RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 A0A1B0GV90 55 aa10.51□□□□□ -0.73
CDK5RAP3-201ENST00000338399 FABP4P15090 132 aa10.51□□□□□ -0.73
CDK5RAP3-201ENST00000338399 ZFP2Q6ZN57 461 aa10.51□□□□□ -0.73
CDK5RAP3-201ENST00000338399 FA2HQ7L5A8 372 aa10.51□□□□□ -0.73
CDK5RAP3-201ENST00000338399 PACRGQ96M98 296 aaPredicted RBP10.51□□□□□ -0.73
CDK5RAP3-201ENST00000338399 HIST1H2BLQ99880 126 aa10.51□□□□□ -0.73
CDK5RAP3-201ENST00000338399 TP53TG1Q9Y2A0 90 aa10.51□□□□□ -0.73
CDK5RAP3-201ENST00000338399 HSBP1O75506 76 aa10.51□□□□□ -0.73
CDK5RAP3-201ENST00000338399 PPP1R17O96001 155 aa10.51□□□□□ -0.73
CDK5RAP3-201ENST00000338399 DEFB130BP0DP73 79 aa10.51□□□□□ -0.73
CDK5RAP3-201ENST00000338399 DEFB130AP0DP74 79 aa10.51□□□□□ -0.73
CDK5RAP3-201ENST00000338399 LBHQ53QV2 105 aaPredicted RBP10.51□□□□□ -0.73
CDK5RAP3-201ENST00000338399 FAM222AQ5U5X8 452 aa10.51□□□□□ -0.73
CDK5RAP3-201ENST00000338399 FAM19A2Q8N3H0 131 aa10.51□□□□□ -0.73
CDK5RAP3-201ENST00000338399 CHCHD1Q96BP2 118 aaKnown RBP10.51□□□□□ -0.73
CDK5RAP3-201ENST00000338399 NBEAL1Q6ZS30 2694 aa10.5□□□□□ -0.73
CDK5RAP3-201ENST00000338399 PRSS47A8MTI9 375 aa10.5□□□□□ -0.73
CDK5RAP3-201ENST00000338399 PMCHP20382 165 aa10.5□□□□□ -0.73
CDK5RAP3-201ENST00000338399 SUMO2P61956 95 aaKnown RBP10.5□□□□□ -0.73
CDK5RAP3-201ENST00000338399 SBSPONQ8IVN8 264 aa10.5□□□□□ -0.73
CDK5RAP3-201ENST00000338399 C20orf78Q9BR46 151 aa10.5□□□□□ -0.73
CDK5RAP3-201ENST00000338399 C2orf88Q9BSF0 95 aa10.5□□□□□ -0.73
CDK5RAP3-201ENST00000338399 P0DMU3 169 aa10.49□□□□□ -0.73
CDK5RAP3-201ENST00000338399 FAM231AP0DMU4 169 aa10.49□□□□□ -0.73
CDK5RAP3-201ENST00000338399 FAM231CP0DMU5 169 aa10.49□□□□□ -0.73
CDK5RAP3-201ENST00000338399 JOSD1Q15040 202 aaPredicted RBP10.49□□□□□ -0.73
CDK5RAP3-201ENST00000338399 LINC00612Q8N6U2 182 aa10.49□□□□□ -0.73
CDK5RAP3-201ENST00000338399 ST20Q9HBF5 79 aa10.49□□□□□ -0.73
CDK5RAP3-201ENST00000338399 NXT2Q9NPJ8 142 aaKnown RBP10.49□□□□□ -0.73
CDK5RAP3-201ENST00000338399 AP5S1Q9NUS5 200 aa10.49□□□□□ -0.73
CDK5RAP3-201ENST00000338399 IGLV2-18A0A075B6J9 118 aa10.49□□□□□ -0.73
CDK5RAP3-201ENST00000338399 LYRM9A8MSI8 78 aa10.49□□□□□ -0.73
CDK5RAP3-201ENST00000338399 H7C1H1 209 aa10.49□□□□□ -0.73
CDK5RAP3-201ENST00000338399 AMTP48728 403 aa10.49□□□□□ -0.73
CDK5RAP3-201ENST00000338399 PMCHL1Q16048 86 aa10.49□□□□□ -0.73
CDK5RAP3-201ENST00000338399 Q8N8P6 123 aa10.49□□□□□ -0.73
CDK5RAP3-201ENST00000338399 TMEM18Q96B42 140 aa10.49□□□□□ -0.73
CDK5RAP3-201ENST00000338399 EDA2RQ9HAV5 297 aa10.49□□□□□ -0.73
CDK5RAP3-201ENST00000338399 DKK2Q9UBU2 259 aa10.49□□□□□ -0.73
CDK5RAP3-201ENST00000338399 MRAPQ8TCY5 172 aa10.48□□□□□ -0.73
CDK5RAP3-201ENST00000338399 SMIM2Q9BVW6 85 aa10.48□□□□□ -0.73
CDK5RAP3-201ENST00000338399 PRO1933Q9H354 126 aa10.48□□□□□ -0.73
CDK5RAP3-201ENST00000338399 Q9UF83 564 aa10.47□□□□□ -0.73
CDK5RAP3-201ENST00000338399 CELA1Q9UNI1 258 aa10.47□□□□□ -0.73
CDK5RAP3-201ENST00000338399 DNHD1Q96M86 4753 aa10.47□□□□□ -0.73
CDK5RAP3-201ENST00000338399 IGHV1-24A0A0C4DH33 117 aa10.47□□□□□ -0.73
CDK5RAP3-201ENST00000338399 TRBV6-5A0A0K0K1A5 114 aa10.47□□□□□ -0.73
CDK5RAP3-201ENST00000338399 NEGR1Q7Z3B1 354 aa10.47□□□□□ -0.73
CDK5RAP3-201ENST00000338399 TMEM70Q9BUB7 260 aa10.47□□□□□ -0.73
CDK5RAP3-201ENST00000338399 SDHAF1A6NFY7 115 aa10.46□□□□□ -0.74
CDK5RAP3-201ENST00000338399 TCAPO15273 167 aa10.46□□□□□ -0.74
CDK5RAP3-201ENST00000338399 CIDEAO60543 219 aa10.46□□□□□ -0.74
CDK5RAP3-201ENST00000338399 POLR2KP53803 58 aaKnown RBP10.46□□□□□ -0.74
CDK5RAP3-201ENST00000338399 C18orf15Q96N68 181 aa10.46□□□□□ -0.74
CDK5RAP3-201ENST00000338399 TRGV4A0A0C4DH28 118 aa10.45□□□□□ -0.74
CDK5RAP3-201ENST00000338399 FHL2Q14192 279 aa10.45□□□□□ -0.74
CDK5RAP3-201ENST00000338399 NEXN-AS1Q8NBZ9 246 aa10.45□□□□□ -0.74
CDK5RAP3-201ENST00000338399 LINC01546A6NGU7 62 aa10.44□□□□□ -0.74
CDK5RAP3-201ENST00000338399 SPART-AS1P0CW21 52 aa10.44□□□□□ -0.74
CDK5RAP3-201ENST00000338399 DAD1P61803 113 aa10.44□□□□□ -0.74
CDK5RAP3-201ENST00000338399 SLC25A29Q8N8R3 303 aa10.44□□□□□ -0.74
CDK5RAP3-201ENST00000338399 DEFB104AQ8WTQ1 72 aa10.44□□□□□ -0.74
CDK5RAP3-201ENST00000338399 TNFRSF18Q9Y5U5 241 aa10.44□□□□□ -0.74
CDK5RAP3-201ENST00000338399 K7EQD1 137 aa10.44□□□□□ -0.74
CDK5RAP3-201ENST00000338399 VCYO14598 125 aa10.44□□□□□ -0.74
CDK5RAP3-201ENST00000338399 RPL32P62910 135 aaKnown RBP10.44□□□□□ -0.74
CDK5RAP3-201ENST00000338399 SPATA25Q9BR10 227 aa10.44□□□□□ -0.74
CDK5RAP3-201ENST00000338399 LAGE3Q14657 143 aa10.43□□□□□ -0.74
CDK5RAP3-201ENST00000338399 TM2D3Q9BRN9 247 aa10.43□□□□□ -0.74
CDK5RAP3-201ENST00000338399 A0A096LNJ9 63 aa10.42□□□□□ -0.74
CDK5RAP3-201ENST00000338399 TRBV27A0A0K0K1C4 114 aa10.42□□□□□ -0.74
CDK5RAP3-201ENST00000338399 DNAJC30Q96LL9 226 aa10.42□□□□□ -0.74
CDK5RAP3-201ENST00000338399 ZNF664Q8N3J9 261 aa10.42□□□□□ -0.74
CDK5RAP3-201ENST00000338399 TRBV6-4A0A1B0GX49 114 aa10.41□□□□□ -0.74
CDK5RAP3-201ENST00000338399 HBDP02042 147 aa10.41□□□□□ -0.74
CDK5RAP3-201ENST00000338399 ZNRF2Q8NHG8 242 aa10.41□□□□□ -0.74
CDK5RAP3-201ENST00000338399 KIR2DL4Q99706 377 aa10.41□□□□□ -0.74
CDK5RAP3-201ENST00000338399 C11orf68Q9H3H3 251 aaKnown RBP10.41□□□□□ -0.74
CDK5RAP3-201ENST00000338399 TRBV10-1A0A0K0K1A3 114 aa10.4□□□□□ -0.74
CDK5RAP3-201ENST00000338399 I3L3M4 83 aa10.4□□□□□ -0.74
CDK5RAP3-201ENST00000338399 LEPROTL1O95214 131 aa10.4□□□□□ -0.74
CDK5RAP3-201ENST00000338399 FCER1GP30273 86 aa10.4□□□□□ -0.74
CDK5RAP3-201ENST00000338399 HHLA3Q9XRX5 114 aa10.4□□□□□ -0.74
CDK5RAP3-201ENST00000338399 A0A0J9YWU9 116 aa10.4□□□□□ -0.75
CDK5RAP3-201ENST00000338399 LOC100131303A0A0U1RQF7 123 aa10.4□□□□□ -0.75
CDK5RAP3-201ENST00000338399 TEX48A0A1B0GUV7 120 aa10.4□□□□□ -0.75
CDK5RAP3-201ENST00000338399 K7EMI3 77 aa10.4□□□□□ -0.75
CDK5RAP3-201ENST00000338399 NUDT3O95989 172 aa10.4□□□□□ -0.75
CDK5RAP3-201ENST00000338399 RPL36AP83881 106 aaKnown RBP10.4□□□□□ -0.75
CDK5RAP3-201ENST00000338399 ORMDL2Q53FV1 153 aa10.4□□□□□ -0.75
CDK5RAP3-201ENST00000338399 LINC00173Q6ZV60 143 aa10.4□□□□□ -0.75
CDK5RAP3-201ENST00000338399 PHLDA1Q8WV24 401 aaPredicted RBP10.4□□□□□ -0.75
CDK5RAP3-201ENST00000338399 RPL36ALQ969Q0 106 aaKnown RBP10.4□□□□□ -0.75
CDK5RAP3-201ENST00000338399 TRBV7-3A0A075B6L6 115 aa10.39□□□□□ -0.75
CDK5RAP3-201ENST00000338399 GAGE12JA6NER3 117 aa10.39□□□□□ -0.75
CDK5RAP3-201ENST00000338399 ATP5G1P05496 136 aa10.39□□□□□ -0.75
CDK5RAP3-201ENST00000338399 BTF3P20290 206 aaKnown RBP10.39□□□□□ -0.75
CDK5RAP3-201ENST00000338399 GAGE1Q13065 139 aa10.39□□□□□ -0.75
CDK5RAP3-201ENST00000338399 GAGE4Q13068 117 aa10.39□□□□□ -0.75
CDK5RAP3-201ENST00000338399 GAGE5Q13069 117 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms