RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 DAZ4Q86SG3 579 aaKnown RBP10.64□□□□□ -0.71
TSPAN4-201ENST00000346501 NEXN-AS1Q8NBZ9 246 aa10.64□□□□□ -0.71
TSPAN4-201ENST00000346501 RMI2Q96E14 147 aa10.64□□□□□ -0.71
TSPAN4-201ENST00000346501 DNAJC30Q96LL9 226 aa10.64□□□□□ -0.71
TSPAN4-201ENST00000346501 DAZ3Q9NR90 486 aaKnown RBP10.64□□□□□ -0.71
TSPAN4-201ENST00000346501 TMEM262E9PQX1 116 aa10.63□□□□□ -0.71
TSPAN4-201ENST00000346501 CTRLP40313 264 aa10.63□□□□□ -0.71
TSPAN4-201ENST00000346501 PEA15Q15121 130 aa10.63□□□□□ -0.71
TSPAN4-201ENST00000346501 CDPF1Q6NVV7 123 aa10.63□□□□□ -0.71
TSPAN4-201ENST00000346501 TEX261Q6UWH6 196 aa10.63□□□□□ -0.71
TSPAN4-201ENST00000346501 FAM231DQ6ZW35 169 aa10.63□□□□□ -0.71
TSPAN4-201ENST00000346501 COX11Q9Y6N1 276 aa10.63□□□□□ -0.71
TSPAN4-201ENST00000346501 KIF25-AS1Q9Y6Z4 181 aa10.63□□□□□ -0.71
TSPAN4-201ENST00000346501 TRBV6-8A0A0A6YYG3 113 aa10.62□□□□□ -0.71
TSPAN4-201ENST00000346501 FAM74A3Q4VXF1 159 aa10.62□□□□□ -0.71
TSPAN4-201ENST00000346501 NIT1Q86X76 327 aa10.62□□□□□ -0.71
TSPAN4-201ENST00000346501 C15orf54Q8N8G6 183 aa10.62□□□□□ -0.71
TSPAN4-201ENST00000346501 HECTD4Q9Y4D8 3996 aa10.62□□□□□ -0.71
TSPAN4-201ENST00000346501 A0A087WTM6 91 aa10.61□□□□□ -0.71
TSPAN4-201ENST00000346501 SRP19P09132 144 aaKnown RBP10.61□□□□□ -0.71
TSPAN4-201ENST00000346501 CT83Q5H943 113 aa10.61□□□□□ -0.71
TSPAN4-201ENST00000346501 RASL11AQ6T310 242 aa10.61□□□□□ -0.71
TSPAN4-201ENST00000346501 CHCHD5Q9BSY4 110 aa10.61□□□□□ -0.71
TSPAN4-201ENST00000346501 TRBV25-1A0A075B6N4 114 aa10.6□□□□□ -0.71
TSPAN4-201ENST00000346501 CNFNQ9BYD5 112 aa10.6□□□□□ -0.71
TSPAN4-201ENST00000346501 SMDT1Q9H4I9 107 aa10.6□□□□□ -0.71
TSPAN4-201ENST00000346501 DNAH2Q9P225 4427 aa10.59□□□□□ -0.71
TSPAN4-201ENST00000346501 M0QY20 66 aa10.59□□□□□ -0.71
TSPAN4-201ENST00000346501 TMEM241Q24JQ0 296 aa10.59□□□□□ -0.71
TSPAN4-201ENST00000346501 SUMO4Q6EEV6 95 aa10.59□□□□□ -0.71
TSPAN4-201ENST00000346501 LINC01551Q86U37 167 aa10.59□□□□□ -0.71
TSPAN4-201ENST00000346501 NIT2Q9NQR4 276 aa10.59□□□□□ -0.71
TSPAN4-201ENST00000346501 KLK12Q9UKR0 248 aa10.59□□□□□ -0.71
TSPAN4-201ENST00000346501 DNAH17Q9UFH2 4485 aa10.59□□□□□ -0.71
TSPAN4-201ENST00000346501 CRPP02741 224 aa10.58□□□□□ -0.72
TSPAN4-201ENST00000346501 KRTAP10-2P60368 255 aa10.58□□□□□ -0.72
TSPAN4-201ENST00000346501 RAB14P61106 215 aa10.58□□□□□ -0.72
TSPAN4-201ENST00000346501 Q0VG73 95 aa10.58□□□□□ -0.72
TSPAN4-201ENST00000346501 FRZBQ92765 325 aa10.58□□□□□ -0.72
TSPAN4-201ENST00000346501 PGLYRP4Q96LB8 373 aa10.58□□□□□ -0.72
TSPAN4-201ENST00000346501 OSTCQ9NRP0 149 aa10.58□□□□□ -0.72
TSPAN4-201ENST00000346501 TSKUQ8WUA8 353 aa10.57□□□□□ -0.72
TSPAN4-201ENST00000346501 UBE2WQ96B02 151 aa10.57□□□□□ -0.72
TSPAN4-201ENST00000346501 GFRA4Q9GZZ7 299 aa10.57□□□□□ -0.72
TSPAN4-201ENST00000346501 FAT2Q9NYQ8 4349 aa10.56□□□□□ -0.72
TSPAN4-201ENST00000346501 IGHV1-24A0A0C4DH33 117 aa10.56□□□□□ -0.72
TSPAN4-201ENST00000346501 FAM231BA6NCW3 169 aa10.56□□□□□ -0.72
TSPAN4-201ENST00000346501 CDK2AP2O75956 126 aa10.56□□□□□ -0.72
TSPAN4-201ENST00000346501 NTN5Q8WTR8 489 aaPredicted RBP10.56□□□□□ -0.72
TSPAN4-201ENST00000346501 GTSF1Q8WW33 167 aa10.56□□□□□ -0.72
TSPAN4-201ENST00000346501 NAT8Q9UHE5 227 aa10.56□□□□□ -0.72
TSPAN4-201ENST00000346501 IGKV2D-24A0A075B6R9 120 aa10.55□□□□□ -0.72
TSPAN4-201ENST00000346501 ANGP03950 147 aaKnown RBP10.55□□□□□ -0.72
TSPAN4-201ENST00000346501 FOXA3P55318 350 aaPredicted RBP10.55□□□□□ -0.72
TSPAN4-201ENST00000346501 ADIRFQ15847 76 aa10.55□□□□□ -0.72
TSPAN4-201ENST00000346501 Q8N3U1 123 aa10.55□□□□□ -0.72
TSPAN4-201ENST00000346501 A0A1B0GUT8 65 aa10.54□□□□□ -0.72
TSPAN4-201ENST00000346501 HIGD1CA8MV81 97 aa10.54□□□□□ -0.72
TSPAN4-201ENST00000346501 COTL1Q14019 142 aa10.54□□□□□ -0.72
TSPAN4-201ENST00000346501 C1orf43Q9BWL3 253 aa10.54□□□□□ -0.72
TSPAN4-201ENST00000346501 IGLV5-52A0A0A0MRZ9 124 aa10.53□□□□□ -0.72
TSPAN4-201ENST00000346501 UBE2L6O14933 153 aa10.53□□□□□ -0.72
TSPAN4-201ENST00000346501 RIGQ13278 110 aa10.53□□□□□ -0.72
TSPAN4-201ENST00000346501 IQCJQ1A5X6 159 aa10.53□□□□□ -0.72
TSPAN4-201ENST00000346501 TMEM243Q9BU79 118 aa10.53□□□□□ -0.72
TSPAN4-201ENST00000346501 LRCOL1A6NCL2 159 aa10.52□□□□□ -0.73
TSPAN4-201ENST00000346501 GAGE6Q13070 117 aa10.52□□□□□ -0.73
TSPAN4-201ENST00000346501 MPV17L2Q567V2 206 aa10.52□□□□□ -0.73
TSPAN4-201ENST00000346501 Q8N814 137 aa10.52□□□□□ -0.73
TSPAN4-201ENST00000346501 ISOC2Q96AB3 205 aa10.52□□□□□ -0.73
TSPAN4-201ENST00000346501 GCSHP23434 173 aa10.51□□□□□ -0.73
TSPAN4-201ENST00000346501 AMTP48728 403 aa10.51□□□□□ -0.73
TSPAN4-201ENST00000346501 RPL23P62829 140 aaKnown RBP10.51□□□□□ -0.73
TSPAN4-201ENST00000346501 ATRAIDQ6UW56 229 aa10.51□□□□□ -0.73
TSPAN4-201ENST00000346501 NTM-AS1Q6ZSK4 140 aa10.51□□□□□ -0.73
TSPAN4-201ENST00000346501 GATD1Q8NB37 220 aa10.51□□□□□ -0.73
TSPAN4-201ENST00000346501 NAT8BQ9UHF3 227 aa10.51□□□□□ -0.73
TSPAN4-201ENST00000346501 HERC2O95714 4834 aa10.51□□□□□ -0.73
TSPAN4-201ENST00000346501 MIAQ16674 131 aa10.5□□□□□ -0.73
TSPAN4-201ENST00000346501 Q8N976 141 aa10.5□□□□□ -0.73
TSPAN4-201ENST00000346501 V9GYV3 84 aa10.5□□□□□ -0.73
TSPAN4-201ENST00000346501 TRAV26-2A0A0B4J265 109 aa10.49□□□□□ -0.73
TSPAN4-201ENST00000346501 RBX1P62877 108 aa10.49□□□□□ -0.73
TSPAN4-201ENST00000346501 C14orf177Q52M58 125 aa10.49□□□□□ -0.73
TSPAN4-201ENST00000346501 TMEM191AQ9H0A3 160 aa10.49□□□□□ -0.73
TSPAN4-201ENST00000346501 PKD1P98161 4303 aa10.48□□□□□ -0.73
TSPAN4-201ENST00000346501 NCR2O95944 276 aa10.48□□□□□ -0.73
TSPAN4-201ENST00000346501 BAALCQ8WXS3 180 aa10.48□□□□□ -0.73
TSPAN4-201ENST00000346501 C9JQL5 133 aa10.47□□□□□ -0.73
TSPAN4-201ENST00000346501 LECT2O14960 151 aa10.47□□□□□ -0.73
TSPAN4-201ENST00000346501 PPP1R17O96001 155 aa10.47□□□□□ -0.73
TSPAN4-201ENST00000346501 PMCHP20382 165 aa10.47□□□□□ -0.73
TSPAN4-201ENST00000346501 FUSP35637 526 aaKnown RBP eCLIP10.47□□□□□ -0.73
TSPAN4-201ENST00000346501 SRSF3P84103 164 aaKnown RBP10.47□□□□□ -0.73
TSPAN4-201ENST00000346501 MAPKAPK5-AS1Q8N8E1 139 aa10.47□□□□□ -0.73
TSPAN4-201ENST00000346501 MRAP2Q96G30 205 aa10.47□□□□□ -0.73
TSPAN4-201ENST00000346501 ST20Q9HBF5 79 aa10.47□□□□□ -0.73
TSPAN4-201ENST00000346501 DNAH11Q96DT5 4516 aa10.46□□□□□ -0.73
TSPAN4-201ENST00000346501 A0A1B0GUV1 79 aa10.46□□□□□ -0.73
TSPAN4-201ENST00000346501 A0A1B0GW15 77 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms