RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 ZNF876PQ49A33 203 aa10.75□□□□□ -0.69
TDP2-201ENST00000341060 SCGB1D4Q6XE38 83 aa10.75□□□□□ -0.69
TDP2-201ENST00000341060 ZNF256Q9Y2P7 627 aaPredicted RBP10.75□□□□□ -0.69
TDP2-201ENST00000341060 TRGV11A0A075B6L2 103 aa10.74□□□□□ -0.69
TDP2-201ENST00000341060 IGHV4-31P0DP07 118 aa10.74□□□□□ -0.69
TDP2-201ENST00000341060 EMP1P54849 157 aa10.74□□□□□ -0.69
TDP2-201ENST00000341060 NACAE9PAV3 2078 aa10.74□□□□□ -0.69
TDP2-201ENST00000341060 HOXA3O43365 443 aaPredicted RBP10.73□□□□□ -0.69
TDP2-201ENST00000341060 RRN3P1Q2M238 152 aa10.73□□□□□ -0.69
TDP2-201ENST00000341060 TCTEX1D4Q5JR98 221 aa10.73□□□□□ -0.69
TDP2-201ENST00000341060 PLEKHB2Q96CS7 222 aa10.73□□□□□ -0.69
TDP2-201ENST00000341060 DEFB113Q30KQ7 82 aa10.73□□□□□ -0.69
TDP2-201ENST00000341060 KLHL30-AS1Q8NEE0 82 aa10.73□□□□□ -0.69
TDP2-201ENST00000341060 BEX4Q9NWD9 120 aaPredicted RBP10.73□□□□□ -0.69
TDP2-201ENST00000341060 TMEM238LA0A1B0GVL6 79 aa10.72□□□□□ -0.69
TDP2-201ENST00000341060 A6NJY4 79 aa10.72□□□□□ -0.69
TDP2-201ENST00000341060 ZNRF2Q8NHG8 242 aa10.72□□□□□ -0.69
TDP2-201ENST00000341060 RBMY1A1P0DJD3 496 aaKnown RBP10.72□□□□□ -0.69
TDP2-201ENST00000341060 RBMY1CP0DJD4 496 aa10.72□□□□□ -0.69
TDP2-201ENST00000341060 RBMY1FQ15415 496 aaKnown RBP10.72□□□□□ -0.69
TDP2-201ENST00000341060 TEX15Q9BXT5 2789 aa10.72□□□□□ -0.69
TDP2-201ENST00000341060 PDZD2O15018 2839 aa10.72□□□□□ -0.69
TDP2-201ENST00000341060 F8W1H4 67 aa10.71□□□□□ -0.69
TDP2-201ENST00000341060 P0DMU3 169 aa10.71□□□□□ -0.69
TDP2-201ENST00000341060 FAM231AP0DMU4 169 aa10.71□□□□□ -0.69
TDP2-201ENST00000341060 FAM231CP0DMU5 169 aa10.71□□□□□ -0.69
TDP2-201ENST00000341060 A8MTW9 85 aa10.7□□□□□ -0.7
TDP2-201ENST00000341060 I3L3M4 83 aa10.7□□□□□ -0.7
TDP2-201ENST00000341060 SLURP1P55000 103 aa10.7□□□□□ -0.7
TDP2-201ENST00000341060 SRSF9Q13242 221 aaKnown RBP eCLIP10.7□□□□□ -0.7
TDP2-201ENST00000341060 DEFB136Q30KP8 78 aa10.7□□□□□ -0.7
TDP2-201ENST00000341060 TMEM170BQ5T4T1 132 aa10.7□□□□□ -0.7
TDP2-201ENST00000341060 NFE4Q86UQ8 179 aa10.7□□□□□ -0.7
TDP2-201ENST00000341060 EDA2RQ9HAV5 297 aa10.7□□□□□ -0.7
TDP2-201ENST00000341060 CREBBPQ92793 2442 aa10.7□□□□□ -0.7
TDP2-201ENST00000341060 A0A0J9YY99 117 aa10.7□□□□□ -0.7
TDP2-201ENST00000341060 UBE2D1P51668 147 aa10.7□□□□□ -0.7
TDP2-201ENST00000341060 Q8N2B8 174 aa10.7□□□□□ -0.7
TDP2-201ENST00000341060 C20orf203Q8NBC4 194 aa10.7□□□□□ -0.7
TDP2-201ENST00000341060 KNCNA6PVL3 124 aa10.69□□□□□ -0.7
TDP2-201ENST00000341060 TSPEAR-AS2P59090 65 aa10.69□□□□□ -0.7
TDP2-201ENST00000341060 Q5PR19 223 aa10.69□□□□□ -0.7
TDP2-201ENST00000341060 C18orf65Q6ZTR6 163 aa10.69□□□□□ -0.7
TDP2-201ENST00000341060 H3BMG7 143 aa10.69□□□□□ -0.7
TDP2-201ENST00000341060 DEFB131AP59861 70 aa10.69□□□□□ -0.7
TDP2-201ENST00000341060 SPANXB1Q9NS25 103 aaPredicted RBP10.69□□□□□ -0.7
TDP2-201ENST00000341060 ITPR3Q14573 2671 aa10.68□□□□□ -0.7
TDP2-201ENST00000341060 TRAV2A0A0B4J234 112 aa10.68□□□□□ -0.7
TDP2-201ENST00000341060 H3BMM0 161 aa10.68□□□□□ -0.7
TDP2-201ENST00000341060 PGPEP1Q9NXJ5 209 aa10.68□□□□□ -0.7
TDP2-201ENST00000341060 TEX48A0A1B0GUV7 120 aa10.67□□□□□ -0.7
TDP2-201ENST00000341060 RPL24P83731 157 aaKnown RBP10.67□□□□□ -0.7
TDP2-201ENST00000341060 OPRPNQ99935 248 aaPredicted RBP10.67□□□□□ -0.7
TDP2-201ENST00000341060 NOTCH2Q04721 2471 aa10.67□□□□□ -0.7
TDP2-201ENST00000341060 J3QQQ9 107 aa10.67□□□□□ -0.7
TDP2-201ENST00000341060 Q96MF0 132 aa10.67□□□□□ -0.7
TDP2-201ENST00000341060 AMELXQ99217 191 aa10.67□□□□□ -0.7
TDP2-201ENST00000341060 SPAG8Q99932 426 aaPredicted RBP10.67□□□□□ -0.7
TDP2-201ENST00000341060 MRPL16Q9NX20 251 aaKnown RBP10.67□□□□□ -0.7
TDP2-201ENST00000341060 PEMTQ9UBM1 199 aa10.67□□□□□ -0.7
TDP2-201ENST00000341060 AKAP9Q99996 3911 aa10.66□□□□□ -0.7
TDP2-201ENST00000341060 TMEM61Q8N0U2 210 aa10.66□□□□□ -0.7
TDP2-201ENST00000341060 LRRC75A-AS1Q8N1F1 130 aa10.66□□□□□ -0.7
TDP2-201ENST00000341060 SLC25A29Q8N8R3 303 aa10.66□□□□□ -0.7
TDP2-201ENST00000341060 C4orf3Q8WVX3 66 aa10.66□□□□□ -0.7
TDP2-201ENST00000341060 RBMY1BA6NDE4 496 aaKnown RBP10.66□□□□□ -0.7
TDP2-201ENST00000341060 RBMY1EA6NEQ0 496 aaKnown RBP10.66□□□□□ -0.7
TDP2-201ENST00000341060 RBMY1DP0C7P1 496 aaKnown RBP10.66□□□□□ -0.7
TDP2-201ENST00000341060 HTN1P15515 57 aa10.66□□□□□ -0.7
TDP2-201ENST00000341060 PIK3CD-AS1Q5SR53 167 aa10.66□□□□□ -0.7
TDP2-201ENST00000341060 MYO9AB2RTY4 2548 aa10.66□□□□□ -0.7
TDP2-201ENST00000341060 IGLV4-3A0A075B6K6 122 aa10.65□□□□□ -0.7
TDP2-201ENST00000341060 TMEM223A0PJW6 202 aa10.65□□□□□ -0.7
TDP2-201ENST00000341060 IGHV3-30P01768 117 aa10.65□□□□□ -0.7
TDP2-201ENST00000341060 IGHV3-30-5P0DP03 117 aa10.65□□□□□ -0.7
TDP2-201ENST00000341060 WFDC2Q14508 124 aa10.65□□□□□ -0.7
TDP2-201ENST00000341060 A8MWV9 139 aa10.64□□□□□ -0.71
TDP2-201ENST00000341060 LGALS3P17931 250 aaKnown RBP10.64□□□□□ -0.71
TDP2-201ENST00000341060 COTL1Q14019 142 aa10.64□□□□□ -0.71
TDP2-201ENST00000341060 KRTAP1-3Q8IUG1 177 aa10.64□□□□□ -0.71
TDP2-201ENST00000341060 PRO0461Q9UI25 63 aa10.64□□□□□ -0.71
TDP2-201ENST00000341060 TLN2Q9Y4G6 2542 aa10.64□□□□□ -0.71
TDP2-201ENST00000341060 FLNAP21333 2647 aaKnown RBP10.64□□□□□ -0.71
TDP2-201ENST00000341060 M0R2P5 195 aa10.64□□□□□ -0.71
TDP2-201ENST00000341060 LEPROTO15243 131 aa10.64□□□□□ -0.71
TDP2-201ENST00000341060 ZNF22P17026 224 aaPredicted RBP10.64□□□□□ -0.71
TDP2-201ENST00000341060 GAGE13Q4V321 117 aa10.64□□□□□ -0.71
TDP2-201ENST00000341060 DUX3Q96PT4 197 aa10.64□□□□□ -0.71
TDP2-201ENST00000341060 PYGO1Q9Y3Y4 419 aa10.64□□□□□ -0.71
TDP2-201ENST00000341060 IGHV3-73A0A0B4J1V6 119 aa10.63□□□□□ -0.71
TDP2-201ENST00000341060 RHODO00212 210 aa10.63□□□□□ -0.71
TDP2-201ENST00000341060 TSPAN13O95857 204 aa10.63□□□□□ -0.71
TDP2-201ENST00000341060 NDUFA11Q86Y39 141 aa10.63□□□□□ -0.71
TDP2-201ENST00000341060 WFDC11Q8NEX6 87 aa10.63□□□□□ -0.71
TDP2-201ENST00000341060 VCX2Q9H322 139 aa10.63□□□□□ -0.71
TDP2-201ENST00000341060 PROK1P58294 105 aa10.63□□□□□ -0.71
TDP2-201ENST00000341060 ZNF415Q09FC8 603 aa10.63□□□□□ -0.71
TDP2-201ENST00000341060 PTH2Q96A98 100 aa10.63□□□□□ -0.71
TDP2-201ENST00000341060 MAP6D1Q9H9H5 199 aa10.63□□□□□ -0.71
TDP2-201ENST00000341060 DLX4Q92988 240 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms