RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 ZANQ9Y493 2812 aa13.61□□□□□ -0.23
CTSB-202ENST00000353047 C1QTNF4Q9BXJ3 329 aa13.61□□□□□ -0.23
CTSB-202ENST00000353047 RPL13AP40429 203 aaKnown RBP13.6□□□□□ -0.23
CTSB-202ENST00000353047 TRAV13-1A0A0B4J241 112 aa13.6□□□□□ -0.23
CTSB-202ENST00000353047 COX6CP09669 75 aa13.6□□□□□ -0.23
CTSB-202ENST00000353047 IGLV2-18A0A075B6J9 118 aa13.6□□□□□ -0.23
CTSB-202ENST00000353047 C19orf84I3L1E1 186 aa13.6□□□□□ -0.23
CTSB-202ENST00000353047 IGHV4-59P01825 116 aa13.6□□□□□ -0.23
CTSB-202ENST00000353047 TAL2Q16559 108 aa13.6□□□□□ -0.23
CTSB-202ENST00000353047 B5MCH6 92 aa13.59□□□□□ -0.23
CTSB-202ENST00000353047 GAGE2BQ13066 116 aa13.59□□□□□ -0.23
CTSB-202ENST00000353047 GAGE2EQ4V326 116 aa13.59□□□□□ -0.23
CTSB-202ENST00000353047 PPDPFLQ8WWR9 84 aa13.59□□□□□ -0.23
CTSB-202ENST00000353047 GAGE2DQ9UEU5 116 aa13.59□□□□□ -0.23
CTSB-202ENST00000353047 RS1O15537 224 aa13.59□□□□□ -0.23
CTSB-202ENST00000353047 RNASE3P12724 160 aaKnown RBP13.59□□□□□ -0.23
CTSB-202ENST00000353047 PAPPA-AS1Q5QFB9 102 aa13.59□□□□□ -0.23
CTSB-202ENST00000353047 TIMM21Q9BVV7 248 aa13.59□□□□□ -0.23
CTSB-202ENST00000353047 TRBV7-3A0A075B6L6 115 aa13.59□□□□□ -0.23
CTSB-202ENST00000353047 NDUFA4O00483 81 aa13.59□□□□□ -0.23
CTSB-202ENST00000353047 MORN3Q6PF18 240 aaPredicted RBP13.59□□□□□ -0.23
CTSB-202ENST00000353047 C2orf82Q6UX34 121 aa13.59□□□□□ -0.23
CTSB-202ENST00000353047 ZFAND6Q6FIF0 208 aa13.58□□□□□ -0.24
CTSB-202ENST00000353047 NDUFA11Q86Y39 141 aa13.58□□□□□ -0.24
CTSB-202ENST00000353047 FAM223BA6NKX1 122 aa13.58□□□□□ -0.24
CTSB-202ENST00000353047 LMO4P61968 165 aa13.58□□□□□ -0.24
CTSB-202ENST00000353047 FAM223AQ8IWN6 122 aa13.58□□□□□ -0.24
CTSB-202ENST00000353047 Q8N6K4 173 aa13.58□□□□□ -0.24
CTSB-202ENST00000353047 CRYBA4P53673 196 aa13.57□□□□□ -0.24
CTSB-202ENST00000353047 TSPEAR-AS2P59090 65 aa13.57□□□□□ -0.24
CTSB-202ENST00000353047 Q6ZSV7 163 aa13.57□□□□□ -0.24
CTSB-202ENST00000353047 ZNF48Q96MX3 618 aaPredicted RBP13.57□□□□□ -0.24
CTSB-202ENST00000353047 DOPEY1Q5JWR5 2465 aa13.57□□□□□ -0.24
CTSB-202ENST00000353047 CRIP2P52943 208 aaPredicted RBP13.57□□□□□ -0.24
CTSB-202ENST00000353047 NFE4Q86UQ8 179 aa13.56□□□□□ -0.24
CTSB-202ENST00000353047 ZMAT4Q9H898 229 aa13.56□□□□□ -0.24
CTSB-202ENST00000353047 A0A0J9YY99 117 aa13.56□□□□□ -0.24
CTSB-202ENST00000353047 CNFNQ9BYD5 112 aa13.56□□□□□ -0.24
CTSB-202ENST00000353047 C11orf68Q9H3H3 251 aaKnown RBP13.56□□□□□ -0.24
CTSB-202ENST00000353047 XCL2Q9UBD3 114 aa13.56□□□□□ -0.24
CTSB-202ENST00000353047 IGHV4-30-2A0A087WSY4 118 aa13.55□□□□□ -0.24
CTSB-202ENST00000353047 XGP55808 180 aa13.55□□□□□ -0.24
CTSB-202ENST00000353047 CFHR3Q02985 330 aa13.55□□□□□ -0.24
CTSB-202ENST00000353047 C10orf126Q8N4M7 172 aa13.55□□□□□ -0.24
CTSB-202ENST00000353047 RNF183Q96D59 192 aa13.55□□□□□ -0.24
CTSB-202ENST00000353047 M0R2P5 195 aa13.55□□□□□ -0.24
CTSB-202ENST00000353047 CFC1BP0CG36 223 aa13.55□□□□□ -0.24
CTSB-202ENST00000353047 CFC1P0CG37 223 aa13.55□□□□□ -0.24
CTSB-202ENST00000353047 ZNRF2Q8NHG8 242 aa13.55□□□□□ -0.24
CTSB-202ENST00000353047 CLEC2BQ92478 149 aa13.54□□□□□ -0.24
CTSB-202ENST00000353047 NDUFA12Q9UI09 145 aa13.54□□□□□ -0.24
CTSB-202ENST00000353047 HRNRQ86YZ3 2850 aaPredicted RBP13.54□□□□□ -0.24
CTSB-202ENST00000353047 IGHV1OR15-1A0A075B7D0 117 aa13.54□□□□□ -0.24
CTSB-202ENST00000353047 TRAV12-1A0A0B4J245 112 aa13.54□□□□□ -0.24
CTSB-202ENST00000353047 RNASE1P07998 156 aaKnown RBP13.54□□□□□ -0.24
CTSB-202ENST00000353047 TRAV8-4A0A0B4J246 113 aa13.54□□□□□ -0.24
CTSB-202ENST00000353047 TEN1Q86WV5 123 aa13.53□□□□□ -0.24
CTSB-202ENST00000353047 APRG1Q8IVJ8 170 aa13.53□□□□□ -0.24
CTSB-202ENST00000353047 TMEM190Q8WZ59 177 aa13.53□□□□□ -0.24
CTSB-202ENST00000353047 TEX49A0A1B0GTD5 131 aa13.52□□□□□ -0.24
CTSB-202ENST00000353047 USMG5Q96IX5 58 aa13.52□□□□□ -0.25
CTSB-202ENST00000353047 Q6ZUT4 128 aa13.51□□□□□ -0.25
CTSB-202ENST00000353047 MUC4Q99102 2169 aa13.5□□□□□ -0.25
CTSB-202ENST00000353047 TCTEX1D4Q5JR98 221 aa13.5□□□□□ -0.25
CTSB-202ENST00000353047 EBI3Q14213 229 aa13.5□□□□□ -0.25
CTSB-202ENST00000353047 TRGV1A0A0A0MS02 117 aa13.49□□□□□ -0.25
CTSB-202ENST00000353047 I3L3M4 83 aa13.49□□□□□ -0.25
CTSB-202ENST00000353047 DEFB112Q30KQ8 113 aa13.49□□□□□ -0.25
CTSB-202ENST00000353047 CFAP126Q5VTH2 177 aa13.49□□□□□ -0.25
CTSB-202ENST00000353047 ZNF575Q86XF7 245 aa13.49□□□□□ -0.25
CTSB-202ENST00000353047 UCNP55089 124 aa13.49□□□□□ -0.25
CTSB-202ENST00000353047 C11orf71Q6IPW1 123 aa13.49□□□□□ -0.25
CTSB-202ENST00000353047 CHD6Q8TD26 2715 aa13.49□□□□□ -0.25
CTSB-202ENST00000353047 MSMBP08118 114 aa13.48□□□□□ -0.25
CTSB-202ENST00000353047 SLURP1P55000 103 aa13.48□□□□□ -0.25
CTSB-202ENST00000353047 ATXN8Q156A1 80 aa13.48□□□□□ -0.25
CTSB-202ENST00000353047 GPHB5Q86YW7 130 aa13.48□□□□□ -0.25
CTSB-202ENST00000353047 OR13C6PQ8NH95 151 aa13.48□□□□□ -0.25
CTSB-202ENST00000353047 MRPL53Q96EL3 112 aaKnown RBP13.48□□□□□ -0.25
CTSB-202ENST00000353047 TMEM141Q96I45 108 aa13.48□□□□□ -0.25
CTSB-202ENST00000353047 SMCPP49901 116 aaPredicted RBP13.47□□□□□ -0.25
CTSB-202ENST00000353047 CRYGDP07320 174 aa13.47□□□□□ -0.25
CTSB-202ENST00000353047 C15orf53Q8NAA6 179 aa13.47□□□□□ -0.25
CTSB-202ENST00000353047 UTP20O75691 2785 aaKnown RBP13.47□□□□□ -0.25
CTSB-202ENST00000353047 TSHBP01222 138 aa13.46□□□□□ -0.25
CTSB-202ENST00000353047 COL27A1Q8IZC6 1860 aaPredicted RBP13.46□□□□□ -0.25
CTSB-202ENST00000353047 GATA3P23771 443 aa13.46□□□□□ -0.25
CTSB-202ENST00000353047 Q9UF83 564 aa13.46□□□□□ -0.25
CTSB-202ENST00000353047 HOXD3P31249 432 aaPredicted RBP13.46□□□□□ -0.26
CTSB-202ENST00000353047 SRSF2Q01130 221 aaKnown RBP13.46□□□□□ -0.26
CTSB-202ENST00000353047 CIRBPQ14011 172 aaKnown RBP13.46□□□□□ -0.26
CTSB-202ENST00000353047 PRSS47A8MTI9 375 aa13.45□□□□□ -0.26
CTSB-202ENST00000353047 LENEPQ9Y5L5 61 aa13.45□□□□□ -0.26
CTSB-202ENST00000353047 IGHV3-30-3P0DP02 117 aa13.45□□□□□ -0.26
CTSB-202ENST00000353047 TMEM262E9PQX1 116 aa13.45□□□□□ -0.26
CTSB-202ENST00000353047 CARD19Q96LW7 228 aa13.45□□□□□ -0.26
CTSB-202ENST00000353047 IGLV4-69A0A075B6H9 119 aa13.44□□□□□ -0.26
CTSB-202ENST00000353047 C19orf54Q5BKX5 351 aa13.44□□□□□ -0.26
CTSB-202ENST00000353047 RHODO00212 210 aa13.44□□□□□ -0.26
CTSB-202ENST00000353047 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 226.2 ms