RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 FAM231CP0DMU5 169 aa19.33■□□□□ 0.68
CTDNEP1-201ENST00000318988 HIST1H2BKO60814 126 aa19.32■□□□□ 0.68
CTDNEP1-201ENST00000318988 HIST1H2BJP06899 126 aa19.32■□□□□ 0.68
CTDNEP1-201ENST00000318988 HIST1H2BOP23527 126 aa19.32■□□□□ 0.68
CTDNEP1-201ENST00000318988 HIST1H2BBP33778 126 aa19.32■□□□□ 0.68
CTDNEP1-201ENST00000318988 HIST1H2BDP58876 126 aa19.32■□□□□ 0.68
CTDNEP1-201ENST00000318988 HIST1H2BCP62807 126 aa19.32■□□□□ 0.68
CTDNEP1-201ENST00000318988 HIST2H2BEQ16778 126 aa19.32■□□□□ 0.68
CTDNEP1-201ENST00000318988 HIST2H2BFQ5QNW6 126 aaPredicted RBP19.32■□□□□ 0.68
CTDNEP1-201ENST00000318988 HIST1H2BHQ93079 126 aa19.32■□□□□ 0.68
CTDNEP1-201ENST00000318988 DNAJC30Q96LL9 226 aa19.32■□□□□ 0.68
CTDNEP1-201ENST00000318988 HIST1H2BNQ99877 126 aa19.32■□□□□ 0.68
CTDNEP1-201ENST00000318988 HIST1H2BMQ99879 126 aa19.32■□□□□ 0.68
CTDNEP1-201ENST00000318988 PAX4O43316 350 aa19.31■□□□□ 0.68
CTDNEP1-201ENST00000318988 CRYBA4P53673 196 aa19.31■□□□□ 0.68
CTDNEP1-201ENST00000318988 C20orf78Q9BR46 151 aa19.31■□□□□ 0.68
CTDNEP1-201ENST00000318988 RPL36AP83881 106 aaKnown RBP19.3■□□□□ 0.68
CTDNEP1-201ENST00000318988 RPL36ALQ969Q0 106 aaKnown RBP19.3■□□□□ 0.68
CTDNEP1-201ENST00000318988 LOC389332A0A1B0GUA5 103 aa19.3■□□□□ 0.68
CTDNEP1-201ENST00000318988 SUMO2P61956 95 aaKnown RBP19.3■□□□□ 0.68
CTDNEP1-201ENST00000318988 NEXN-AS1Q8NBZ9 246 aa19.3■□□□□ 0.68
CTDNEP1-201ENST00000318988 C18orf32Q8TCD1 76 aa19.3■□□□□ 0.68
CTDNEP1-201ENST00000318988 DEFB131BA0A096LNP1 70 aa19.29■□□□□ 0.68
CTDNEP1-201ENST00000318988 TRBV6-5A0A0K0K1A5 114 aa19.29■□□□□ 0.68
CTDNEP1-201ENST00000318988 BAGE3Q86Y29 109 aa19.29■□□□□ 0.68
CTDNEP1-201ENST00000318988 PRKDCP78527 4128 aaKnown RBP19.28■□□□□ 0.68
CTDNEP1-201ENST00000318988 TRAV10A0A0B4J240 114 aa19.28■□□□□ 0.68
CTDNEP1-201ENST00000318988 PRSS3P2Q8NHM4 247 aa19.28■□□□□ 0.68
CTDNEP1-201ENST00000318988 TRAV26-1A0A087WT03 109 aa19.27■□□□□ 0.68
CTDNEP1-201ENST00000318988 A0A0J9YY99 117 aa19.27■□□□□ 0.68
CTDNEP1-201ENST00000318988 IQCJQ1A5X6 159 aa19.27■□□□□ 0.68
CTDNEP1-201ENST00000318988 ZNRF2Q8NHG8 242 aa19.27■□□□□ 0.68
CTDNEP1-201ENST00000318988 TMA7Q9Y2S6 64 aaKnown RBP19.27■□□□□ 0.68
CTDNEP1-201ENST00000318988 TRBV7-3A0A075B6L6 115 aa19.26■□□□□ 0.67
CTDNEP1-201ENST00000318988 GAGE12JA6NER3 117 aa19.26■□□□□ 0.67
CTDNEP1-201ENST00000318988 PMCHP20382 165 aa19.26■□□□□ 0.67
CTDNEP1-201ENST00000318988 Q0VG73 95 aa19.26■□□□□ 0.67
CTDNEP1-201ENST00000318988 GAGE1Q13065 139 aa19.26■□□□□ 0.67
CTDNEP1-201ENST00000318988 GAGE4Q13068 117 aa19.26■□□□□ 0.67
CTDNEP1-201ENST00000318988 GAGE5Q13069 117 aa19.26■□□□□ 0.67
CTDNEP1-201ENST00000318988 GAGE13Q4V321 117 aa19.26■□□□□ 0.67
CTDNEP1-201ENST00000318988 SDHAF1A6NFY7 115 aa19.25■□□□□ 0.67
CTDNEP1-201ENST00000318988 GYPEP15421 78 aa19.25■□□□□ 0.67
CTDNEP1-201ENST00000318988 Q9UF83 564 aa19.25■□□□□ 0.67
CTDNEP1-201ENST00000318988 NXT2Q9NPJ8 142 aaKnown RBP19.25■□□□□ 0.67
CTDNEP1-201ENST00000318988 LOC100131303A0A0U1RQF7 123 aa19.24■□□□□ 0.67
CTDNEP1-201ENST00000318988 TMEM70Q9BUB7 260 aa19.24■□□□□ 0.67
CTDNEP1-201ENST00000318988 SMIM2Q9BVW6 85 aa19.24■□□□□ 0.67
CTDNEP1-201ENST00000318988 PRSS47A8MTI9 375 aa19.23■□□□□ 0.67
CTDNEP1-201ENST00000318988 VCYO14598 125 aa19.23■□□□□ 0.67
CTDNEP1-201ENST00000318988 NDUFA6P56556 154 aa19.23■□□□□ 0.67
CTDNEP1-201ENST00000318988 FA2HQ7L5A8 372 aa19.23■□□□□ 0.67
CTDNEP1-201ENST00000318988 S100A6P06703 90 aa19.22■□□□□ 0.67
CTDNEP1-201ENST00000318988 IFI27P40305 119 aaPredicted RBP19.22■□□□□ 0.67
CTDNEP1-201ENST00000318988 RPL32P62910 135 aaKnown RBP19.22■□□□□ 0.67
CTDNEP1-201ENST00000318988 VSIG2Q96IQ7 327 aa19.22■□□□□ 0.67
CTDNEP1-201ENST00000318988 COL7A1Q02388 2944 aa19.21■□□□□ 0.67
CTDNEP1-201ENST00000318988 POLR2KP53803 58 aaKnown RBP19.21■□□□□ 0.67
CTDNEP1-201ENST00000318988 Q8N8P6 123 aa19.21■□□□□ 0.67
CTDNEP1-201ENST00000318988 RNASEKQ6P5S7 137 aaKnown RBP19.2■□□□□ 0.66
CTDNEP1-201ENST00000318988 NIT1Q86X76 327 aa19.2■□□□□ 0.66
CTDNEP1-201ENST00000318988 PHLDA1Q8WV24 401 aaPredicted RBP19.2■□□□□ 0.66
CTDNEP1-201ENST00000318988 KIR2DL4Q99706 377 aa19.2■□□□□ 0.66
CTDNEP1-201ENST00000318988 TRBV27A0A0K0K1C4 114 aa19.19■□□□□ 0.66
CTDNEP1-201ENST00000318988 I3L3M4 83 aa19.19■□□□□ 0.66
CTDNEP1-201ENST00000318988 LINC00614P0C842 121 aa19.19■□□□□ 0.66
CTDNEP1-201ENST00000318988 UBE2D3P61077 147 aa19.19■□□□□ 0.66
CTDNEP1-201ENST00000318988 UBE2D2P62837 147 aa19.19■□□□□ 0.66
CTDNEP1-201ENST00000318988 NEGR1Q7Z3B1 354 aa19.19■□□□□ 0.66
CTDNEP1-201ENST00000318988 DAZ4Q86SG3 579 aaKnown RBP19.19■□□□□ 0.66
CTDNEP1-201ENST00000318988 DAZ3Q9NR90 486 aaKnown RBP19.19■□□□□ 0.66
CTDNEP1-201ENST00000318988 ICOSQ9Y6W8 199 aa19.19■□□□□ 0.66
CTDNEP1-201ENST00000318988 H3BNG1 76 aa19.18■□□□□ 0.66
CTDNEP1-201ENST00000318988 MRPL23Q16540 153 aaKnown RBP19.18■□□□□ 0.66
CTDNEP1-201ENST00000318988 FCER1GP30273 86 aa19.16■□□□□ 0.66
CTDNEP1-201ENST00000318988 AP5S1Q9NUS5 200 aa19.16■□□□□ 0.66
CTDNEP1-201ENST00000318988 FBN3Q75N90 2809 aa19.16■□□□□ 0.66
CTDNEP1-201ENST00000318988 IGHV3-38A0A0C4DH36 116 aa19.15■□□□□ 0.66
CTDNEP1-201ENST00000318988 TCAPO15273 167 aa19.15■□□□□ 0.66
CTDNEP1-201ENST00000318988 SERF1AO75920 110 aa19.15■□□□□ 0.66
CTDNEP1-201ENST00000318988 SH2D6Q7Z4S9 175 aa19.15■□□□□ 0.66
CTDNEP1-201ENST00000318988 CHCHD1Q96BP2 118 aaKnown RBP19.15■□□□□ 0.66
CTDNEP1-201ENST00000318988 IGLV2-18A0A075B6J9 118 aa19.15■□□□□ 0.66
CTDNEP1-201ENST00000318988 COTL1Q14019 142 aa19.15■□□□□ 0.66
CTDNEP1-201ENST00000318988 ATP6V0E2Q8NHE4 81 aa19.15■□□□□ 0.66
CTDNEP1-201ENST00000318988 K7EMI3 77 aa19.13■□□□□ 0.65
CTDNEP1-201ENST00000318988 NUDT3O95989 172 aa19.13■□□□□ 0.65
CTDNEP1-201ENST00000318988 LINC00694P0DN24 101 aa19.13■□□□□ 0.65
CTDNEP1-201ENST00000318988 COA6Q5JTJ3 125 aaKnown RBP19.13■□□□□ 0.65
CTDNEP1-201ENST00000318988 DEFB104AQ8WTQ1 72 aa19.13■□□□□ 0.65
CTDNEP1-201ENST00000318988 STAB2Q8WWQ8 2551 aa19.12■□□□□ 0.65
CTDNEP1-201ENST00000318988 HSBP1O75506 76 aa19.12■□□□□ 0.65
CTDNEP1-201ENST00000318988 A0A096LPF7 62 aa19.11■□□□□ 0.65
CTDNEP1-201ENST00000318988 LAGE3Q14657 143 aa19.11■□□□□ 0.65
CTDNEP1-201ENST00000318988 URB1-AS1Q96HZ7 61 aa19.11■□□□□ 0.65
CTDNEP1-201ENST00000318988 ORMDL2Q53FV1 153 aa19.1■□□□□ 0.65
CTDNEP1-201ENST00000318988 IGLL5B9A064 214 aa19.1■□□□□ 0.65
CTDNEP1-201ENST00000318988 TMEM97Q5BJF2 176 aa19.1■□□□□ 0.65
CTDNEP1-201ENST00000318988 C15orf53Q8NAA6 179 aa19.1■□□□□ 0.65
CTDNEP1-201ENST00000318988 TSHBP01222 138 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms