RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.23□□□□□ -1.259e-12■■■■■ 45
PTPRA-202ENST00000318266 CENPVL3A0A0U1RRI6 287 aa7.23□□□□□ -1.25
PTPRA-202ENST00000318266 VCYO14598 125 aa7.23□□□□□ -1.25
PTPRA-202ENST00000318266 LINC00315P59091 139 aa7.23□□□□□ -1.25
PTPRA-202ENST00000318266 HERV-K104P63124 156 aa7.23□□□□□ -1.25
PTPRA-202ENST00000318266 ZNF876PQ49A33 203 aa7.23□□□□□ -1.25
PTPRA-202ENST00000318266 SPXQ9BT56 116 aa7.23□□□□□ -1.25
PTPRA-202ENST00000318266 CUBNO60494 3623 aa7.23□□□□□ -1.25
PTPRA-202ENST00000318266 TRBV7-1A0A0A6YYK4 115 aa7.22□□□□□ -1.25
PTPRA-202ENST00000318266 TRIAP1O43715 76 aa7.22□□□□□ -1.25
PTPRA-202ENST00000318266 POLR2KP53803 58 aaKnown RBP7.22□□□□□ -1.25
PTPRA-202ENST00000318266 EBI3Q14213 229 aa7.22□□□□□ -1.25
PTPRA-202ENST00000318266 IGHV1-69DA0A0B4J2H0 117 aa7.22□□□□□ -1.25
PTPRA-202ENST00000318266 PPP1R17O96001 155 aa7.22□□□□□ -1.25
PTPRA-202ENST00000318266 CDSNQ15517 529 aa7.22□□□□□ -1.25
PTPRA-202ENST00000318266 ATXN8Q156A1 80 aa7.22□□□□□ -1.25
PTPRA-202ENST00000318266 ODF3Q96PU9 254 aa7.22□□□□□ -1.25
PTPRA-202ENST00000318266 EDN2P20800 178 aa7.22□□□□□ -1.25
PTPRA-202ENST00000318266 C2orf82Q6UX34 121 aa7.22□□□□□ -1.25
PTPRA-202ENST00000318266 KIF25-AS1Q9Y6Z4 181 aa7.22□□□□□ -1.25
PTPRA-202ENST00000318266 U3KQE9 123 aa7.22□□□□□ -1.25
PTPRA-202ENST00000318266 TRAV12-2A0A075B6T6 113 aa7.21□□□□□ -1.26
PTPRA-202ENST00000318266 TRAV8-3A0A0A6YYJ7 113 aa7.21□□□□□ -1.26
PTPRA-202ENST00000318266 CLEC2BQ92478 149 aa7.21□□□□□ -1.26
PTPRA-202ENST00000318266 TMEM141Q96I45 108 aa7.21□□□□□ -1.26
PTPRA-202ENST00000318266 DUX3Q96PT4 197 aa7.21□□□□□ -1.26
PTPRA-202ENST00000318266 UBTD1Q9HAC8 227 aa7.21□□□□□ -1.26
PTPRA-202ENST00000318266 TRBV7-9A0A0J9YWB2 115 aa7.21□□□□□ -1.26
PTPRA-202ENST00000318266 A8MZ25 164 aa7.21□□□□□ -1.26
PTPRA-202ENST00000318266 H3BMM0 161 aa7.21□□□□□ -1.26
PTPRA-202ENST00000318266 OVOL1O14753 267 aa7.21□□□□□ -1.26
PTPRA-202ENST00000318266 MINOS1Q5TGZ0 78 aa7.21□□□□□ -1.26
PTPRA-202ENST00000318266 UBE2WQ96B02 151 aa7.21□□□□□ -1.26
PTPRA-202ENST00000318266 LENEPQ9Y5L5 61 aa7.21□□□□□ -1.26
PTPRA-202ENST00000318266 MINOS1-NBL1R4GNA1 71 aa7.21□□□□□ -1.26
PTPRA-202ENST00000318266 CCL21O00585 134 aa7.2□□□□□ -1.26
PTPRA-202ENST00000318266 CEMP1Q6PRD7 247 aaPredicted RBP7.2□□□□□ -1.26
PTPRA-202ENST00000318266 TIMM17AQ99595 171 aa7.2□□□□□ -1.26
PTPRA-202ENST00000318266 ZNF462Q96JM2 2506 aa7.2□□□□□ -1.26
PTPRA-202ENST00000318266 ZNF22P17026 224 aaPredicted RBP7.2□□□□□ -1.26
PTPRA-202ENST00000318266 TRAV41A0A0B4J266 112 aa7.2□□□□□ -1.26
PTPRA-202ENST00000318266 TMEM223A0PJW6 202 aa7.2□□□□□ -1.26
PTPRA-202ENST00000318266 RPL32P62910 135 aaKnown RBP7.2□□□□□ -1.26
PTPRA-202ENST00000318266 MDFICQ9P1T7 246 aa7.2□□□□□ -1.26
PTPRA-202ENST00000318266 IGHV3-73A0A0B4J1V6 119 aa7.19□□□□□ -1.26
PTPRA-202ENST00000318266 OOSP1A8MZH6 123 aa7.19□□□□□ -1.26
PTPRA-202ENST00000318266 LEPROTO15243 131 aa7.19□□□□□ -1.26
PTPRA-202ENST00000318266 UBR5O95071 2799 aaPredicted RBP7.19□□□□□ -1.26
PTPRA-202ENST00000318266 HTN1P15515 57 aa7.19□□□□□ -1.26
PTPRA-202ENST00000318266 UBE2E1P51965 193 aa7.19□□□□□ -1.26
PTPRA-202ENST00000318266 CHCHD5Q9BSY4 110 aa7.19□□□□□ -1.26
PTPRA-202ENST00000318266 SPG11Q96JI7 2443 aa7.19□□□□□ -1.26
PTPRA-202ENST00000318266 MAST4O15021 2626 aa7.19□□□□□ -1.26
PTPRA-202ENST00000318266 A0A0J9YXY3 114 aa7.19□□□□□ -1.26
PTPRA-202ENST00000318266 DAND5Q8N907 189 aa7.19□□□□□ -1.26
PTPRA-202ENST00000318266 KLK9Q9UKQ9 250 aa7.19□□□□□ -1.26
PTPRA-202ENST00000318266 DOPEY2Q9Y3R5 2298 aa7.19□□□□□ -1.26
PTPRA-202ENST00000318266 SETXQ7Z333 2677 aaKnown RBP7.19□□□□□ -1.26
PTPRA-202ENST00000318266 IGHV4OR15-8A0A075B7B6 117 aa7.18□□□□□ -1.26
PTPRA-202ENST00000318266 A0A087WW49 117 aa7.18□□□□□ -1.26
PTPRA-202ENST00000318266 A0A0B4J2C4 111 aa7.18□□□□□ -1.26
PTPRA-202ENST00000318266 LY6EQ16553 131 aa7.18□□□□□ -1.26
PTPRA-202ENST00000318266 MEIG1Q5JSS6 88 aa7.18□□□□□ -1.26
PTPRA-202ENST00000318266 RHPN1-AS1Q9BWJ2 59 aa7.18□□□□□ -1.26
PTPRA-202ENST00000318266 SIRPDQ9H106 197 aa7.18□□□□□ -1.26
PTPRA-202ENST00000318266 PRRC2AP48634 2157 aaKnown RBP7.18□□□□□ -1.26
PTPRA-202ENST00000318266 TRBV10-2A0A0K0K1G8 114 aa7.18□□□□□ -1.26
PTPRA-202ENST00000318266 SOCS3O14543 225 aa7.18□□□□□ -1.26
PTPRA-202ENST00000318266 P0DMU3 169 aa7.18□□□□□ -1.26
PTPRA-202ENST00000318266 FAM231AP0DMU4 169 aa7.18□□□□□ -1.26
PTPRA-202ENST00000318266 FAM231CP0DMU5 169 aa7.18□□□□□ -1.26
PTPRA-202ENST00000318266 ADAMTSL4-AS1Q5T5F5 129 aa7.18□□□□□ -1.26
PTPRA-202ENST00000318266 BRD3OSQ6XYD6 125 aa7.18□□□□□ -1.26
PTPRA-202ENST00000318266 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.18□□□□□ -1.26
PTPRA-202ENST00000318266 IGHV3-30-3P0DP02 117 aa7.18□□□□□ -1.26
PTPRA-202ENST00000318266 C5orf56Q8N8D9 126 aa7.18□□□□□ -1.26
PTPRA-202ENST00000318266 VPS13CQ709C8 3753 aa7.17□□□□□ -1.26
PTPRA-202ENST00000318266 TRBV27A0A0K0K1C4 114 aa7.17□□□□□ -1.26
PTPRA-202ENST00000318266 H7C423 109 aa7.17□□□□□ -1.26
PTPRA-202ENST00000318266 M0R2P5 195 aa7.17□□□□□ -1.26
PTPRA-202ENST00000318266 PF4V1P10720 104 aa7.17□□□□□ -1.26
PTPRA-202ENST00000318266 CRYBG3Q68DQ2 2970 aa7.17□□□□□ -1.26
PTPRA-202ENST00000318266 A0A0U1RRA0 63 aa7.17□□□□□ -1.26
PTPRA-202ENST00000318266 LGALS9O00182 355 aa7.17□□□□□ -1.26
PTPRA-202ENST00000318266 TIMM21Q9BVV7 248 aa7.17□□□□□ -1.26
PTPRA-202ENST00000318266 ICOSQ9Y6W8 199 aa7.17□□□□□ -1.26
PTPRA-202ENST00000318266 CSPG4Q6UVK1 2322 aa7.16□□□□□ -1.26
PTPRA-202ENST00000318266 NOTCH3Q9UM47 2321 aa7.16□□□□□ -1.26
PTPRA-202ENST00000318266 MED14OSP0DP75 135 aa7.16□□□□□ -1.26
PTPRA-202ENST00000318266 CD28P10747 220 aa7.16□□□□□ -1.26
PTPRA-202ENST00000318266 FLNBO75369 2602 aaKnown RBP7.16□□□□□ -1.26
PTPRA-202ENST00000318266 C2CD3Q4AC94 2353 aa7.16□□□□□ -1.26
PTPRA-202ENST00000318266 IGLV4-3A0A075B6K6 122 aa7.16□□□□□ -1.26
PTPRA-202ENST00000318266 M0QY20 66 aa7.16□□□□□ -1.26
PTPRA-202ENST00000318266 NPFFO15130 113 aa7.15□□□□□ -1.26
PTPRA-202ENST00000318266 FAM19A4Q96LR4 140 aa7.15□□□□□ -1.26
PTPRA-202ENST00000318266 NACAE9PAV3 2078 aa7.15□□□□□ -1.26
PTPRA-202ENST00000318266 NXPH4O95158 308 aa7.15□□□□□ -1.27
PTPRA-202ENST00000318266 C20orf203Q8NBC4 194 aa7.15□□□□□ -1.27
PTPRA-202ENST00000318266 HIVEP3Q5T1R4 2406 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 194.2 ms