RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 OPRPNQ99935 248 aaPredicted RBP8.14□□□□□ -1.11
SVIP-201ENST00000354193 PPP1R17O96001 155 aa8.13□□□□□ -1.11
SVIP-201ENST00000354193 UQCR10Q9UDW1 63 aa8.13□□□□□ -1.11
SVIP-201ENST00000354193 FBN1P35555 2871 aaKnown RBP8.13□□□□□ -1.11
SVIP-201ENST00000354193 NDUFA7O95182 113 aa8.13□□□□□ -1.11
SVIP-201ENST00000354193 IGLV1-51P01701 117 aa8.13□□□□□ -1.11
SVIP-201ENST00000354193 ZNF25P17030 456 aaPredicted RBP8.13□□□□□ -1.11
SVIP-201ENST00000354193 G0S2P27469 103 aa8.13□□□□□ -1.11
SVIP-201ENST00000354193 SLC25A34Q6PIV7 304 aa8.13□□□□□ -1.11
SVIP-201ENST00000354193 SCGB1D4Q6XE38 83 aa8.13□□□□□ -1.11
SVIP-201ENST00000354193 A0A0J9YY99 117 aa8.13□□□□□ -1.11
SVIP-201ENST00000354193 CRXO43186 299 aaPredicted RBP8.13□□□□□ -1.11
SVIP-201ENST00000354193 PET117Q6UWS5 81 aa8.13□□□□□ -1.11
SVIP-201ENST00000354193 MRPL35Q9NZE8 188 aaKnown RBP8.13□□□□□ -1.11
SVIP-201ENST00000354193 CEMP1Q6PRD7 247 aaPredicted RBP8.13□□□□□ -1.11
SVIP-201ENST00000354193 COTL1Q14019 142 aa8.12□□□□□ -1.11
SVIP-201ENST00000354193 ZNF479Q96JC4 524 aa8.12□□□□□ -1.11
SVIP-201ENST00000354193 CMC4P56277 68 aaPredicted RBP8.12□□□□□ -1.11
SVIP-201ENST00000354193 SPATA12Q7Z6I5 190 aa8.12□□□□□ -1.11
SVIP-201ENST00000354193 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.12□□□□□ -1.11
SVIP-201ENST00000354193 IGKV2-29A2NJV5 120 aaPredicted RBP8.12□□□□□ -1.11
SVIP-201ENST00000354193 A8MWV9 139 aa8.12□□□□□ -1.11
SVIP-201ENST00000354193 M0R143 59 aa8.12□□□□□ -1.11
SVIP-201ENST00000354193 PTTG1IPP53801 180 aa8.12□□□□□ -1.11
SVIP-201ENST00000354193 FOSL1P15407 271 aa8.11□□□□□ -1.11
SVIP-201ENST00000354193 Q9UF83 564 aa8.11□□□□□ -1.11
SVIP-201ENST00000354193 FHL3Q13643 280 aa8.11□□□□□ -1.11
SVIP-201ENST00000354193 TRPT1Q86TN4 253 aaKnown RBP8.11□□□□□ -1.11
SVIP-201ENST00000354193 UBE2L6O14933 153 aa8.11□□□□□ -1.11
SVIP-201ENST00000354193 COX8CQ7Z4L0 72 aa8.11□□□□□ -1.11
SVIP-201ENST00000354193 FAM110AQ9BQ89 295 aa8.11□□□□□ -1.11
SVIP-201ENST00000354193 TRBV7-9A0A0J9YWB2 115 aa8.11□□□□□ -1.11
SVIP-201ENST00000354193 CYSRT1A8MQ03 144 aa8.11□□□□□ -1.11
SVIP-201ENST00000354193 VCX2Q9H322 139 aa8.11□□□□□ -1.11
SVIP-201ENST00000354193 LAMTOR2Q9Y2Q5 125 aa8.11□□□□□ -1.11
SVIP-201ENST00000354193 RPL36AP83881 106 aaKnown RBP8.1□□□□□ -1.11
SVIP-201ENST00000354193 RPL36ALQ969Q0 106 aaKnown RBP8.1□□□□□ -1.11
SVIP-201ENST00000354193 CHCHD5Q9BSY4 110 aa8.1□□□□□ -1.11
SVIP-201ENST00000354193 CHTOPQ9Y3Y2 248 aaKnown RBP8.1□□□□□ -1.11
SVIP-201ENST00000354193 ESDP10768 282 aa8.1□□□□□ -1.11
SVIP-201ENST00000354193 C1orf158Q8N1D5 194 aa8.1□□□□□ -1.11
SVIP-201ENST00000354193 OR11H2Q8NH07 326 aa8.1□□□□□ -1.11
SVIP-201ENST00000354193 NRACQ8N912 160 aa8.1□□□□□ -1.11
SVIP-201ENST00000354193 MIEN1Q9BRT3 115 aa8.1□□□□□ -1.11
SVIP-201ENST00000354193 DPM2O94777 84 aa8.1□□□□□ -1.11
SVIP-201ENST00000354193 IGKCP01834 107 aa8.1□□□□□ -1.11
SVIP-201ENST00000354193 KRTAP24-1Q3LI83 254 aa8.1□□□□□ -1.11
SVIP-201ENST00000354193 NDUFAF3Q9BU61 184 aa8.1□□□□□ -1.11
SVIP-201ENST00000354193 CRYGDP07320 174 aa8.09□□□□□ -1.11
SVIP-201ENST00000354193 CNFNQ9BYD5 112 aa8.09□□□□□ -1.11
SVIP-201ENST00000354193 TRAV13-1A0A0B4J241 112 aa8.09□□□□□ -1.11
SVIP-201ENST00000354193 A0A0U1RRA0 63 aa8.09□□□□□ -1.11
SVIP-201ENST00000354193 F5H768 121 aa8.09□□□□□ -1.11
SVIP-201ENST00000354193 GCSHP23434 173 aa8.09□□□□□ -1.11
SVIP-201ENST00000354193 RAB37Q96AX2 223 aa8.09□□□□□ -1.11
SVIP-201ENST00000354193 A0A1B0GV90 55 aa8.08□□□□□ -1.12
SVIP-201ENST00000354193 ANKRD39Q53RE8 183 aa8.08□□□□□ -1.12
SVIP-201ENST00000354193 TEX43Q6ZNM6 134 aa8.08□□□□□ -1.12
SVIP-201ENST00000354193 ODF3Q96PU9 254 aa8.08□□□□□ -1.12
SVIP-201ENST00000354193 ADARB2-AS1A8MUL3 147 aa8.08□□□□□ -1.12
SVIP-201ENST00000354193 EREGO14944 169 aa8.08□□□□□ -1.12
SVIP-201ENST00000354193 ZFP2Q6ZN57 461 aa8.08□□□□□ -1.12
SVIP-201ENST00000354193 PRSS29PA6NIE9 313 aa8.08□□□□□ -1.12
SVIP-201ENST00000354193 I3L3M4 83 aa8.08□□□□□ -1.12
SVIP-201ENST00000354193 SPXQ9BT56 116 aa8.08□□□□□ -1.12
SVIP-201ENST00000354193 GEMIN7Q9H840 131 aaKnown RBP8.08□□□□□ -1.12
SVIP-201ENST00000354193 TMEM97Q5BJF2 176 aa8.07□□□□□ -1.12
SVIP-201ENST00000354193 C20orf78Q9BR46 151 aa8.07□□□□□ -1.12
SVIP-201ENST00000354193 IGLC3P0DOY3 106 aa8.07□□□□□ -1.12
SVIP-201ENST00000354193 SRSF9Q13242 221 aaKnown RBP eCLIP8.07□□□□□ -1.12
SVIP-201ENST00000354193 PCP2Q8IVA1 136 aa8.07□□□□□ -1.12
SVIP-201ENST00000354193 LOC100131303A0A0U1RQF7 123 aa8.07□□□□□ -1.12
SVIP-201ENST00000354193 ZNF575Q86XF7 245 aa8.07□□□□□ -1.12
SVIP-201ENST00000354193 C9orf85Q96MD7 179 aa8.07□□□□□ -1.12
SVIP-201ENST00000354193 NAA38Q9BRA0 125 aaKnown RBP8.07□□□□□ -1.12
SVIP-201ENST00000354193 RHODO00212 210 aa8.06□□□□□ -1.12
SVIP-201ENST00000354193 DAD1P61803 113 aa8.06□□□□□ -1.12
SVIP-201ENST00000354193 CLPSL2Q6UWE3 100 aa8.06□□□□□ -1.12
SVIP-201ENST00000354193 TMEM263Q8WUH6 116 aaKnown RBP8.06□□□□□ -1.12
SVIP-201ENST00000354193 FAM19A4Q96LR4 140 aa8.06□□□□□ -1.12
SVIP-201ENST00000354193 M0QY20 66 aa8.06□□□□□ -1.12
SVIP-201ENST00000354193 MPV17L2Q567V2 206 aa8.06□□□□□ -1.12
SVIP-201ENST00000354193 A0A096LNJ9 63 aa8.06□□□□□ -1.12
SVIP-201ENST00000354193 CFAP126Q5VTH2 177 aa8.06□□□□□ -1.12
SVIP-201ENST00000354193 Q6ZSN1 163 aa8.06□□□□□ -1.12
SVIP-201ENST00000354193 GAGE6Q13070 117 aa8.06□□□□□ -1.12
SVIP-201ENST00000354193 TOMM7Q9P0U1 55 aa8.06□□□□□ -1.12
SVIP-201ENST00000354193 PRSS2P07478 247 aa8.05□□□□□ -1.12
SVIP-201ENST00000354193 MED14OSP0DP75 135 aa8.05□□□□□ -1.12
SVIP-201ENST00000354193 U3KQK5 164 aa8.05□□□□□ -1.12
SVIP-201ENST00000354193 K7EMI3 77 aa8.05□□□□□ -1.12
SVIP-201ENST00000354193 FAM222AQ5U5X8 452 aa8.05□□□□□ -1.12
SVIP-201ENST00000354193 Q6ZVH6 145 aa8.05□□□□□ -1.12
SVIP-201ENST00000354193 TRAV2A0A0B4J234 112 aa8.04□□□□□ -1.12
SVIP-201ENST00000354193 APOC4P55056 127 aa8.04□□□□□ -1.12
SVIP-201ENST00000354193 HERVK_113P61574 105 aa8.04□□□□□ -1.12
SVIP-201ENST00000354193 SFTA2Q6UW10 78 aa8.04□□□□□ -1.12
SVIP-201ENST00000354193 VAMP3Q15836 100 aa8.04□□□□□ -1.12
SVIP-201ENST00000354193 RETNQ9HD89 108 aa8.04□□□□□ -1.12
SVIP-201ENST00000354193 INSL3P51460 131 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms