RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 SPANXB1Q9NS25 103 aaPredicted RBP14.47□□□□□ -0.09
NPLOC4-201ENST00000331134 LINC01619G3V211 115 aa14.47□□□□□ -0.09
NPLOC4-201ENST00000331134 NOP10Q9NPE3 64 aaKnown RBP14.47□□□□□ -0.09
NPLOC4-201ENST00000331134 TRAV13-2A0A0B4J235 113 aa14.46□□□□□ -0.09
NPLOC4-201ENST00000331134 IGHV4-61A0A0C4DH41 118 aa14.46□□□□□ -0.09
NPLOC4-201ENST00000331134 GAS8-AS1O95177 125 aa14.46□□□□□ -0.09
NPLOC4-201ENST00000331134 C9orf47Q6ZRZ4 202 aa14.46□□□□□ -0.09
NPLOC4-201ENST00000331134 Q6ZUT4 128 aa14.46□□□□□ -0.09
NPLOC4-201ENST00000331134 SPANXA1Q9NS26 97 aa14.46□□□□□ -0.09
NPLOC4-201ENST00000331134 MRPL23Q16540 153 aaKnown RBP14.46□□□□□ -0.09
NPLOC4-201ENST00000331134 Q8N976 141 aa14.46□□□□□ -0.09
NPLOC4-201ENST00000331134 DEFB112Q30KQ8 113 aa14.46□□□□□ -0.1
NPLOC4-201ENST00000331134 IGLC6P0CF74 106 aa14.45□□□□□ -0.1
NPLOC4-201ENST00000331134 DSCR9P59020 149 aa14.45□□□□□ -0.1
NPLOC4-201ENST00000331134 TRAV25A0A0B4J276 109 aa14.44□□□□□ -0.1
NPLOC4-201ENST00000331134 PIP4P1Q86T03 277 aa14.44□□□□□ -0.1
NPLOC4-201ENST00000331134 F5H768 121 aa14.44□□□□□ -0.1
NPLOC4-201ENST00000331134 DSCAMO60469 2012 aa14.43□□□□□ -0.1
NPLOC4-201ENST00000331134 INSL3P51460 131 aa14.43□□□□□ -0.1
NPLOC4-201ENST00000331134 SLURP1P55000 103 aa14.43□□□□□ -0.1
NPLOC4-201ENST00000331134 TRBV6-1A0A0K0K1D8 114 aa14.42□□□□□ -0.1
NPLOC4-201ENST00000331134 TM2D2Q9BX73 214 aa14.42□□□□□ -0.1
NPLOC4-201ENST00000331134 TEX49A0A1B0GTD5 131 aa14.42□□□□□ -0.1
NPLOC4-201ENST00000331134 LRRK2Q5S007 2527 aa14.42□□□□□ -0.1
NPLOC4-201ENST00000331134 NUP210LQ5VU65 1888 aa14.42□□□□□ -0.1
NPLOC4-201ENST00000331134 ANGP03950 147 aaKnown RBP14.42□□□□□ -0.1
NPLOC4-201ENST00000331134 P0DMU3 169 aa14.42□□□□□ -0.1
NPLOC4-201ENST00000331134 FAM231AP0DMU4 169 aa14.42□□□□□ -0.1
NPLOC4-201ENST00000331134 FAM231CP0DMU5 169 aa14.42□□□□□ -0.1
NPLOC4-201ENST00000331134 SND1-IT1Q9HBX3 110 aa14.42□□□□□ -0.1
NPLOC4-201ENST00000331134 IGHV3-30-3P0DP02 117 aa14.41□□□□□ -0.1
NPLOC4-201ENST00000331134 MYCNOSP40205 109 aa14.41□□□□□ -0.1
NPLOC4-201ENST00000331134 TIMM17AQ99595 171 aa14.41□□□□□ -0.1
NPLOC4-201ENST00000331134 AGRNO00468 2067 aa14.41□□□□□ -0.1
NPLOC4-201ENST00000331134 C5orf56Q8N8D9 126 aa14.4□□□□□ -0.1
NPLOC4-201ENST00000331134 URB1-AS1Q96HZ7 61 aa14.4□□□□□ -0.1
NPLOC4-201ENST00000331134 TNRC6BQ9UPQ9 1833 aaKnown RBP14.4□□□□□ -0.1
NPLOC4-201ENST00000331134 TRBV10-2A0A0K0K1G8 114 aa14.4□□□□□ -0.1
NPLOC4-201ENST00000331134 IGLV2-11P01706 119 aa14.4□□□□□ -0.1
NPLOC4-201ENST00000331134 A0A1B0GX51 115 aa14.4□□□□□ -0.1
NPLOC4-201ENST00000331134 LGALS9O00182 355 aa14.4□□□□□ -0.1
NPLOC4-201ENST00000331134 IGLV10-54A0A075B6I4 117 aa14.39□□□□□ -0.11
NPLOC4-201ENST00000331134 TRAV4A0A0B4J268 109 aa14.39□□□□□ -0.11
NPLOC4-201ENST00000331134 SLC25A29Q8N8R3 303 aa14.39□□□□□ -0.11
NPLOC4-201ENST00000331134 CMC4P56277 68 aaPredicted RBP14.39□□□□□ -0.11
NPLOC4-201ENST00000331134 C20orf203Q8NBC4 194 aa14.39□□□□□ -0.11
NPLOC4-201ENST00000331134 A0A0J9YY99 117 aa14.38□□□□□ -0.11
NPLOC4-201ENST00000331134 SRSF2Q01130 221 aaKnown RBP14.38□□□□□ -0.11
NPLOC4-201ENST00000331134 CCDC140Q96MF4 163 aa14.38□□□□□ -0.11
NPLOC4-201ENST00000331134 Q9HAA7 133 aa14.38□□□□□ -0.11
NPLOC4-201ENST00000331134 POLQO75417 2590 aa14.38□□□□□ -0.11
NPLOC4-201ENST00000331134 Q71RC1 249 aaPredicted RBP14.38□□□□□ -0.11
NPLOC4-201ENST00000331134 LINC00574Q9H8X3 128 aa14.38□□□□□ -0.11
NPLOC4-201ENST00000331134 IGHV4-4A0A075B6R2 117 aa14.38□□□□□ -0.11
NPLOC4-201ENST00000331134 Q6ZQT7 251 aa14.38□□□□□ -0.11
NPLOC4-201ENST00000331134 UNC80Q8N2C7 3258 aa14.37□□□□□ -0.11
NPLOC4-201ENST00000331134 NRGNQ92686 78 aa14.37□□□□□ -0.11
NPLOC4-201ENST00000331134 ESM1Q9NQ30 184 aa14.37□□□□□ -0.11
NPLOC4-201ENST00000331134 RNF185Q96GF1 192 aa14.36□□□□□ -0.11
NPLOC4-201ENST00000331134 ELANEP08246 267 aa14.36□□□□□ -0.11
NPLOC4-201ENST00000331134 IGHV4-30-2A0A087WSY4 118 aa14.35□□□□□ -0.11
NPLOC4-201ENST00000331134 ZNF561-AS1K7EIQ3 104 aa14.35□□□□□ -0.11
NPLOC4-201ENST00000331134 RBM3P98179 157 aaKnown RBP14.35□□□□□ -0.11
NPLOC4-201ENST00000331134 LECT2O14960 151 aa14.35□□□□□ -0.11
NPLOC4-201ENST00000331134 DSCR8Q96T75 97 aa14.34□□□□□ -0.11
NPLOC4-201ENST00000331134 HIST2H2BCQ6DN03 193 aa14.34□□□□□ -0.11
NPLOC4-201ENST00000331134 GATA3P23771 443 aa14.34□□□□□ -0.11
NPLOC4-201ENST00000331134 DAD1P61803 113 aa14.34□□□□□ -0.11
NPLOC4-201ENST00000331134 RBMY1FQ15415 496 aaKnown RBP14.34□□□□□ -0.11
NPLOC4-201ENST00000331134 NEXN-AS1Q8NBZ9 246 aa14.33□□□□□ -0.11
NPLOC4-201ENST00000331134 VSIG2Q96IQ7 327 aa14.33□□□□□ -0.12
NPLOC4-201ENST00000331134 ORMDL1Q9P0S3 153 aa14.33□□□□□ -0.12
NPLOC4-201ENST00000331134 H3BUA1 57 aa14.32□□□□□ -0.12
NPLOC4-201ENST00000331134 ATP6V0E2Q8NHE4 81 aa14.32□□□□□ -0.12
NPLOC4-201ENST00000331134 ATG2AQ2TAZ0 1938 aa14.32□□□□□ -0.12
NPLOC4-201ENST00000331134 CHD7Q9P2D1 2997 aa14.32□□□□□ -0.12
NPLOC4-201ENST00000331134 IGHV4OR15-8A0A075B7B6 117 aa14.32□□□□□ -0.12
NPLOC4-201ENST00000331134 A0A087WW49 117 aa14.32□□□□□ -0.12
NPLOC4-201ENST00000331134 A0A0J9YXY3 114 aa14.32□□□□□ -0.12
NPLOC4-201ENST00000331134 MRAPQ8TCY5 172 aa14.32□□□□□ -0.12
NPLOC4-201ENST00000331134 SMAD5-AS1Q9Y6J3 95 aa14.32□□□□□ -0.12
NPLOC4-201ENST00000331134 NDUFV3P56181 108 aaKnown RBP14.31□□□□□ -0.12
NPLOC4-201ENST00000331134 PIFOQ8TCI5 191 aa14.31□□□□□ -0.12
NPLOC4-201ENST00000331134 PRRC2AP48634 2157 aaKnown RBP14.31□□□□□ -0.12
NPLOC4-201ENST00000331134 IGHV1-58A0A0C4DH39 117 aa14.31□□□□□ -0.12
NPLOC4-201ENST00000331134 H3BT86 120 aa14.31□□□□□ -0.12
NPLOC4-201ENST00000331134 ACYP1P07311 99 aa14.31□□□□□ -0.12
NPLOC4-201ENST00000331134 Q96MF0 132 aa14.31□□□□□ -0.12
NPLOC4-201ENST00000331134 CITED2Q99967 270 aaPredicted RBP14.31□□□□□ -0.12
NPLOC4-201ENST00000331134 C11orf21Q9P2W6 132 aa14.31□□□□□ -0.12
NPLOC4-201ENST00000331134 A0A0B4J2C4 111 aa14.31□□□□□ -0.12
NPLOC4-201ENST00000331134 HERV-K104P63124 156 aa14.31□□□□□ -0.12
NPLOC4-201ENST00000331134 MIR7-3HGQ8N6C7 128 aa14.31□□□□□ -0.12
NPLOC4-201ENST00000331134 ATP5G1P05496 136 aa14.3□□□□□ -0.12
NPLOC4-201ENST00000331134 PRB2P02812 416 aaPredicted RBP14.3□□□□□ -0.12
NPLOC4-201ENST00000331134 SP5Q6BEB4 398 aaPredicted RBP14.3□□□□□ -0.12
NPLOC4-201ENST00000331134 NFE4Q86UQ8 179 aa14.29□□□□□ -0.12
NPLOC4-201ENST00000331134 A8MZ25 164 aa14.29□□□□□ -0.12
NPLOC4-201ENST00000331134 C20orf173Q96LM9 149 aa14.29□□□□□ -0.12
NPLOC4-201ENST00000331134 CLUHP3Q96NS8 147 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms