RNA–Protein interactions for RNA: ENST00000323441.10

HIF1A-201, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,555 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-201ENST00000323441 IL18Q14116 193 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 CNPY1Q3B7I2 92 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 KHDC3LQ587J8 217 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 KRTAP7-1Q8IUC3 87 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.62□□□□□ -2.15
HIF1A-201ENST00000323441 OR5C1Q8NGR4 320 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 NDFIP1Q9BT67 221 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 C11orf21Q9P2W6 132 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 TMEM262E9PQX1 116 aa1.61□□□□□ -2.15
HIF1A-201ENST00000323441 MBPP02686 304 aaPredicted RBP1.61□□□□□ -2.15
HIF1A-201ENST00000323441 RAB4BP61018 213 aa1.61□□□□□ -2.15
HIF1A-201ENST00000323441 BAXQ07812 192 aa1.61□□□□□ -2.15
HIF1A-201ENST00000323441 FAM229BQ4G0N7 80 aa1.61□□□□□ -2.15
HIF1A-201ENST00000323441 SPANXN2Q5MJ10 180 aa1.61□□□□□ -2.15
HIF1A-201ENST00000323441 MIR17HGQ75NE6 70 aa1.61□□□□□ -2.15
HIF1A-201ENST00000323441 OR2T35Q8NGX2 323 aa1.61□□□□□ -2.15
HIF1A-201ENST00000323441 DIRAS2Q96HU8 199 aa1.61□□□□□ -2.15
HIF1A-201ENST00000323441 KRTAP2-2Q9BYT5 123 aa1.61□□□□□ -2.15
HIF1A-201ENST00000323441 KRTAP2-1Q9BYU5 128 aa1.61□□□□□ -2.15
HIF1A-201ENST00000323441 IGKV2-24A0A0C4DH68 120 aa1.61□□□□□ -2.15
HIF1A-201ENST00000323441 FGF7P21781 194 aa1.61□□□□□ -2.15
HIF1A-201ENST00000323441 TAS2R45P59539 299 aa1.61□□□□□ -2.15
HIF1A-201ENST00000323441 RANP62826 216 aaKnown RBP1.61□□□□□ -2.15
HIF1A-201ENST00000323441 RBX1P62877 108 aa1.61□□□□□ -2.15
HIF1A-201ENST00000323441 REG3AQ06141 175 aa1.61□□□□□ -2.15
HIF1A-201ENST00000323441 IQCJQ1A5X6 159 aa1.61□□□□□ -2.15
HIF1A-201ENST00000323441 IAH1Q2TAA2 248 aaPredicted RBP1.61□□□□□ -2.15
HIF1A-201ENST00000323441 NTM-AS1Q6ZSK4 140 aa1.61□□□□□ -2.15
HIF1A-201ENST00000323441 COX8CQ7Z4L0 72 aa1.61□□□□□ -2.15
HIF1A-201ENST00000323441 LINC00269Q8N2A0 174 aa1.61□□□□□ -2.15
HIF1A-201ENST00000323441 CMTM2Q8TAZ6 248 aa1.61□□□□□ -2.15
HIF1A-201ENST00000323441 RBM38Q9H0Z9 239 aaKnown RBP1.61□□□□□ -2.15
HIF1A-201ENST00000323441 UBE2L5PA0A1B0GUS4 154 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 L7N2F9 121 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 PTTG1O95997 202 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 PVALBP20472 110 aaPredicted RBP1.6□□□□□ -2.15
HIF1A-201ENST00000323441 ZNF80P51504 273 aaPredicted RBP1.6□□□□□ -2.15
HIF1A-201ENST00000323441 VAMP2P63027 116 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 LGALSLQ3ZCW2 172 aaPredicted RBP1.6□□□□□ -2.15
HIF1A-201ENST00000323441 SMUG1Q53HV7 270 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 SAPCD1Q5SSQ6 148 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 STX12Q86Y82 276 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 C20orf203Q8NBC4 194 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 MCFD2Q8NI22 146 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 GSKIPQ9P0R6 139 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 IGKV3D-20A0A0C4DH25 116 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 NAP1L6A6NFF2 107 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 F5H697 171 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 F6UZH7 168 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 ZNF561-AS1K7EIQ3 104 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 K7EQM0 130 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 CTDSP2O14595 271 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 RGS5O15539 181 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 OR7C2O60412 319 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 GCGP01275 180 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 MT1FP04733 61 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 UBE2L3P68036 154 aaKnown RBP1.6□□□□□ -2.15
HIF1A-201ENST00000323441 ZFP69Q49AA0 526 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 GCSAMLQ5JQS6 135 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 PQLC2Q6ZP29 291 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 GOLT1AQ6ZVE7 132 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 TOMM5Q8N4H5 51 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 TMEM252Q8N6L7 170 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 NEXN-AS1Q8NBZ9 246 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 OR11H4Q8NGC9 324 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 BCL7BQ9BQE9 202 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 NMES1Q9C002 83 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 TRBV25-1A0A075B6N4 114 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 A0A087WWL8 130 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 TRAV34A0A0B4J273 112 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 C17orf112F2Z3M2 114 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 NDUFB6O95139 128 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 IL15RAQ13261 267 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 RNF151Q2KHN1 245 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 PHF5AQ7RTV0 110 aaKnown RBP1.6□□□□□ -2.15
HIF1A-201ENST00000323441 CHCHD5Q9BSY4 110 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 MBD2Q9UBB5 411 aa1.6□□□□□ -2.15
HIF1A-201ENST00000323441 TRBV6-1A0A0K0K1D8 114 aa1.59□□□□□ -2.15
HIF1A-201ENST00000323441 FABP5P3A8MUU1 101 aa1.59□□□□□ -2.15
HIF1A-201ENST00000323441 ZNF861PO60384 105 aa1.59□□□□□ -2.15
HIF1A-201ENST00000323441 CST7O76096 145 aa1.59□□□□□ -2.15
HIF1A-201ENST00000323441 SCGB1D2O95969 90 aa1.59□□□□□ -2.15
HIF1A-201ENST00000323441 S100A4P26447 101 aaKnown RBP1.59□□□□□ -2.15
HIF1A-201ENST00000323441 BCAP31P51572 246 aa1.59□□□□□ -2.15
HIF1A-201ENST00000323441 RAB2AP61019 212 aa1.59□□□□□ -2.15
HIF1A-201ENST00000323441 CYCSP99999 105 aaKnown RBP1.59□□□□□ -2.15
HIF1A-201ENST00000323441 ZFP82Q8N141 532 aa1.59□□□□□ -2.15
HIF1A-201ENST00000323441 LINC00304Q8N9R0 145 aa1.59□□□□□ -2.15
HIF1A-201ENST00000323441 C5orf17Q8NAS9 161 aa1.59□□□□□ -2.15
HIF1A-201ENST00000323441 TYMSOSQ8TAI1 123 aa1.59□□□□□ -2.15
HIF1A-201ENST00000323441 JPT2Q9H910 190 aa1.59□□□□□ -2.15
HIF1A-201ENST00000323441 IGHV1-24A0A0C4DH33 117 aa1.59□□□□□ -2.15
HIF1A-201ENST00000323441 IGSF23A1L1A6 192 aa1.59□□□□□ -2.15
HIF1A-201ENST00000323441 KRBOX1C9JBD0 128 aa1.59□□□□□ -2.15
HIF1A-201ENST00000323441 TCRAP04437 139 aa1.59□□□□□ -2.15
HIF1A-201ENST00000323441 CXCL1P09341 107 aa1.59□□□□□ -2.15
HIF1A-201ENST00000323441 FLI1Q01543 452 aaPredicted RBP1.59□□□□□ -2.15
HIF1A-201ENST00000323441 PGLYRP4Q96LB8 373 aa1.59□□□□□ -2.15
HIF1A-201ENST00000323441 WDR61Q9GZS3 305 aaKnown RBP1.59□□□□□ -2.15
HIF1A-201ENST00000323441 PSG8Q9UQ74 426 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms