RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 ZFP2Q6ZN57 461 aa10.49□□□□□ -0.73
CBX3-201ENST00000337620 Q6ZSN1 163 aa10.49□□□□□ -0.73
CBX3-201ENST00000337620 C20orf78Q9BR46 151 aa10.49□□□□□ -0.73
CBX3-201ENST00000337620 ST20Q9HBF5 79 aa10.49□□□□□ -0.73
CBX3-201ENST00000337620 NXT2Q9NPJ8 142 aaKnown RBP10.49□□□□□ -0.73
CBX3-201ENST00000337620 KPRPQ5T749 579 aaPredicted RBP10.49□□□□□ -0.73
CBX3-201ENST00000337620 Q8N8P6 123 aa10.49□□□□□ -0.73
CBX3-201ENST00000337620 PRSS47A8MTI9 375 aa10.48□□□□□ -0.73
CBX3-201ENST00000337620 H7C1H1 209 aa10.48□□□□□ -0.73
CBX3-201ENST00000337620 P0DMU3 169 aa10.48□□□□□ -0.73
CBX3-201ENST00000337620 FAM231AP0DMU4 169 aa10.48□□□□□ -0.73
CBX3-201ENST00000337620 FAM231CP0DMU5 169 aa10.48□□□□□ -0.73
CBX3-201ENST00000337620 DEFB121Q5J5C9 76 aa10.48□□□□□ -0.73
CBX3-201ENST00000337620 RETNQ9HD89 108 aa10.48□□□□□ -0.73
CBX3-201ENST00000337620 IGHV1-24A0A0C4DH33 117 aa10.48□□□□□ -0.73
CBX3-201ENST00000337620 K7EIL1 84 aa10.48□□□□□ -0.73
CBX3-201ENST00000337620 Q8NAQ8 132 aa10.48□□□□□ -0.73
CBX3-201ENST00000337620 SMIM2Q9BVW6 85 aa10.48□□□□□ -0.73
CBX3-201ENST00000337620 NIT2Q9NQR4 276 aa10.48□□□□□ -0.73
CBX3-201ENST00000337620 IGLV2-18A0A075B6J9 118 aa10.47□□□□□ -0.73
CBX3-201ENST00000337620 FAM222AQ5U5X8 452 aa10.47□□□□□ -0.73
CBX3-201ENST00000337620 TCAPO15273 167 aa10.46□□□□□ -0.73
CBX3-201ENST00000337620 NEGR1Q7Z3B1 354 aa10.46□□□□□ -0.73
CBX3-201ENST00000337620 SDHAF1A6NFY7 115 aa10.46□□□□□ -0.74
CBX3-201ENST00000337620 TMEM70Q9BUB7 260 aa10.46□□□□□ -0.74
CBX3-201ENST00000337620 TP53TG1Q9Y2A0 90 aa10.46□□□□□ -0.74
CBX3-201ENST00000337620 TRBV6-5A0A0K0K1A5 114 aa10.45□□□□□ -0.74
CBX3-201ENST00000337620 LYRM9A8MSI8 78 aa10.45□□□□□ -0.74
CBX3-201ENST00000337620 DEFB104AQ8WTQ1 72 aa10.45□□□□□ -0.74
CBX3-201ENST00000337620 EDA2RQ9HAV5 297 aa10.45□□□□□ -0.74
CBX3-201ENST00000337620 Q9UF83 564 aa10.45□□□□□ -0.74
CBX3-201ENST00000337620 POLR2KP53803 58 aaKnown RBP10.45□□□□□ -0.74
CBX3-201ENST00000337620 SBSPONQ8IVN8 264 aa10.45□□□□□ -0.74
CBX3-201ENST00000337620 DKK2Q9UBU2 259 aa10.45□□□□□ -0.74
CBX3-201ENST00000337620 TNFRSF18Q9Y5U5 241 aa10.45□□□□□ -0.74
CBX3-201ENST00000337620 TRGV4A0A0C4DH28 118 aa10.44□□□□□ -0.74
CBX3-201ENST00000337620 VCYO14598 125 aa10.44□□□□□ -0.74
CBX3-201ENST00000337620 LAGE3Q14657 143 aa10.44□□□□□ -0.74
CBX3-201ENST00000337620 LINC00612Q8N6U2 182 aa10.44□□□□□ -0.74
CBX3-201ENST00000337620 DNHD1Q96M86 4753 aa10.43□□□□□ -0.74
CBX3-201ENST00000337620 LINC01546A6NGU7 62 aa10.43□□□□□ -0.74
CBX3-201ENST00000337620 MRAPQ8TCY5 172 aa10.43□□□□□ -0.74
CBX3-201ENST00000337620 CIDEAO60543 219 aa10.43□□□□□ -0.74
CBX3-201ENST00000337620 LEPROTL1O95214 131 aa10.43□□□□□ -0.74
CBX3-201ENST00000337620 SLC25A29Q8N8R3 303 aa10.43□□□□□ -0.74
CBX3-201ENST00000337620 NEXN-AS1Q8NBZ9 246 aa10.43□□□□□ -0.74
CBX3-201ENST00000337620 CELA1Q9UNI1 258 aa10.43□□□□□ -0.74
CBX3-201ENST00000337620 A0A096LNJ9 63 aa10.42□□□□□ -0.74
CBX3-201ENST00000337620 LINC00587B1AMM8 73 aa10.42□□□□□ -0.74
CBX3-201ENST00000337620 K7EQD1 137 aa10.42□□□□□ -0.74
CBX3-201ENST00000337620 RPL32P62910 135 aaKnown RBP10.42□□□□□ -0.74
CBX3-201ENST00000337620 KIR2DL4Q99706 377 aa10.42□□□□□ -0.74
CBX3-201ENST00000337620 TRBV27A0A0K0K1C4 114 aa10.42□□□□□ -0.74
CBX3-201ENST00000337620 HBDP02042 147 aa10.42□□□□□ -0.74
CBX3-201ENST00000337620 SPART-AS1P0CW21 52 aa10.42□□□□□ -0.74
CBX3-201ENST00000337620 DAD1P61803 113 aa10.42□□□□□ -0.74
CBX3-201ENST00000337620 FHL2Q14192 279 aa10.42□□□□□ -0.74
CBX3-201ENST00000337620 NUDT3O95989 172 aa10.41□□□□□ -0.74
CBX3-201ENST00000337620 SMIM6P0DI80 62 aa10.41□□□□□ -0.74
CBX3-201ENST00000337620 BTF3P20290 206 aaKnown RBP10.41□□□□□ -0.74
CBX3-201ENST00000337620 FCER1GP30273 86 aa10.41□□□□□ -0.74
CBX3-201ENST00000337620 KRTDAPP60985 99 aa10.41□□□□□ -0.74
CBX3-201ENST00000337620 LINC00173Q6ZV60 143 aa10.41□□□□□ -0.74
CBX3-201ENST00000337620 C18orf15Q96N68 181 aa10.41□□□□□ -0.74
CBX3-201ENST00000337620 ORMDL2Q53FV1 153 aa10.4□□□□□ -0.74
CBX3-201ENST00000337620 ZNRF2Q8NHG8 242 aa10.4□□□□□ -0.74
CBX3-201ENST00000337620 DNAJC30Q96LL9 226 aa10.4□□□□□ -0.74
CBX3-201ENST00000337620 I3L3M4 83 aa10.4□□□□□ -0.74
CBX3-201ENST00000337620 K7EMI3 77 aa10.39□□□□□ -0.75
CBX3-201ENST00000337620 KRTAP21-3Q3LHN1 58 aa10.39□□□□□ -0.75
CBX3-201ENST00000337620 PYY3Q5JQD4 70 aa10.39□□□□□ -0.75
CBX3-201ENST00000337620 HSPB8Q9UJY1 196 aa10.39□□□□□ -0.75
CBX3-201ENST00000337620 TRBV10-1A0A0K0K1A3 114 aa10.39□□□□□ -0.75
CBX3-201ENST00000337620 TRBV6-4A0A1B0GX49 114 aa10.39□□□□□ -0.75
CBX3-201ENST00000337620 C3orf79P0CE67 100 aa10.39□□□□□ -0.75
CBX3-201ENST00000337620 RPL36AP83881 106 aaKnown RBP10.39□□□□□ -0.75
CBX3-201ENST00000337620 RPL36ALQ969Q0 106 aaKnown RBP10.39□□□□□ -0.75
CBX3-201ENST00000337620 HHLA3Q9XRX5 114 aa10.39□□□□□ -0.75
CBX3-201ENST00000337620 TRBV7-3A0A075B6L6 115 aa10.38□□□□□ -0.75
CBX3-201ENST00000337620 GAGE12JA6NER3 117 aa10.38□□□□□ -0.75
CBX3-201ENST00000337620 GAGE1Q13065 139 aa10.38□□□□□ -0.75
CBX3-201ENST00000337620 GAGE4Q13068 117 aa10.38□□□□□ -0.75
CBX3-201ENST00000337620 GAGE5Q13069 117 aa10.38□□□□□ -0.75
CBX3-201ENST00000337620 GAGE13Q4V321 117 aa10.38□□□□□ -0.75
CBX3-201ENST00000337620 PHLDA1Q8WV24 401 aaPredicted RBP10.38□□□□□ -0.75
CBX3-201ENST00000337620 SPATA25Q9BR10 227 aa10.38□□□□□ -0.75
CBX3-201ENST00000337620 IGHV3-38A0A0C4DH36 116 aa10.37□□□□□ -0.75
CBX3-201ENST00000337620 SCGB1D1O95968 90 aa10.37□□□□□ -0.75
CBX3-201ENST00000337620 LOC100131303A0A0U1RQF7 123 aa10.37□□□□□ -0.75
CBX3-201ENST00000337620 TSHBP01222 138 aa10.37□□□□□ -0.75
CBX3-201ENST00000337620 JOSD1Q15040 202 aaPredicted RBP10.37□□□□□ -0.75
CBX3-201ENST00000337620 RHOHQ15669 191 aa10.37□□□□□ -0.75
CBX3-201ENST00000337620 PRADC1Q9BSG0 188 aa10.37□□□□□ -0.75
CBX3-201ENST00000337620 H0Y8G0 127 aa10.36□□□□□ -0.75
CBX3-201ENST00000337620 TM2D3Q9BRN9 247 aa10.36□□□□□ -0.75
CBX3-201ENST00000337620 MAP1LC3CQ9BXW4 147 aa10.36□□□□□ -0.75
CBX3-201ENST00000337620 A0A0J9YWU9 116 aa10.36□□□□□ -0.75
CBX3-201ENST00000337620 TEX48A0A1B0GUV7 120 aa10.36□□□□□ -0.75
CBX3-201ENST00000337620 ATP5G1P05496 136 aa10.36□□□□□ -0.75
CBX3-201ENST00000337620 C11orf68Q9H3H3 251 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 166.4 ms