicted RBP9.65□□□□□ -0.86
SYNCRIP-201ENST00000355238 C10orf105Q8TEF2 133 aa9.65□□□□□ -0.86
SYNCRIP-201ENST00000355238 ODF3Q96PU9 254 aa9.65□□□□□ -0.86
SYNCRIP-201ENST00000355238 USP17L23D6RBM5 183 aa9.65□□□□□ -0.86
SYNCRIP-201ENST00000355238 HHLA3Q9XRX5 114 aa9.65□□□□□ -0.86
SYNCRIP-201ENST00000355238 TMEM89A2RUT3 159 aa9.65□□□□□ -0.87
SYNCRIP-201ENST00000355238 MAPK1IP1LQ8NDC0 245 aa9.65□□□□□ -0.87
SYNCRIP-201ENST00000355238 RNF185Q96GF1 192 aa9.65□□□□□ -0.87
SYNCRIP-201ENST00000355238 DEFB136Q30KP8 78 aa9.64□□□□□ -0.87
SYNCRIP-201ENST00000355238 CGB3P0DN86 165 aa9.64□□□□□ -0.87
SYNCRIP-201ENST00000355238 IGLV4-3A0A075B6K6 122 aa9.64□□□□□ -0.87
SYNCRIP-201ENST00000355238 TIMM17BO60830 172 aa9.64□□□□□ -0.87
SYNCRIP-201ENST00000355238 MYCNOSP40205 109 aa9.64□□□□□ -0.87
SYNCRIP-201ENST00000355238 UFSP1Q6NVU6 142 aa9.64□□□□□ -0.87
SYNCRIP-201ENST00000355238 CRIP3Q6Q6R5 217 aa9.64□□□□□ -0.87
SYNCRIP-201ENST00000355238 CACNA1HO95180 2353 aa9.63□□□□□ -0.87
SYNCRIP-201ENST00000355238 IGFL2Q6UWQ7 119 aa9.63□□□□□ -0.87
SYNCRIP-201ENST00000355238 LST1O00453 97 aa9.63□□□□□ -0.87
SYNCRIP-201ENST00000355238 MED13Q9UHV7 2174 aa9.63□□□□□ -0.87
SYNCRIP-201ENST00000355238 BLCAPP62952 87 aa9.63□□□□□ -0.87
SYNCRIP-201ENST00000355238 COL4A3Q01955 1670 aa9.63□□□□□ -0.87
SYNCRIP-201ENST00000355238 CGB7P0DN87 165 aa9.63□□□□□ -0.87
SYNCRIP-201ENST00000355238 Q96MF0 132 aa9.63□□□□□ -0.87
SYNCRIP-201ENST00000355238 DENND4CQ5VZ89 1909 aa9.63□□□□□ -0.87
SYNCRIP-201ENST00000355238 FRMPD3Q5JV73 1810 aa9.63□□□□□ -0.87
SYNCRIP-201ENST00000355238 SPART-AS1P0CW21 52 aa9.62□□□□□ -0.87
SYNCRIP-201ENST00000355238 PIK3CD-AS1Q5SR53 167 aa9.62□□□□□ -0.87
SYNCRIP-201ENST00000355238 CDKN2A-AS1Q9UH64 79 aa9.62□□□□□ -0.87
SYNCRIP-201ENST00000355238 CRIP1P50238 77 aa9.62□□□□□ -0.87
SYNCRIP-201ENST00000355238 DEFB1P60022 68 aa9.62□□□□□ -0.87
SYNCRIP-201ENST00000355238 DKK4Q9UBT3 224 aa9.62□□□□□ -0.87
SYNCRIP-201ENST00000355238 IGHV4OR15-8A0A075B7B6 117 aa9.61□□□□□ -0.87
SYNCRIP-201ENST00000355238 A0A087WW49 117 aa9.61□□□□□ -0.87
SYNCRIP-201ENST00000355238 FAM222AQ5U5X8 452 aa9.61□□□□□ -0.87
SYNCRIP-201ENST00000355238 Q8N7P7 452 aa9.61□□□□□ -0.87
SYNCRIP-201ENST00000355238 IBA57-AS1B1ANH7 110 aa9.61□□□□□ -0.87
SYNCRIP-201ENST00000355238 INSL3P51460 131 aa9.61□□□□□ -0.87
SYNCRIP-201ENST00000355238 SEM1Q6ZVN7 128 aa9.61□□□□□ -0.87
SYNCRIP-201ENST00000355238 DYSFO75923 2080 aa9.61□□□□□ -0.87
SYNCRIP-201ENST00000355238 SP5Q6BEB4 398 aaPredicted RBP9.61□□□□□ -0.87
SYNCRIP-201ENST00000355238 TMEM263Q8WUH6 116 aaKnown RBP9.61□□□□□ -0.87
SYNCRIP-201ENST00000355238 ZFAND2AQ8N6M9 145 aa9.61□□□□□ -0.87
SYNCRIP-201ENST00000355238 C1orf195Q5TG92 126 aa9.61□□□□□ -0.87
SYNCRIP-201ENST00000355238 ACACAQ13085 2346 aa9.6□□□□□ -0.87
SYNCRIP-201ENST00000355238 Q8N976 141 aa9.6□□□□□ -0.87
SYNCRIP-201ENST00000355238 H7C423 109 aa9.6□□□□□ -0.87
SYNCRIP-201ENST00000355238 M0QXV9 152 aa9.6□□□□□ -0.87
SYNCRIP-201ENST00000355238 LINC00694P0DN24 101 aa9.6□□□□□ -0.87
SYNCRIP-201ENST00000355238 UNQ9165/PRO28630Q6UXU0 137 aa9.6□□□□□ -0.87
SYNCRIP-201ENST00000355238 KIAA1671Q9BY89 1806 aa9.6□□□□□ -0.87
SYNCRIP-201ENST00000355238 IGHV4-38-2P0DP08 117 aa9.6□□□□□ -0.87
SYNCRIP-201ENST00000355238 SEC61GP60059 68 aa9.6□□□□□ -0.87
SYNCRIP-201ENST00000355238 MRPS36P82909 103 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms