RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 ELOBQ15370 118 aa17.63■□□□□ 0.41
CDKN2A-201ENST00000304494 LYPD6BQ8NI32 183 aa17.63■□□□□ 0.41
CDKN2A-201ENST00000304494 NTN5Q8WTR8 489 aaPredicted RBP17.63■□□□□ 0.41
CDKN2A-201ENST00000304494 ABCA13Q86UQ4 5058 aa17.63■□□□□ 0.41
CDKN2A-201ENST00000304494 TMEM250H0YL14 139 aa17.62■□□□□ 0.41
CDKN2A-201ENST00000304494 Q8N814 137 aa17.62■□□□□ 0.41
CDKN2A-201ENST00000304494 NUDT10Q8NFP7 164 aa17.62■□□□□ 0.41
CDKN2A-201ENST00000304494 RMI2Q96E14 147 aa17.62■□□□□ 0.41
CDKN2A-201ENST00000304494 NUDT11Q96G61 164 aa17.62■□□□□ 0.41
CDKN2A-201ENST00000304494 COX11Q9Y6N1 276 aa17.62■□□□□ 0.41
CDKN2A-201ENST00000304494 TMEM97Q5BJF2 176 aa17.61■□□□□ 0.41
CDKN2A-201ENST00000304494 IGLV5-52A0A0A0MRZ9 124 aa17.6■□□□□ 0.41
CDKN2A-201ENST00000304494 H7C1H1 209 aa17.6■□□□□ 0.41
CDKN2A-201ENST00000304494 MGPP08493 103 aa17.6■□□□□ 0.41
CDKN2A-201ENST00000304494 TRGC1P0CF51 173 aa17.6■□□□□ 0.41
CDKN2A-201ENST00000304494 GCSHP23434 173 aa17.6■□□□□ 0.41
CDKN2A-201ENST00000304494 LYZL1Q6UWQ5 148 aa17.6■□□□□ 0.41
CDKN2A-201ENST00000304494 Q8N1X5 172 aa17.6■□□□□ 0.41
CDKN2A-201ENST00000304494 NKX2-5P52952 324 aaPredicted RBP17.59■□□□□ 0.41
CDKN2A-201ENST00000304494 OCC1Q8TAD7 63 aa17.59■□□□□ 0.41
CDKN2A-201ENST00000304494 RPP21Q9H633 154 aaKnown RBP17.59■□□□□ 0.41
CDKN2A-201ENST00000304494 KLK12Q9UKR0 248 aa17.59■□□□□ 0.41
CDKN2A-201ENST00000304494 TMEM262E9PQX1 116 aa17.58■□□□□ 0.4
CDKN2A-201ENST00000304494 K7EN84 100 aa17.58■□□□□ 0.4
CDKN2A-201ENST00000304494 PKIAP61925 76 aa17.58■□□□□ 0.4
CDKN2A-201ENST00000304494 WDR73Q6P4I2 378 aa17.58■□□□□ 0.4
CDKN2A-201ENST00000304494 CTRLP40313 264 aa17.57■□□□□ 0.4
CDKN2A-201ENST00000304494 KRTAP10-1P60331 282 aa17.57■□□□□ 0.4
CDKN2A-201ENST00000304494 DNAJC30Q96LL9 226 aa17.57■□□□□ 0.4
CDKN2A-201ENST00000304494 KRTAP4-5Q9BYR2 181 aa17.57■□□□□ 0.4
CDKN2A-201ENST00000304494 RNASE7Q9H1E1 156 aaKnown RBP17.57■□□□□ 0.4
CDKN2A-201ENST00000304494 A0A1B0GVG6 124 aa17.56■□□□□ 0.4
CDKN2A-201ENST00000304494 M0QY20 66 aa17.56■□□□□ 0.4
CDKN2A-201ENST00000304494 NTF3P20783 257 aa17.56■□□□□ 0.4
CDKN2A-201ENST00000304494 SUMO4Q6EEV6 95 aa17.55■□□□□ 0.4
CDKN2A-201ENST00000304494 DPH3P1Q9H4G8 78 aa17.55■□□□□ 0.4
CDKN2A-201ENST00000304494 Q0VG73 95 aa17.54■□□□□ 0.4
CDKN2A-201ENST00000304494 UBE2WQ96B02 151 aa17.54■□□□□ 0.4
CDKN2A-201ENST00000304494 CHCHD5Q9BSY4 110 aa17.54■□□□□ 0.4
CDKN2A-201ENST00000304494 EIF5A2Q9GZV4 153 aaKnown RBP17.54■□□□□ 0.4
CDKN2A-201ENST00000304494 IGKV2D-24A0A075B6R9 120 aa17.53■□□□□ 0.4
CDKN2A-201ENST00000304494 CNFNQ9BYD5 112 aa17.53■□□□□ 0.4
CDKN2A-201ENST00000304494 NDUFS6O75380 124 aaKnown RBP17.52■□□□□ 0.4
CDKN2A-201ENST00000304494 CEBPGP53567 150 aa17.52■□□□□ 0.4
CDKN2A-201ENST00000304494 TWIST1Q15672 202 aa17.52■□□□□ 0.4
CDKN2A-201ENST00000304494 TRBV25-1A0A075B6N4 114 aa17.51■□□□□ 0.39
CDKN2A-201ENST00000304494 MPV17L2Q567V2 206 aa17.51■□□□□ 0.39
CDKN2A-201ENST00000304494 RASL11AQ6T310 242 aa17.51■□□□□ 0.39
CDKN2A-201ENST00000304494 NTM-AS1Q6ZSK4 140 aa17.51■□□□□ 0.39
CDKN2A-201ENST00000304494 CRPP02741 224 aa17.5■□□□□ 0.39
CDKN2A-201ENST00000304494 XGP55808 180 aa17.5■□□□□ 0.39
CDKN2A-201ENST00000304494 WFDC2Q14508 124 aa17.5■□□□□ 0.39
CDKN2A-201ENST00000304494 ATRAIDQ6UW56 229 aa17.5■□□□□ 0.39
CDKN2A-201ENST00000304494 FAM231DQ6ZW35 169 aa17.5■□□□□ 0.39
CDKN2A-201ENST00000304494 FAM210AQ96ND0 272 aa17.5■□□□□ 0.39
CDKN2A-201ENST00000304494 LECT2O14960 151 aa17.49■□□□□ 0.39
CDKN2A-201ENST00000304494 GATCO43716 136 aaKnown RBP17.49■□□□□ 0.39
CDKN2A-201ENST00000304494 C15orf54Q8N8G6 183 aa17.49■□□□□ 0.39
CDKN2A-201ENST00000304494 ANGP03950 147 aaKnown RBP17.48■□□□□ 0.39
CDKN2A-201ENST00000304494 BAALCQ8WXS3 180 aa17.48■□□□□ 0.39
CDKN2A-201ENST00000304494 NIT2Q9NQR4 276 aa17.48■□□□□ 0.39
CDKN2A-201ENST00000304494 IGHV1-24A0A0C4DH33 117 aa17.47■□□□□ 0.39
CDKN2A-201ENST00000304494 A8MWL6 223 aa17.47■□□□□ 0.39
CDKN2A-201ENST00000304494 IQCJQ1A5X6 159 aa17.47■□□□□ 0.39
CDKN2A-201ENST00000304494 GTSF1Q8WW33 167 aa17.47■□□□□ 0.39
CDKN2A-201ENST00000304494 SMIM7Q9BQ49 75 aa17.47■□□□□ 0.39
CDKN2A-201ENST00000304494 TMEM70Q9BUB7 260 aa17.47■□□□□ 0.39
CDKN2A-201ENST00000304494 C1orf43Q9BWL3 253 aa17.47■□□□□ 0.39
CDKN2A-201ENST00000304494 ENHOQ6UWT2 76 aa17.46■□□□□ 0.39
CDKN2A-201ENST00000304494 SMIM15Q7Z3B0 74 aa17.46■□□□□ 0.39
CDKN2A-201ENST00000304494 Q8N976 141 aa17.46■□□□□ 0.39
CDKN2A-201ENST00000304494 CT83Q5H943 113 aa17.45■□□□□ 0.38
CDKN2A-201ENST00000304494 FRZBQ92765 325 aa17.45■□□□□ 0.38
CDKN2A-201ENST00000304494 ZNF727A8MUV8 499 aa17.43■□□□□ 0.38
CDKN2A-201ENST00000304494 GAGE6Q13070 117 aa17.43■□□□□ 0.38
CDKN2A-201ENST00000304494 PGLYRP4Q96LB8 373 aa17.43■□□□□ 0.38
CDKN2A-201ENST00000304494 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.42■□□□□ 0.38
CDKN2A-201ENST00000304494 EPM2AB3EWF7 344 aa17.42■□□□□ 0.38
CDKN2A-201ENST00000304494 RBX1P62877 108 aa17.42■□□□□ 0.38
CDKN2A-201ENST00000304494 MIAQ16674 131 aa17.42■□□□□ 0.38
CDKN2A-201ENST00000304494 LINC01551Q86U37 167 aa17.42■□□□□ 0.38
CDKN2A-201ENST00000304494 SRP19P09132 144 aaKnown RBP17.41■□□□□ 0.38
CDKN2A-201ENST00000304494 BORCS7Q96B45 105 aa17.41■□□□□ 0.38
CDKN2A-201ENST00000304494 FOXA3P55318 350 aaPredicted RBP17.4■□□□□ 0.38
CDKN2A-201ENST00000304494 TMEM243Q9BU79 118 aa17.4■□□□□ 0.38
CDKN2A-201ENST00000304494 PRR34Q9NV39 138 aa17.4■□□□□ 0.38
CDKN2A-201ENST00000304494 GATD1Q8NB37 220 aa17.39■□□□□ 0.37
CDKN2A-201ENST00000304494 COTL1Q14019 142 aa17.38■□□□□ 0.37
CDKN2A-201ENST00000304494 C14orf177Q52M58 125 aa17.38■□□□□ 0.37
CDKN2A-201ENST00000304494 TEX261Q6UWH6 196 aa17.38■□□□□ 0.37
CDKN2A-201ENST00000304494 LINC00269Q8N2A0 174 aa17.38■□□□□ 0.37
CDKN2A-201ENST00000304494 TRAV26-2A0A0B4J265 109 aa17.37■□□□□ 0.37
CDKN2A-201ENST00000304494 TSKUQ8WUA8 353 aa17.37■□□□□ 0.37
CDKN2A-201ENST00000304494 GFRA4Q9GZZ7 299 aa17.37■□□□□ 0.37
CDKN2A-201ENST00000304494 OSTCQ9NRP0 149 aa17.37■□□□□ 0.37
CDKN2A-201ENST00000304494 FAM74A3Q4VXF1 159 aa17.36■□□□□ 0.37
CDKN2A-201ENST00000304494 A0A1B0GUV1 79 aa17.35■□□□□ 0.37
CDKN2A-201ENST00000304494 FAM231BA6NCW3 169 aa17.35■□□□□ 0.37
CDKN2A-201ENST00000304494 UBE2L6O14933 153 aa17.35■□□□□ 0.37
CDKN2A-201ENST00000304494 AMTP48728 403 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms