RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 PTH2Q96A98 100 aa10.72□□□□□ -0.69
ARHGEF1-202ENST00000347545 APOMO95445 188 aa10.71□□□□□ -0.69
ARHGEF1-202ENST00000347545 DSCR9P59020 149 aa10.71□□□□□ -0.69
ARHGEF1-202ENST00000347545 ZNF56Q15929 161 aa10.71□□□□□ -0.69
ARHGEF1-202ENST00000347545 AMELXQ99217 191 aa10.71□□□□□ -0.69
ARHGEF1-202ENST00000347545 TGFAP01135 160 aa10.71□□□□□ -0.69
ARHGEF1-202ENST00000347545 HOXD3P31249 432 aaPredicted RBP10.71□□□□□ -0.69
ARHGEF1-202ENST00000347545 UBE2D1P51668 147 aa10.71□□□□□ -0.7
ARHGEF1-202ENST00000347545 C18orf65Q6ZTR6 163 aa10.71□□□□□ -0.7
ARHGEF1-202ENST00000347545 ZNF418Q8TF45 676 aaPredicted RBP10.71□□□□□ -0.7
ARHGEF1-202ENST00000347545 NACAE9PAV3 2078 aa10.71□□□□□ -0.7
ARHGEF1-202ENST00000347545 POLQO75417 2590 aa10.7□□□□□ -0.7
ARHGEF1-202ENST00000347545 A0A0J9YY99 117 aa10.7□□□□□ -0.7
ARHGEF1-202ENST00000347545 FSHBP01225 129 aa10.7□□□□□ -0.7
ARHGEF1-202ENST00000347545 NSUN5P1Q3KNT7 163 aa10.7□□□□□ -0.7
ARHGEF1-202ENST00000347545 RNF152Q8N8N0 203 aa10.7□□□□□ -0.7
ARHGEF1-202ENST00000347545 MT-ATP8P03928 68 aa10.69□□□□□ -0.7
ARHGEF1-202ENST00000347545 SCGB1D4Q6XE38 83 aa10.69□□□□□ -0.7
ARHGEF1-202ENST00000347545 VPREB3Q9UKI3 123 aa10.69□□□□□ -0.7
ARHGEF1-202ENST00000347545 HOXA3O43365 443 aaPredicted RBP10.69□□□□□ -0.7
ARHGEF1-202ENST00000347545 ZNF469Q96JG9 3925 aaPredicted RBP10.69□□□□□ -0.7
ARHGEF1-202ENST00000347545 USP9YO00507 2555 aaPredicted RBP10.69□□□□□ -0.7
ARHGEF1-202ENST00000347545 LOC107984156A0A0G2JMH3 177 aa10.69□□□□□ -0.7
ARHGEF1-202ENST00000347545 SPINK8P0C7L1 97 aa10.69□□□□□ -0.7
ARHGEF1-202ENST00000347545 ARL17AQ8IVW1 177 aa10.69□□□□□ -0.7
ARHGEF1-202ENST00000347545 PGPEP1Q9NXJ5 209 aa10.69□□□□□ -0.7
ARHGEF1-202ENST00000347545 MYO18BQ8IUG5 2567 aa10.68□□□□□ -0.7
ARHGEF1-202ENST00000347545 LINC01549A6NIU2 74 aa10.68□□□□□ -0.7
ARHGEF1-202ENST00000347545 PAPPA-AS1Q5QFB9 102 aa10.68□□□□□ -0.7
ARHGEF1-202ENST00000347545 FHL3Q13643 280 aa10.68□□□□□ -0.7
ARHGEF1-202ENST00000347545 Q6YL49 198 aa10.68□□□□□ -0.7
ARHGEF1-202ENST00000347545 NFE4Q86UQ8 179 aa10.68□□□□□ -0.7
ARHGEF1-202ENST00000347545 KNCNA6PVL3 124 aa10.67□□□□□ -0.7
ARHGEF1-202ENST00000347545 J3QLI3 93 aa10.67□□□□□ -0.7
ARHGEF1-202ENST00000347545 TSPAN13O95857 204 aa10.67□□□□□ -0.7
ARHGEF1-202ENST00000347545 PRM2P04554 102 aa10.67□□□□□ -0.7
ARHGEF1-202ENST00000347545 DEFB136Q30KP8 78 aa10.67□□□□□ -0.7
ARHGEF1-202ENST00000347545 TMEM170BQ5T4T1 132 aa10.67□□□□□ -0.7
ARHGEF1-202ENST00000347545 TRPT1Q86TN4 253 aaKnown RBP10.67□□□□□ -0.7
ARHGEF1-202ENST00000347545 CENPEQ02224 2701 aa10.67□□□□□ -0.7
ARHGEF1-202ENST00000347545 RBMY1BA6NDE4 496 aaKnown RBP10.67□□□□□ -0.7
ARHGEF1-202ENST00000347545 RBMY1EA6NEQ0 496 aaKnown RBP10.67□□□□□ -0.7
ARHGEF1-202ENST00000347545 RBMY1DP0C7P1 496 aaKnown RBP10.67□□□□□ -0.7
ARHGEF1-202ENST00000347545 PSMB2P49721 201 aa10.67□□□□□ -0.7
ARHGEF1-202ENST00000347545 RHOHQ15669 191 aa10.67□□□□□ -0.7
ARHGEF1-202ENST00000347545 FAM104AQ969W3 186 aa10.67□□□□□ -0.7
ARHGEF1-202ENST00000347545 ELANEP08246 267 aa10.66□□□□□ -0.7
ARHGEF1-202ENST00000347545 SLURP1P55000 103 aa10.66□□□□□ -0.7
ARHGEF1-202ENST00000347545 UBE2E2Q96LR5 201 aa10.66□□□□□ -0.7
ARHGEF1-202ENST00000347545 BEX4Q9NWD9 120 aaPredicted RBP10.66□□□□□ -0.7
ARHGEF1-202ENST00000347545 MRPL16Q9NX20 251 aaKnown RBP10.66□□□□□ -0.7
ARHGEF1-202ENST00000347545 SMCPP49901 116 aaPredicted RBP10.66□□□□□ -0.7
ARHGEF1-202ENST00000347545 PROK1P58294 105 aa10.66□□□□□ -0.7
ARHGEF1-202ENST00000347545 HERVK_113P61574 105 aa10.66□□□□□ -0.7
ARHGEF1-202ENST00000347545 FOXI1Q12951 378 aa10.66□□□□□ -0.7
ARHGEF1-202ENST00000347545 SRSF9Q13242 221 aaKnown RBP eCLIP10.66□□□□□ -0.7
ARHGEF1-202ENST00000347545 TCTEX1D4Q5JR98 221 aa10.66□□□□□ -0.7
ARHGEF1-202ENST00000347545 C20orf203Q8NBC4 194 aa10.66□□□□□ -0.7
ARHGEF1-202ENST00000347545 IGHV3-30P01768 117 aa10.66□□□□□ -0.7
ARHGEF1-202ENST00000347545 IGHV3-30-5P0DP03 117 aa10.66□□□□□ -0.7
ARHGEF1-202ENST00000347545 CDIP1Q9H305 208 aa10.65□□□□□ -0.7
ARHGEF1-202ENST00000347545 IGHV4-31P0DP07 118 aa10.65□□□□□ -0.7
ARHGEF1-202ENST00000347545 XGP55808 180 aa10.65□□□□□ -0.7
ARHGEF1-202ENST00000347545 Q9UF83 564 aa10.65□□□□□ -0.7
ARHGEF1-202ENST00000347545 TEX15Q9BXT5 2789 aa10.65□□□□□ -0.71
ARHGEF1-202ENST00000347545 TMEM223A0PJW6 202 aa10.64□□□□□ -0.71
ARHGEF1-202ENST00000347545 SLC25A29Q8N8R3 303 aa10.64□□□□□ -0.71
ARHGEF1-202ENST00000347545 IGHV3-73A0A0B4J1V6 119 aa10.64□□□□□ -0.71
ARHGEF1-202ENST00000347545 A8MTW9 85 aa10.64□□□□□ -0.71
ARHGEF1-202ENST00000347545 J3QQQ9 107 aa10.64□□□□□ -0.71
ARHGEF1-202ENST00000347545 HIST2H2BDQ6DRA6 164 aa10.64□□□□□ -0.71
ARHGEF1-202ENST00000347545 NDUFA11Q86Y39 141 aa10.64□□□□□ -0.71
ARHGEF1-202ENST00000347545 RNF183Q96D59 192 aa10.64□□□□□ -0.71
ARHGEF1-202ENST00000347545 IGLV4-3A0A075B6K6 122 aa10.64□□□□□ -0.71
ARHGEF1-202ENST00000347545 I3L3M4 83 aa10.64□□□□□ -0.71
ARHGEF1-202ENST00000347545 EIF4EBP3O60516 100 aaPredicted RBP10.64□□□□□ -0.71
ARHGEF1-202ENST00000347545 PRB1P04280 392 aa10.64□□□□□ -0.71
ARHGEF1-202ENST00000347545 UBR5O95071 2799 aaPredicted RBP10.63□□□□□ -0.71
ARHGEF1-202ENST00000347545 TRGV11A0A075B6L2 103 aa10.63□□□□□ -0.71
ARHGEF1-202ENST00000347545 ZNF22P17026 224 aaPredicted RBP10.63□□□□□ -0.71
ARHGEF1-202ENST00000347545 CFC1BP0CG36 223 aa10.63□□□□□ -0.71
ARHGEF1-202ENST00000347545 CFC1P0CG37 223 aa10.63□□□□□ -0.71
ARHGEF1-202ENST00000347545 KRTAP10-9P60411 292 aa10.63□□□□□ -0.71
ARHGEF1-202ENST00000347545 UBE2D3P61077 147 aa10.63□□□□□ -0.71
ARHGEF1-202ENST00000347545 UBE2D2P62837 147 aa10.63□□□□□ -0.71
ARHGEF1-202ENST00000347545 SS18L2Q9UHA2 77 aa10.63□□□□□ -0.71
ARHGEF1-202ENST00000347545 DEFB131AP59861 70 aa10.62□□□□□ -0.71
ARHGEF1-202ENST00000347545 HTN1P15515 57 aa10.62□□□□□ -0.71
ARHGEF1-202ENST00000347545 Q6ZSN1 163 aa10.62□□□□□ -0.71
ARHGEF1-202ENST00000347545 DUX3Q96PT4 197 aa10.62□□□□□ -0.71
ARHGEF1-202ENST00000347545 A0A0J9YXV3 536 aa10.61□□□□□ -0.71
ARHGEF1-202ENST00000347545 H3BMM0 161 aa10.61□□□□□ -0.71
ARHGEF1-202ENST00000347545 C1QTNF4Q9BXJ3 329 aa10.61□□□□□ -0.71
ARHGEF1-202ENST00000347545 EDA2RQ9HAV5 297 aa10.61□□□□□ -0.71
ARHGEF1-202ENST00000347545 CFAP126Q5VTH2 177 aa10.61□□□□□ -0.71
ARHGEF1-202ENST00000347545 PRRC2AP48634 2157 aaKnown RBP10.61□□□□□ -0.71
ARHGEF1-202ENST00000347545 IGHV3-64A0A075B6Q5 118 aa10.61□□□□□ -0.71
ARHGEF1-202ENST00000347545 RHODO00212 210 aa10.61□□□□□ -0.71
ARHGEF1-202ENST00000347545 LEPROTO15243 131 aa10.61□□□□□ -0.71
ARHGEF1-202ENST00000347545 Q6ZUT4 128 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms