RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 IGKV2-29A2NJV5 120 aaPredicted RBP10.58□□□□□ -0.72
TRIO-202ENST00000344204 PPDPFQ9H3Y8 114 aa10.58□□□□□ -0.72
TRIO-202ENST00000344204 IGKV1OR2-108A0A075B7D4 117 aa10.58□□□□□ -0.72
TRIO-202ENST00000344204 UBE2E1P51965 193 aa10.57□□□□□ -0.72
TRIO-202ENST00000344204 LYNX1G3V0Z9 82 aa10.57□□□□□ -0.72
TRIO-202ENST00000344204 IGHV3-30-3P0DP02 117 aa10.57□□□□□ -0.72
TRIO-202ENST00000344204 LYNX1P0DP58 116 aa10.57□□□□□ -0.72
TRIO-202ENST00000344204 GNRH2O43555 120 aa10.57□□□□□ -0.72
TRIO-202ENST00000344204 IGHV3-33P01772 117 aa10.57□□□□□ -0.72
TRIO-202ENST00000344204 IGKV1-17P01599 117 aa10.57□□□□□ -0.72
TRIO-202ENST00000344204 TRBV12-3P01733 135 aa10.56□□□□□ -0.72
TRIO-202ENST00000344204 Q6ZSR3 168 aa10.56□□□□□ -0.72
TRIO-202ENST00000344204 USP17L23D6RBM5 183 aa10.56□□□□□ -0.72
TRIO-202ENST00000344204 WI2-2373I1.2A0A1W2PRP0 233 aa10.56□□□□□ -0.72
TRIO-202ENST00000344204 IGHV3-30P01768 117 aa10.56□□□□□ -0.72
TRIO-202ENST00000344204 IGHV3-30-5P0DP03 117 aa10.56□□□□□ -0.72
TRIO-202ENST00000344204 IGHV1-58A0A0C4DH39 117 aa10.56□□□□□ -0.72
TRIO-202ENST00000344204 Q9HAA7 133 aa10.56□□□□□ -0.72
TRIO-202ENST00000344204 NEXN-AS1Q8NBZ9 246 aa10.56□□□□□ -0.72
TRIO-202ENST00000344204 A0A0J9YXY3 114 aa10.56□□□□□ -0.72
TRIO-202ENST00000344204 NKAPP1Q8N9T2 125 aa10.56□□□□□ -0.72
TRIO-202ENST00000344204 LTBP2Q14767 1821 aa10.55□□□□□ -0.72
TRIO-202ENST00000344204 NDUFA4O00483 81 aa10.55□□□□□ -0.72
TRIO-202ENST00000344204 LYPD2Q6UXB3 125 aa10.55□□□□□ -0.72
TRIO-202ENST00000344204 NFE4Q86UQ8 179 aa10.55□□□□□ -0.72
TRIO-202ENST00000344204 LINC00322Q6ZN03 302 aaPredicted RBP10.55□□□□□ -0.72
TRIO-202ENST00000344204 ELANEP08246 267 aa10.55□□□□□ -0.72
TRIO-202ENST00000344204 USP24Q9UPU5 2620 aa10.55□□□□□ -0.72
TRIO-202ENST00000344204 NREPQ16612 68 aa10.55□□□□□ -0.72
TRIO-202ENST00000344204 CMC4P56277 68 aaPredicted RBP10.55□□□□□ -0.72
TRIO-202ENST00000344204 SEC61GP60059 68 aa10.55□□□□□ -0.72
TRIO-202ENST00000344204 A0A0J9YY99 117 aa10.54□□□□□ -0.72
TRIO-202ENST00000344204 PF4P02776 101 aa10.54□□□□□ -0.72
TRIO-202ENST00000344204 PRO0628Q9UI54 55 aa10.54□□□□□ -0.72
TRIO-202ENST00000344204 ENHOQ6UWT2 76 aa10.54□□□□□ -0.72
TRIO-202ENST00000344204 COL4A6Q14031 1691 aa10.54□□□□□ -0.72
TRIO-202ENST00000344204 TEX22C9J3V5 150 aa10.53□□□□□ -0.72
TRIO-202ENST00000344204 BLCAPP62952 87 aa10.53□□□□□ -0.72
TRIO-202ENST00000344204 Q6ZQT7 251 aa10.53□□□□□ -0.72
TRIO-202ENST00000344204 ATP6V0E1O15342 81 aa10.53□□□□□ -0.72
TRIO-202ENST00000344204 LOC107984640A0A0U1RRK4 108 aa10.53□□□□□ -0.72
TRIO-202ENST00000344204 Q0VFX4 171 aa10.53□□□□□ -0.72
TRIO-202ENST00000344204 LYRM9A8MSI8 78 aa10.53□□□□□ -0.72
TRIO-202ENST00000344204 PROP1O75360 226 aa10.52□□□□□ -0.72
TRIO-202ENST00000344204 MLST8Q9BVC4 326 aa10.52□□□□□ -0.72
TRIO-202ENST00000344204 FGF23Q9GZV9 251 aaPredicted RBP10.52□□□□□ -0.73
TRIO-202ENST00000344204 PIK3CD-AS1Q5SR53 167 aa10.52□□□□□ -0.73
TRIO-202ENST00000344204 C7orf69Q9H7B7 122 aa10.52□□□□□ -0.73
TRIO-202ENST00000344204 C17orf82Q86X59 251 aaPredicted RBP10.52□□□□□ -0.73
TRIO-202ENST00000344204 OVOL3O00110 214 aa10.51□□□□□ -0.73
TRIO-202ENST00000344204 ZNRF2Q8NHG8 242 aa10.51□□□□□ -0.73
TRIO-202ENST00000344204 K7EIM0 57 aa10.51□□□□□ -0.73
TRIO-202ENST00000344204 MDFICQ9P1T7 246 aa10.51□□□□□ -0.73
TRIO-202ENST00000344204 TRBV7-3A0A075B6L6 115 aa10.51□□□□□ -0.73
TRIO-202ENST00000344204 H7C423 109 aa10.51□□□□□ -0.73
TRIO-202ENST00000344204 I3L2K1 104 aa10.51□□□□□ -0.73
TRIO-202ENST00000344204 GATA3P23771 443 aa10.51□□□□□ -0.73
TRIO-202ENST00000344204 MBD3L2Q8NHZ7 208 aaPredicted RBP10.51□□□□□ -0.73
TRIO-202ENST00000344204 CDIP1Q9H305 208 aa10.51□□□□□ -0.73
TRIO-202ENST00000344204 IGHV7-4-1A0A0J9YVY3 117 aa10.5□□□□□ -0.73
TRIO-202ENST00000344204 MED14OSP0DP75 135 aa10.5□□□□□ -0.73
TRIO-202ENST00000344204 ZNF672Q499Z4 452 aaPredicted RBP10.5□□□□□ -0.73
TRIO-202ENST00000344204 RETNQ9HD89 108 aa10.5□□□□□ -0.73
TRIO-202ENST00000344204 PIP4P2Q8N4L2 257 aa10.5□□□□□ -0.73
TRIO-202ENST00000344204 SPRY4Q9C004 299 aa10.5□□□□□ -0.73
TRIO-202ENST00000344204 ZNF503-AS2A6NEH8 195 aa10.5□□□□□ -0.73
TRIO-202ENST00000344204 LST1O00453 97 aa10.5□□□□□ -0.73
TRIO-202ENST00000344204 SNURFQ9Y675 71 aa10.49□□□□□ -0.73
TRIO-202ENST00000344204 CLPSL1A2RUU4 121 aa10.49□□□□□ -0.73
TRIO-202ENST00000344204 C9orf47Q6ZRZ4 202 aa10.49□□□□□ -0.73
TRIO-202ENST00000344204 MRPL36Q9P0J6 103 aaKnown RBP10.49□□□□□ -0.73
TRIO-202ENST00000344204 PLA2G5P39877 138 aa10.49□□□□□ -0.73
TRIO-202ENST00000344204 C11orf53Q8IXP5 236 aa10.49□□□□□ -0.73
TRIO-202ENST00000344204 MDS2Q8NDY4 140 aa10.49□□□□□ -0.73
TRIO-202ENST00000344204 SPRY2O43597 315 aa10.49□□□□□ -0.73
TRIO-202ENST00000344204 UBE2E2Q96LR5 201 aa10.48□□□□□ -0.73
TRIO-202ENST00000344204 CHD8Q9HCK8 2581 aa10.48□□□□□ -0.73
TRIO-202ENST00000344204 A0A1W2PRX2 142 aa10.48□□□□□ -0.73
TRIO-202ENST00000344204 ZNF883P0CG24 379 aa10.48□□□□□ -0.73
TRIO-202ENST00000344204 XCL1P47992 114 aa10.48□□□□□ -0.73
TRIO-202ENST00000344204 Q6JHZ5 121 aa10.48□□□□□ -0.73
TRIO-202ENST00000344204 CEP295Q9C0D2 2601 aa10.47□□□□□ -0.73
TRIO-202ENST00000344204 EPOPA6NHQ4 379 aa10.47□□□□□ -0.73
TRIO-202ENST00000344204 NCR3O14931 201 aa10.47□□□□□ -0.73
TRIO-202ENST00000344204 TMEM263Q8WUH6 116 aaKnown RBP10.47□□□□□ -0.73
TRIO-202ENST00000344204 RPL35AP18077 110 aaKnown RBP10.47□□□□□ -0.73
TRIO-202ENST00000344204 LOXP28300 417 aaPredicted RBP10.47□□□□□ -0.73
TRIO-202ENST00000344204 HIST2H2BCQ6DN03 193 aa10.47□□□□□ -0.73
TRIO-202ENST00000344204 HIST2H2BDQ6DRA6 164 aa10.47□□□□□ -0.73
TRIO-202ENST00000344204 G3V318 75 aa10.47□□□□□ -0.73
TRIO-202ENST00000344204 SAA4P35542 130 aa10.47□□□□□ -0.73
TRIO-202ENST00000344204 ZNF561-AS1K7EIQ3 104 aa10.46□□□□□ -0.73
TRIO-202ENST00000344204 COL27A1Q8IZC6 1860 aaPredicted RBP10.46□□□□□ -0.73
TRIO-202ENST00000344204 UBE2D3P61077 147 aa10.46□□□□□ -0.74
TRIO-202ENST00000344204 UBE2D2P62837 147 aa10.46□□□□□ -0.74
TRIO-202ENST00000344204 DIAPH2-AS1Q14236 149 aa10.45□□□□□ -0.74
TRIO-202ENST00000344204 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.45□□□□□ -0.74
TRIO-202ENST00000344204 IGKV1D-37A0A075B6S9 117 aa10.45□□□□□ -0.74
TRIO-202ENST00000344204 DEFB131AP59861 70 aa10.45□□□□□ -0.74
TRIO-202ENST00000344204 CFHR3Q02985 330 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms