RNA–Protein interactions for RNA: ENST00000312734.8

CGREF1-202, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CGREF1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-202ENST00000312734 GAGE4Q13068 117 aa19.05■□□□□ 0.64
CGREF1-202ENST00000312734 GAGE5Q13069 117 aa19.05■□□□□ 0.64
CGREF1-202ENST00000312734 GAGE13Q4V321 117 aa19.05■□□□□ 0.64
CGREF1-202ENST00000312734 ORMDL3Q8N138 153 aa19.05■□□□□ 0.64
CGREF1-202ENST00000312734 NEXN-AS1Q8NBZ9 246 aa19.05■□□□□ 0.64
CGREF1-202ENST00000312734 IGLL5B9A064 214 aa19.04■□□□□ 0.64
CGREF1-202ENST00000312734 TRGC2P03986 189 aa19.04■□□□□ 0.64
CGREF1-202ENST00000312734 ZNRF2Q8NHG8 242 aa19.04■□□□□ 0.64
CGREF1-202ENST00000312734 NIT2Q9NQR4 276 aa19.04■□□□□ 0.64
CGREF1-202ENST00000312734 OR10J3Q5JRS4 329 aa19.03■□□□□ 0.64
CGREF1-202ENST00000312734 PRELID3AQ96N28 172 aa19.03■□□□□ 0.64
CGREF1-202ENST00000312734 TRBV10-1A0A0K0K1A3 114 aa19.03■□□□□ 0.64
CGREF1-202ENST00000312734 PPBPP02775 128 aa19.03■□□□□ 0.64
CGREF1-202ENST00000312734 CEMP1Q6PRD7 247 aaPredicted RBP19.03■□□□□ 0.64
CGREF1-202ENST00000312734 TNFRSF18Q9Y5U5 241 aa19.03■□□□□ 0.64
CGREF1-202ENST00000312734 ZFAND6Q6FIF0 208 aa19.02■□□□□ 0.64
CGREF1-202ENST00000312734 NRACQ8N912 160 aa19.02■□□□□ 0.64
CGREF1-202ENST00000312734 RPL36AP83881 106 aaKnown RBP19.01■□□□□ 0.63
CGREF1-202ENST00000312734 RPL36ALQ969Q0 106 aaKnown RBP19.01■□□□□ 0.63
CGREF1-202ENST00000312734 TNFRSF6BO95407 300 aa19■□□□□ 0.63
CGREF1-202ENST00000312734 NUDT3O95989 172 aa19■□□□□ 0.63
CGREF1-202ENST00000312734 NPYP01303 97 aa19■□□□□ 0.63
CGREF1-202ENST00000312734 A0A096LPF7 62 aa19■□□□□ 0.63
CGREF1-202ENST00000312734 MUC7Q8TAX7 377 aa19■□□□□ 0.63
CGREF1-202ENST00000312734 TRBV7-3A0A075B6L6 115 aa18.99■□□□□ 0.63
CGREF1-202ENST00000312734 DNAJC30Q96LL9 226 aa18.99■□□□□ 0.63
CGREF1-202ENST00000312734 NUPR2A6NF83 97 aa18.98■□□□□ 0.63
CGREF1-202ENST00000312734 H3BNG1 76 aa18.98■□□□□ 0.63
CGREF1-202ENST00000312734 SRIP30626 198 aa18.98■□□□□ 0.63
CGREF1-202ENST00000312734 ALKBH7Q9BT30 221 aaPredicted RBP18.98■□□□□ 0.63
CGREF1-202ENST00000312734 ST20Q9HBF5 79 aa18.98■□□□□ 0.63
CGREF1-202ENST00000312734 ICOSQ9Y6W8 199 aa18.98■□□□□ 0.63
CGREF1-202ENST00000312734 PPP1R17O96001 155 aa18.97■□□□□ 0.63
CGREF1-202ENST00000312734 MRPL23Q16540 153 aaKnown RBP18.96■□□□□ 0.63
CGREF1-202ENST00000312734 DNAH7Q8WXX0 4024 aa18.96■□□□□ 0.63
CGREF1-202ENST00000312734 IGHV3-38A0A0C4DH36 116 aa18.96■□□□□ 0.63
CGREF1-202ENST00000312734 DEFB104AQ8WTQ1 72 aa18.96■□□□□ 0.63
CGREF1-202ENST00000312734 KLK5Q9Y337 293 aaPredicted RBP18.96■□□□□ 0.63
CGREF1-202ENST00000312734 TRBV6-5A0A0K0K1A5 114 aa18.95■□□□□ 0.62
CGREF1-202ENST00000312734 LOC389332A0A1B0GUA5 103 aa18.95■□□□□ 0.62
CGREF1-202ENST00000312734 UBE2D3P61077 147 aa18.95■□□□□ 0.62
CGREF1-202ENST00000312734 UBE2D2P62837 147 aa18.95■□□□□ 0.62
CGREF1-202ENST00000312734 SDHAF1A6NFY7 115 aa18.94■□□□□ 0.62
CGREF1-202ENST00000312734 SUMO2P61956 95 aaKnown RBP18.94■□□□□ 0.62
CGREF1-202ENST00000312734 NEGR1Q7Z3B1 354 aa18.94■□□□□ 0.62
CGREF1-202ENST00000312734 PHOX2AO14813 284 aa18.93■□□□□ 0.62
CGREF1-202ENST00000312734 LAMTOR2Q9Y2Q5 125 aa18.93■□□□□ 0.62
CGREF1-202ENST00000312734 LINC00694P0DN24 101 aa18.92■□□□□ 0.62
CGREF1-202ENST00000312734 C15orf53Q8NAA6 179 aa18.92■□□□□ 0.62
CGREF1-202ENST00000312734 ATP6V0E2Q8NHE4 81 aa18.92■□□□□ 0.62
CGREF1-202ENST00000312734 C20orf78Q9BR46 151 aa18.92■□□□□ 0.62
CGREF1-202ENST00000312734 TMEM70Q9BUB7 260 aa18.92■□□□□ 0.62
CGREF1-202ENST00000312734 MAP1LC3AQ9H492 121 aa18.91■□□□□ 0.62
CGREF1-202ENST00000312734 POLR2KP53803 58 aaKnown RBP18.9■□□□□ 0.62
CGREF1-202ENST00000312734 IQCJQ1A5X6 159 aa18.89■□□□□ 0.62
CGREF1-202ENST00000312734 CSMD3Q7Z407 3707 aa18.89■□□□□ 0.61
CGREF1-202ENST00000312734 PMCHP20382 165 aa18.89■□□□□ 0.61
CGREF1-202ENST00000312734 DAZ4Q86SG3 579 aaKnown RBP18.89■□□□□ 0.61
CGREF1-202ENST00000312734 DAZ3Q9NR90 486 aaKnown RBP18.89■□□□□ 0.61
CGREF1-202ENST00000312734 APLNQ9ULZ1 77 aa18.88■□□□□ 0.61
CGREF1-202ENST00000312734 VCYO14598 125 aa18.87■□□□□ 0.61
CGREF1-202ENST00000312734 SH2D6Q7Z4S9 175 aa18.87■□□□□ 0.61
CGREF1-202ENST00000312734 C18orf32Q8TCD1 76 aa18.87■□□□□ 0.61
CGREF1-202ENST00000312734 SMIM2Q9BVW6 85 aa18.87■□□□□ 0.61
CGREF1-202ENST00000312734 I3L3M4 83 aa18.86■□□□□ 0.61
CGREF1-202ENST00000312734 TRBV27A0A0K0K1C4 114 aa18.85■□□□□ 0.61
CGREF1-202ENST00000312734 PRSS47A8MTI9 375 aa18.85■□□□□ 0.61
CGREF1-202ENST00000312734 IFI27P40305 119 aaPredicted RBP18.85■□□□□ 0.61
CGREF1-202ENST00000312734 LYPD5Q6UWN5 251 aa18.85■□□□□ 0.61
CGREF1-202ENST00000312734 PRSS3P2Q8NHM4 247 aa18.85■□□□□ 0.61
CGREF1-202ENST00000312734 GTSF1LQ9H1H1 148 aa18.85■□□□□ 0.61
CGREF1-202ENST00000312734 C1orf196B1AJZ1 125 aa18.84■□□□□ 0.61
CGREF1-202ENST00000312734 RPL32P62910 135 aaKnown RBP18.83■□□□□ 0.61
CGREF1-202ENST00000312734 ESRGQ1W209 222 aa18.83■□□□□ 0.61
CGREF1-202ENST00000312734 STARD9Q9P2P6 4700 aa18.83■□□□□ 0.61
CGREF1-202ENST00000312734 TCAPO15273 167 aa18.82■□□□□ 0.6
CGREF1-202ENST00000312734 COTL1Q14019 142 aa18.82■□□□□ 0.6
CGREF1-202ENST00000312734 DYNC2H1Q8NCM8 4307 aaKnown RBP18.82■□□□□ 0.6
CGREF1-202ENST00000312734 IGLV2-18A0A075B6J9 118 aa18.82■□□□□ 0.6
CGREF1-202ENST00000312734 C3orf84H3BNL1 204 aa18.82■□□□□ 0.6
CGREF1-202ENST00000312734 CASC10Q5T4H9 136 aa18.82■□□□□ 0.6
CGREF1-202ENST00000312734 NTM-AS1Q6ZSK4 140 aa18.82■□□□□ 0.6
CGREF1-202ENST00000312734 Q8N8P6 123 aa18.82■□□□□ 0.6
CGREF1-202ENST00000312734 KIR2DL4Q99706 377 aa18.82■□□□□ 0.6
CGREF1-202ENST00000312734 HIST1H2BKO60814 126 aa18.81■□□□□ 0.6
CGREF1-202ENST00000312734 HIST1H2BJP06899 126 aa18.81■□□□□ 0.6
CGREF1-202ENST00000312734 HIST1H2BOP23527 126 aa18.81■□□□□ 0.6
CGREF1-202ENST00000312734 HIST1H2BBP33778 126 aa18.81■□□□□ 0.6
CGREF1-202ENST00000312734 HIST1H2BDP58876 126 aa18.81■□□□□ 0.6
CGREF1-202ENST00000312734 HIST1H2BCP62807 126 aa18.81■□□□□ 0.6
CGREF1-202ENST00000312734 HIST2H2BEQ16778 126 aa18.81■□□□□ 0.6
CGREF1-202ENST00000312734 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.81■□□□□ 0.6
CGREF1-202ENST00000312734 HIST1H2BHQ93079 126 aa18.81■□□□□ 0.6
CGREF1-202ENST00000312734 HIST1H2BNQ99877 126 aa18.81■□□□□ 0.6
CGREF1-202ENST00000312734 HIST1H2BMQ99879 126 aa18.81■□□□□ 0.6
CGREF1-202ENST00000312734 NXT2Q9NPJ8 142 aaKnown RBP18.81■□□□□ 0.6
CGREF1-202ENST00000312734 TSHBP01222 138 aa18.8■□□□□ 0.6
CGREF1-202ENST00000312734 FCER1GP30273 86 aa18.8■□□□□ 0.6
CGREF1-202ENST00000312734 TCTAP57738 103 aa18.8■□□□□ 0.6
CGREF1-202ENST00000312734 NIT1Q86X76 327 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms