RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 ACYP1P07311 99 aa11.24□□□□□ -0.61
RRP1B-201ENST00000340648 CLPSL2Q6UWE3 100 aa11.24□□□□□ -0.61
RRP1B-201ENST00000340648 NRACQ8N912 160 aa11.23□□□□□ -0.61
RRP1B-201ENST00000340648 FAM208BQ5VWN6 2430 aa11.23□□□□□ -0.61
RRP1B-201ENST00000340648 TRACP01848 142 aa11.23□□□□□ -0.61
RRP1B-201ENST00000340648 UFSP1Q6NVU6 142 aa11.23□□□□□ -0.61
RRP1B-201ENST00000340648 IGHV4-30-2A0A087WSY4 118 aa11.23□□□□□ -0.61
RRP1B-201ENST00000340648 UBL5Q9BZL1 73 aa11.23□□□□□ -0.61
RRP1B-201ENST00000340648 PIEZO2Q9H5I5 2752 aa11.22□□□□□ -0.61
RRP1B-201ENST00000340648 IGHV1-58A0A0C4DH39 117 aa11.22□□□□□ -0.61
RRP1B-201ENST00000340648 INSL3P51460 131 aa11.22□□□□□ -0.61
RRP1B-201ENST00000340648 SPANXDQ9BXN6 97 aa11.22□□□□□ -0.61
RRP1B-201ENST00000340648 A0A096LPF7 62 aa11.22□□□□□ -0.61
RRP1B-201ENST00000340648 A0A0J9YXY3 114 aa11.22□□□□□ -0.61
RRP1B-201ENST00000340648 TEX49A0A1B0GTD5 131 aa11.22□□□□□ -0.61
RRP1B-201ENST00000340648 H3BT86 120 aa11.22□□□□□ -0.61
RRP1B-201ENST00000340648 P0DMU3 169 aa11.22□□□□□ -0.61
RRP1B-201ENST00000340648 FAM231AP0DMU4 169 aa11.22□□□□□ -0.61
RRP1B-201ENST00000340648 FAM231CP0DMU5 169 aa11.22□□□□□ -0.61
RRP1B-201ENST00000340648 HAMPP81172 84 aa11.22□□□□□ -0.61
RRP1B-201ENST00000340648 CRLF1O75462 422 aa11.21□□□□□ -0.61
RRP1B-201ENST00000340648 IGHG2P01859 326 aa11.21□□□□□ -0.61
RRP1B-201ENST00000340648 IGHV4OR15-8A0A075B7B6 117 aa11.21□□□□□ -0.61
RRP1B-201ENST00000340648 A0A087WW49 117 aa11.21□□□□□ -0.61
RRP1B-201ENST00000340648 K7EMT4 169 aa11.21□□□□□ -0.61
RRP1B-201ENST00000340648 C5orf38Q86SI9 138 aa11.21□□□□□ -0.61
RRP1B-201ENST00000340648 NFE4Q86UQ8 179 aa11.21□□□□□ -0.61
RRP1B-201ENST00000340648 HERV-K104P63124 156 aa11.21□□□□□ -0.62
RRP1B-201ENST00000340648 ZFAND2AQ8N6M9 145 aa11.21□□□□□ -0.62
RRP1B-201ENST00000340648 TMEM126AQ9H061 195 aa11.21□□□□□ -0.62
RRP1B-201ENST00000340648 VPREB3Q9UKI3 123 aa11.21□□□□□ -0.62
RRP1B-201ENST00000340648 A0A0J9YX75 114 aa11.2□□□□□ -0.62
RRP1B-201ENST00000340648 VSIG2Q96IQ7 327 aa11.2□□□□□ -0.62
RRP1B-201ENST00000340648 SND1-IT1Q9HBX3 110 aa11.2□□□□□ -0.62
RRP1B-201ENST00000340648 EXPH5Q8NEV8 1989 aa11.2□□□□□ -0.62
RRP1B-201ENST00000340648 PTPRQQ9UMZ3 2332 aa11.2□□□□□ -0.62
RRP1B-201ENST00000340648 XCL1P47992 114 aa11.2□□□□□ -0.62
RRP1B-201ENST00000340648 A0A0B4J2C4 111 aa11.19□□□□□ -0.62
RRP1B-201ENST00000340648 HHLA3Q9XRX5 114 aa11.19□□□□□ -0.62
RRP1B-201ENST00000340648 PRR9Q5T870 116 aa11.19□□□□□ -0.62
RRP1B-201ENST00000340648 GPHB5Q86YW7 130 aa11.19□□□□□ -0.62
RRP1B-201ENST00000340648 IGKV3D-7A0A0C4DH55 119 aa11.18□□□□□ -0.62
RRP1B-201ENST00000340648 CITED1Q99966 193 aa11.18□□□□□ -0.62
RRP1B-201ENST00000340648 A0A096LNJ9 63 aa11.18□□□□□ -0.62
RRP1B-201ENST00000340648 Q6ZQT7 251 aa11.18□□□□□ -0.62
RRP1B-201ENST00000340648 J3QLI3 93 aa11.17□□□□□ -0.62
RRP1B-201ENST00000340648 ZNF22P17026 224 aaPredicted RBP11.17□□□□□ -0.62
RRP1B-201ENST00000340648 MIAQ16674 131 aa11.17□□□□□ -0.62
RRP1B-201ENST00000340648 FBXL19-AS1Q494R0 122 aa11.17□□□□□ -0.62
RRP1B-201ENST00000340648 FSTL3O95633 263 aa11.17□□□□□ -0.62
RRP1B-201ENST00000340648 NDUFV3P56181 108 aaKnown RBP11.17□□□□□ -0.62
RRP1B-201ENST00000340648 TRBV7-3A0A075B6L6 115 aa11.17□□□□□ -0.62
RRP1B-201ENST00000340648 CFAP126Q5VTH2 177 aa11.17□□□□□ -0.62
RRP1B-201ENST00000340648 WNK1Q9H4A3 2382 aa11.17□□□□□ -0.62
RRP1B-201ENST00000340648 OTOGLQ3ZCN5 2332 aa11.17□□□□□ -0.62
RRP1B-201ENST00000340648 K7EQD1 137 aa11.16□□□□□ -0.62
RRP1B-201ENST00000340648 MRPS12O15235 138 aaKnown RBP11.16□□□□□ -0.62
RRP1B-201ENST00000340648 EBI3Q14213 229 aa11.16□□□□□ -0.62
RRP1B-201ENST00000340648 SPATA25Q9BR10 227 aa11.16□□□□□ -0.62
RRP1B-201ENST00000340648 ORMDL1Q9P0S3 153 aa11.16□□□□□ -0.62
RRP1B-201ENST00000340648 TMEM223A0PJW6 202 aa11.16□□□□□ -0.62
RRP1B-201ENST00000340648 C10orf105Q8TEF2 133 aa11.16□□□□□ -0.62
RRP1B-201ENST00000340648 CSPG4Q6UVK1 2322 aa11.16□□□□□ -0.62
RRP1B-201ENST00000340648 LMO4P61968 165 aa11.15□□□□□ -0.62
RRP1B-201ENST00000340648 DPH3Q96FX2 82 aa11.15□□□□□ -0.62
RRP1B-201ENST00000340648 NBL1P41271 181 aa11.15□□□□□ -0.62
RRP1B-201ENST00000340648 Q96MF0 132 aa11.15□□□□□ -0.62
RRP1B-201ENST00000340648 RPL32P62910 135 aaKnown RBP11.15□□□□□ -0.62
RRP1B-201ENST00000340648 MUC6Q6W4X9 2439 aa11.15□□□□□ -0.62
RRP1B-201ENST00000340648 ACACBO00763 2458 aa11.15□□□□□ -0.62
RRP1B-201ENST00000340648 CNFNQ9BYD5 112 aa11.15□□□□□ -0.62
RRP1B-201ENST00000340648 TRAV4A0A0B4J268 109 aa11.14□□□□□ -0.63
RRP1B-201ENST00000340648 IGHV3-33P01772 117 aa11.14□□□□□ -0.63
RRP1B-201ENST00000340648 DSCAMO60469 2012 aa11.14□□□□□ -0.63
RRP1B-201ENST00000340648 ARHGAP32A7KAX9 2087 aa11.14□□□□□ -0.63
RRP1B-201ENST00000340648 IGLV4-3A0A075B6K6 122 aa11.14□□□□□ -0.63
RRP1B-201ENST00000340648 IGHV3-30P01768 117 aa11.14□□□□□ -0.63
RRP1B-201ENST00000340648 IGHV3-30-5P0DP03 117 aa11.14□□□□□ -0.63
RRP1B-201ENST00000340648 Q6ZS46 218 aa11.14□□□□□ -0.63
RRP1B-201ENST00000340648 TRIAP1O43715 76 aa11.14□□□□□ -0.63
RRP1B-201ENST00000340648 COX7B2Q8TF08 81 aa11.14□□□□□ -0.63
RRP1B-201ENST00000340648 ANGP03950 147 aaKnown RBP11.14□□□□□ -0.63
RRP1B-201ENST00000340648 F5H768 121 aa11.13□□□□□ -0.63
RRP1B-201ENST00000340648 Q9HAA7 133 aa11.13□□□□□ -0.63
RRP1B-201ENST00000340648 C2CD3Q4AC94 2353 aa11.13□□□□□ -0.63
RRP1B-201ENST00000340648 A6NDX4 124 aa11.13□□□□□ -0.63
RRP1B-201ENST00000340648 XGP55808 180 aa11.13□□□□□ -0.63
RRP1B-201ENST00000340648 A0A1B0GX51 115 aa11.13□□□□□ -0.63
RRP1B-201ENST00000340648 RNF152Q8N8N0 203 aa11.13□□□□□ -0.63
RRP1B-201ENST00000340648 DAZ2Q13117 558 aaKnown RBP11.13□□□□□ -0.63
RRP1B-201ENST00000340648 DAZ4Q86SG3 579 aaKnown RBP11.13□□□□□ -0.63
RRP1B-201ENST00000340648 NRGNQ92686 78 aa11.13□□□□□ -0.63
RRP1B-201ENST00000340648 DAZ3Q9NR90 486 aaKnown RBP11.13□□□□□ -0.63
RRP1B-201ENST00000340648 RNASE3P12724 160 aaKnown RBP11.12□□□□□ -0.63
RRP1B-201ENST00000340648 H0YGX0 51 aa11.12□□□□□ -0.63
RRP1B-201ENST00000340648 M0QY20 66 aa11.12□□□□□ -0.63
RRP1B-201ENST00000340648 LECT2O14960 151 aa11.12□□□□□ -0.63
RRP1B-201ENST00000340648 Q8N6K4 173 aa11.12□□□□□ -0.63
RRP1B-201ENST00000340648 DSCR8Q96T75 97 aa11.11□□□□□ -0.63
RRP1B-201ENST00000340648 TNFRSF13BO14836 293 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms