RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 TRAV23DV6A0A075B6W5 121 aa13.72□□□□□ -0.21
SMC4-201ENST00000344722 UPK3BQ9BT76 320 aa13.72□□□□□ -0.21
SMC4-201ENST00000344722 GVINP1Q7Z2Y8 2422 aa13.72□□□□□ -0.21
SMC4-201ENST00000344722 TRIOBPQ9H2D6 2365 aa13.72□□□□□ -0.21
SMC4-201ENST00000344722 A0A096LPF7 62 aa13.71□□□□□ -0.21
SMC4-201ENST00000344722 C16orf74Q96GX8 76 aa13.71□□□□□ -0.21
SMC4-201ENST00000344722 DEFB1P60022 68 aa13.71□□□□□ -0.21
SMC4-201ENST00000344722 C20orf197Q8N268 126 aa13.7□□□□□ -0.22
SMC4-201ENST00000344722 MED13Q9UHV7 2174 aa13.7□□□□□ -0.22
SMC4-201ENST00000344722 CADP27708 2225 aa13.7□□□□□ -0.22
SMC4-201ENST00000344722 CXCL5P42830 114 aa13.7□□□□□ -0.22
SMC4-201ENST00000344722 CEMP1Q6PRD7 247 aaPredicted RBP13.7□□□□□ -0.22
SMC4-201ENST00000344722 GPHB5Q86YW7 130 aa13.7□□□□□ -0.22
SMC4-201ENST00000344722 PRB1P04280 392 aa13.69□□□□□ -0.22
SMC4-201ENST00000344722 APRG1Q8IVJ8 170 aa13.69□□□□□ -0.22
SMC4-201ENST00000344722 LRRC75A-AS1Q8N1F1 130 aa13.69□□□□□ -0.22
SMC4-201ENST00000344722 WFDC9Q8NEX5 89 aa13.69□□□□□ -0.22
SMC4-201ENST00000344722 A0A0J9YX75 114 aa13.68□□□□□ -0.22
SMC4-201ENST00000344722 MP68P56378 58 aa13.68□□□□□ -0.22
SMC4-201ENST00000344722 SEM1Q6ZVN7 128 aa13.68□□□□□ -0.22
SMC4-201ENST00000344722 NRACQ8N912 160 aa13.68□□□□□ -0.22
SMC4-201ENST00000344722 IGLV4-3A0A075B6K6 122 aa13.68□□□□□ -0.22
SMC4-201ENST00000344722 RNF223E7ERA6 249 aa13.68□□□□□ -0.22
SMC4-201ENST00000344722 DEFB105AQ8NG35 78 aa13.68□□□□□ -0.22
SMC4-201ENST00000344722 CCDC140Q96MF4 163 aa13.68□□□□□ -0.22
SMC4-201ENST00000344722 Q6ZQT7 251 aa13.68□□□□□ -0.22
SMC4-201ENST00000344722 VPREB3Q9UKI3 123 aa13.67□□□□□ -0.22
SMC4-201ENST00000344722 UNQ9165/PRO28630Q6UXU0 137 aa13.67□□□□□ -0.22
SMC4-201ENST00000344722 SERP2Q8N6R1 65 aa13.67□□□□□ -0.22
SMC4-201ENST00000344722 LINC00308Q8TCZ7 52 aa13.67□□□□□ -0.22
SMC4-201ENST00000344722 ODF3Q96PU9 254 aa13.67□□□□□ -0.22
SMC4-201ENST00000344722 COX7CP15954 63 aa13.66□□□□□ -0.22
SMC4-201ENST00000344722 NCR3O14931 201 aa13.66□□□□□ -0.22
SMC4-201ENST00000344722 IGHV4-4A0A075B6R2 117 aa13.66□□□□□ -0.22
SMC4-201ENST00000344722 PSCAO43653 123 aa13.66□□□□□ -0.22
SMC4-201ENST00000344722 APOC4P55056 127 aa13.66□□□□□ -0.22
SMC4-201ENST00000344722 IGHV4-59P01825 116 aa13.66□□□□□ -0.22
SMC4-201ENST00000344722 BLCAPP62952 87 aa13.65□□□□□ -0.22
SMC4-201ENST00000344722 LST1O00453 97 aa13.65□□□□□ -0.22
SMC4-201ENST00000344722 DEFB112Q30KQ8 113 aa13.65□□□□□ -0.22
SMC4-201ENST00000344722 TRBV12-3P01733 135 aa13.65□□□□□ -0.22
SMC4-201ENST00000344722 NDUFA1O15239 70 aa13.64□□□□□ -0.23
SMC4-201ENST00000344722 SPRY4Q9C004 299 aa13.64□□□□□ -0.23
SMC4-201ENST00000344722 HHLA3Q9XRX5 114 aa13.64□□□□□ -0.23
SMC4-201ENST00000344722 TIMM17BO60830 172 aa13.64□□□□□ -0.23
SMC4-201ENST00000344722 RPL18AQ02543 176 aaKnown RBP13.64□□□□□ -0.23
SMC4-201ENST00000344722 SVIPQ8NHG7 77 aa13.64□□□□□ -0.23
SMC4-201ENST00000344722 TRBV10-1A0A0K0K1A3 114 aa13.64□□□□□ -0.23
SMC4-201ENST00000344722 SLURP1P55000 103 aa13.64□□□□□ -0.23
SMC4-201ENST00000344722 TMEM263Q8WUH6 116 aaKnown RBP13.64□□□□□ -0.23
SMC4-201ENST00000344722 NUP210LQ5VU65 1888 aa13.64□□□□□ -0.23
SMC4-201ENST00000344722 DAZAP2Q15038 168 aaPredicted RBP13.63□□□□□ -0.23
SMC4-201ENST00000344722 SMAD5-AS1Q9Y6J3 95 aa13.63□□□□□ -0.23
SMC4-201ENST00000344722 GYPEP15421 78 aa13.63□□□□□ -0.23
SMC4-201ENST00000344722 NDUFC2-KCTD14E9PQ53 114 aa13.63□□□□□ -0.23
SMC4-201ENST00000344722 GTF3C1Q12789 2109 aa13.63□□□□□ -0.23
SMC4-201ENST00000344722 PCNX3Q9H6A9 2034 aa13.63□□□□□ -0.23
SMC4-201ENST00000344722 TMEM89A2RUT3 159 aa13.62□□□□□ -0.23
SMC4-201ENST00000344722 ODF3BA8MYP8 253 aa13.62□□□□□ -0.23
SMC4-201ENST00000344722 UBE2DNLQ8IWF7 75 aa13.62□□□□□ -0.23
SMC4-201ENST00000344722 ZMAT4Q9H898 229 aa13.62□□□□□ -0.23
SMC4-201ENST00000344722 DIRC1Q969H9 104 aa13.62□□□□□ -0.23
SMC4-201ENST00000344722 CDKN2A-AS1Q9UH64 79 aa13.62□□□□□ -0.23
SMC4-201ENST00000344722 HIGD2BQ4VC39 106 aa13.62□□□□□ -0.23
SMC4-201ENST00000344722 GRNP28799 593 aaKnown RBP13.62□□□□□ -0.23
SMC4-201ENST00000344722 TRBV27A0A0K0K1C4 114 aa13.61□□□□□ -0.23
SMC4-201ENST00000344722 FAM240AA0A1B0GVK7 77 aa13.61□□□□□ -0.23
SMC4-201ENST00000344722 DEFB136Q30KP8 78 aa13.61□□□□□ -0.23
SMC4-201ENST00000344722 CNOT1A5YKK6 2376 aaKnown RBP13.61□□□□□ -0.23
SMC4-201ENST00000344722 IGHV4-38-2P0DP08 117 aa13.61□□□□□ -0.23
SMC4-201ENST00000344722 SIRPDQ9H106 197 aa13.61□□□□□ -0.23
SMC4-201ENST00000344722 TRBV6-5A0A0K0K1A5 114 aa13.61□□□□□ -0.23
SMC4-201ENST00000344722 CNFNQ9BYD5 112 aa13.61□□□□□ -0.23
SMC4-201ENST00000344722 IGHV4-28A0A0C4DH34 117 aa13.6□□□□□ -0.23
SMC4-201ENST00000344722 PYGO1Q9Y3Y4 419 aa13.6□□□□□ -0.23
SMC4-201ENST00000344722 IGHV4OR15-8A0A075B7B6 117 aa13.6□□□□□ -0.23
SMC4-201ENST00000344722 A0A087WW49 117 aa13.6□□□□□ -0.23
SMC4-201ENST00000344722 M0QY20 66 aa13.6□□□□□ -0.23
SMC4-201ENST00000344722 TIRAPP58753 221 aa13.6□□□□□ -0.23
SMC4-201ENST00000344722 CAMK2N2Q96S95 79 aa13.6□□□□□ -0.23
SMC4-201ENST00000344722 H7C423 109 aa13.59□□□□□ -0.23
SMC4-201ENST00000344722 ENHOQ6UWT2 76 aa13.59□□□□□ -0.23
SMC4-201ENST00000344722 MAPK1IP1LQ8NDC0 245 aa13.59□□□□□ -0.23
SMC4-201ENST00000344722 ETDCA0A1B0GVM5 59 aa13.59□□□□□ -0.23
SMC4-201ENST00000344722 ZFP36P26651 326 aaKnown RBP13.59□□□□□ -0.23
SMC4-201ENST00000344722 PIP4P1Q86T03 277 aa13.59□□□□□ -0.23
SMC4-201ENST00000344722 RMI2Q96E14 147 aa13.59□□□□□ -0.23
SMC4-201ENST00000344722 IGLV10-54A0A075B6I4 117 aa13.59□□□□□ -0.23
SMC4-201ENST00000344722 ZFAND2AQ8N6M9 145 aa13.59□□□□□ -0.23
SMC4-201ENST00000344722 C20orf173Q96LM9 149 aa13.59□□□□□ -0.23
SMC4-201ENST00000344722 ZFAND3Q9H8U3 227 aa13.59□□□□□ -0.23
SMC4-201ENST00000344722 USP17L23D6RBM5 183 aa13.58□□□□□ -0.24
SMC4-201ENST00000344722 Q6ZS46 218 aa13.58□□□□□ -0.24
SMC4-201ENST00000344722 IGF1P05019 195 aa13.58□□□□□ -0.24
SMC4-201ENST00000344722 LINC00694P0DN24 101 aa13.58□□□□□ -0.24
SMC4-201ENST00000344722 ATP5EP56381 51 aaPredicted RBP13.58□□□□□ -0.24
SMC4-201ENST00000344722 LINC00467Q9BRT7 94 aa13.58□□□□□ -0.24
SMC4-201ENST00000344722 CCL24O00175 119 aa13.56□□□□□ -0.24
SMC4-201ENST00000344722 C10orf105Q8TEF2 133 aa13.56□□□□□ -0.24
SMC4-201ENST00000344722 NCOR1O75376 2440 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms