RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 VAMP8Q9BV40 100 aa9.73□□□□□ -0.85
CDC42-202ENST00000344548 TRBV6-5A0A0K0K1A5 114 aa9.73□□□□□ -0.85
CDC42-202ENST00000344548 NUDT3O95989 172 aa9.73□□□□□ -0.85
CDC42-202ENST00000344548 LINC01545Q5VT33 79 aa9.73□□□□□ -0.85
CDC42-202ENST00000344548 PET117Q6UWS5 81 aa9.73□□□□□ -0.85
CDC42-202ENST00000344548 C1QTNF4Q9BXJ3 329 aa9.73□□□□□ -0.85
CDC42-202ENST00000344548 hDV102S1A0JD36 115 aa9.72□□□□□ -0.85
CDC42-202ENST00000344548 RS1O15537 224 aa9.72□□□□□ -0.85
CDC42-202ENST00000344548 WIPF1O43516 503 aa9.72□□□□□ -0.85
CDC42-202ENST00000344548 IGHV3-53P01767 116 aa9.72□□□□□ -0.85
CDC42-202ENST00000344548 PIK3CD-AS1Q5SR53 167 aa9.72□□□□□ -0.85
CDC42-202ENST00000344548 KRTAP10-11P60412 298 aa9.72□□□□□ -0.85
CDC42-202ENST00000344548 TP73-AS1Q9UF72 201 aa9.72□□□□□ -0.85
CDC42-202ENST00000344548 TRBV27A0A0K0K1C4 114 aa9.71□□□□□ -0.85
CDC42-202ENST00000344548 RRN3P1Q2M238 152 aa9.71□□□□□ -0.85
CDC42-202ENST00000344548 SPATA45Q537H7 98 aa9.71□□□□□ -0.85
CDC42-202ENST00000344548 DKK2Q9UBU2 259 aa9.71□□□□□ -0.85
CDC42-202ENST00000344548 TSTD3H0UI37 97 aa9.71□□□□□ -0.86
CDC42-202ENST00000344548 PPP1R17O96001 155 aa9.71□□□□□ -0.86
CDC42-202ENST00000344548 DDTP30046 118 aa9.71□□□□□ -0.86
CDC42-202ENST00000344548 EMP1P54849 157 aa9.71□□□□□ -0.86
CDC42-202ENST00000344548 RPL39P62891 51 aaKnown RBP9.71□□□□□ -0.86
CDC42-202ENST00000344548 ZFP2Q6ZN57 461 aa9.71□□□□□ -0.86
CDC42-202ENST00000344548 X6R8D5 127 aa9.71□□□□□ -0.86
CDC42-202ENST00000344548 ANK2Q01484 3957 aa9.7□□□□□ -0.86
CDC42-202ENST00000344548 VCYO14598 125 aa9.7□□□□□ -0.86
CDC42-202ENST00000344548 DAZ2Q13117 558 aaKnown RBP9.7□□□□□ -0.86
CDC42-202ENST00000344548 C2orf66Q6UXQ4 117 aa9.7□□□□□ -0.86
CDC42-202ENST00000344548 GAGE12BA1L429 117 aa9.7□□□□□ -0.86
CDC42-202ENST00000344548 GAGE7O76087 117 aa9.7□□□□□ -0.86
CDC42-202ENST00000344548 GAGE12FP0CL80 117 aa9.7□□□□□ -0.86
CDC42-202ENST00000344548 GAGE12GP0CL81 117 aa9.7□□□□□ -0.86
CDC42-202ENST00000344548 GAGE12IP0CL82 117 aa9.7□□□□□ -0.86
CDC42-202ENST00000344548 RPL32P62910 135 aaKnown RBP9.7□□□□□ -0.86
CDC42-202ENST00000344548 C12orf54Q6X4T0 127 aa9.7□□□□□ -0.86
CDC42-202ENST00000344548 C16orf74Q96GX8 76 aa9.7□□□□□ -0.86
CDC42-202ENST00000344548 TRAV9-2A0A087WT02 112 aa9.69□□□□□ -0.86
CDC42-202ENST00000344548 TSHBP01222 138 aa9.69□□□□□ -0.86
CDC42-202ENST00000344548 DEFB135Q30KP9 77 aa9.69□□□□□ -0.86
CDC42-202ENST00000344548 ORMDL2Q53FV1 153 aa9.69□□□□□ -0.86
CDC42-202ENST00000344548 NEXN-AS1Q8NBZ9 246 aa9.69□□□□□ -0.86
CDC42-202ENST00000344548 TOMM6Q96B49 74 aa9.69□□□□□ -0.86
CDC42-202ENST00000344548 SHISA2Q6UWI4 295 aa9.68□□□□□ -0.86
CDC42-202ENST00000344548 OR4C5Q8NGB2 326 aa9.68□□□□□ -0.86
CDC42-202ENST00000344548 EDA2RQ9HAV5 297 aa9.68□□□□□ -0.86
CDC42-202ENST00000344548 PRSS1P07477 247 aa9.68□□□□□ -0.86
CDC42-202ENST00000344548 IGHV4-30-4P0DP06 118 aa9.68□□□□□ -0.86
CDC42-202ENST00000344548 TCTAP57738 103 aa9.68□□□□□ -0.86
CDC42-202ENST00000344548 ODF1Q14990 250 aa9.68□□□□□ -0.86
CDC42-202ENST00000344548 C14orf144Q96I85 54 aa9.68□□□□□ -0.86
CDC42-202ENST00000344548 NOTCH1P46531 2555 aa9.67□□□□□ -0.86
CDC42-202ENST00000344548 LGALS9BQ3B8N2 356 aa9.67□□□□□ -0.86
CDC42-202ENST00000344548 ZC2HC1BQ5TFG8 222 aa9.67□□□□□ -0.86
CDC42-202ENST00000344548 LGALS9CQ6DKI2 356 aa9.67□□□□□ -0.86
CDC42-202ENST00000344548 KIR2DL4Q99706 377 aa9.67□□□□□ -0.86
CDC42-202ENST00000344548 OVOL2Q9BRP0 275 aa9.67□□□□□ -0.86
CDC42-202ENST00000344548 IGHV3-38A0A0C4DH36 116 aa9.67□□□□□ -0.86
CDC42-202ENST00000344548 DEFB4AO15263 64 aa9.67□□□□□ -0.86
CDC42-202ENST00000344548 TP53TG1Q9Y2A0 90 aa9.67□□□□□ -0.86
CDC42-202ENST00000344548 C20orf202A1L168 122 aa9.66□□□□□ -0.86
CDC42-202ENST00000344548 K7EMI3 77 aa9.66□□□□□ -0.86
CDC42-202ENST00000344548 STPG4Q8N801 248 aa9.66□□□□□ -0.86
CDC42-202ENST00000344548 SCGB3A1Q96QR1 104 aa9.66□□□□□ -0.86
CDC42-202ENST00000344548 RHODO00212 210 aa9.66□□□□□ -0.86
CDC42-202ENST00000344548 IGLC3P0DOY3 106 aa9.66□□□□□ -0.86
CDC42-202ENST00000344548 RIPPLY3P57055 190 aa9.66□□□□□ -0.86
CDC42-202ENST00000344548 LURAP1LQ8IV03 231 aa9.66□□□□□ -0.86
CDC42-202ENST00000344548 PHLDA1Q8WV24 401 aaPredicted RBP9.66□□□□□ -0.86
CDC42-202ENST00000344548 OPRPNQ99935 248 aaPredicted RBP9.66□□□□□ -0.86
CDC42-202ENST00000344548 H7C1H1 209 aa9.65□□□□□ -0.86
CDC42-202ENST00000344548 I3L3M4 83 aa9.65□□□□□ -0.86
CDC42-202ENST00000344548 SLC25A29Q8N8R3 303 aa9.65□□□□□ -0.86
CDC42-202ENST00000344548 TRGV2A0A075B6R0 118 aa9.65□□□□□ -0.87
CDC42-202ENST00000344548 TRAV4A0A0B4J268 109 aa9.65□□□□□ -0.87
CDC42-202ENST00000344548 IGIPA6NJ69 53 aa9.65□□□□□ -0.87
CDC42-202ENST00000344548 G3V4G9 280 aa9.65□□□□□ -0.87
CDC42-202ENST00000344548 ATP5LO75964 103 aa9.65□□□□□ -0.87
CDC42-202ENST00000344548 MRPL35Q9NZE8 188 aaKnown RBP9.65□□□□□ -0.87
CDC42-202ENST00000344548 TNFRSF18Q9Y5U5 241 aa9.65□□□□□ -0.87
CDC42-202ENST00000344548 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.64□□□□□ -0.87
CDC42-202ENST00000344548 ANKRD39Q53RE8 183 aa9.64□□□□□ -0.87
CDC42-202ENST00000344548 BAALCQ8WXS3 180 aa9.64□□□□□ -0.87
CDC42-202ENST00000344548 NDUFAF3Q9BU61 184 aa9.64□□□□□ -0.87
CDC42-202ENST00000344548 LOC100131303A0A0U1RQF7 123 aa9.63□□□□□ -0.87
CDC42-202ENST00000344548 DEFB130BP0DP73 79 aa9.63□□□□□ -0.87
CDC42-202ENST00000344548 DEFB130AP0DP74 79 aa9.63□□□□□ -0.87
CDC42-202ENST00000344548 ERASQ7Z444 233 aa9.63□□□□□ -0.87
CDC42-202ENST00000344548 ZNRF2Q8NHG8 242 aa9.63□□□□□ -0.87
CDC42-202ENST00000344548 KIR2DL5BQ8NHK3 375 aa9.63□□□□□ -0.87
CDC42-202ENST00000344548 MIEN1Q9BRT3 115 aa9.63□□□□□ -0.87
CDC42-202ENST00000344548 ZMAT4Q9H898 229 aa9.63□□□□□ -0.87
CDC42-202ENST00000344548 HHLA3Q9XRX5 114 aa9.63□□□□□ -0.87
CDC42-202ENST00000344548 CYSLTR1Q9Y271 337 aa9.63□□□□□ -0.87
CDC42-202ENST00000344548 LINC00469Q8N7U9 141 aa9.63□□□□□ -0.87
CDC42-202ENST00000344548 EGFEM1PQ0D2K5 195 aa9.62□□□□□ -0.87
CDC42-202ENST00000344548 C20orf203Q8NBC4 194 aa9.62□□□□□ -0.87
CDC42-202ENST00000344548 OR11H2Q8NH07 326 aa9.62□□□□□ -0.87
CDC42-202ENST00000344548 FAM104AQ969W3 186 aa9.62□□□□□ -0.87
CDC42-202ENST00000344548 NBEAL1Q6ZS30 2694 aa9.62□□□□□ -0.87
CDC42-202ENST00000344548 CEMP1Q6PRD7 247 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms