RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 FAM19A4Q96LR4 140 aa10.07□□□□□ -0.8
CTTN-201ENST00000301843 PIEZO1Q92508 2521 aa10.07□□□□□ -0.8
CTTN-201ENST00000301843 MT-ATP8P03928 68 aa10.07□□□□□ -0.8
CTTN-201ENST00000301843 UBE2D1P51668 147 aa10.07□□□□□ -0.8
CTTN-201ENST00000301843 CCDC168Q8NDH2 2452 aa10.07□□□□□ -0.8
CTTN-201ENST00000301843 A0A0J9YXV3 536 aa10.06□□□□□ -0.8
CTTN-201ENST00000301843 PRRC2AP48634 2157 aaKnown RBP10.06□□□□□ -0.8
CTTN-201ENST00000301843 TMEM238LA0A1B0GVL6 79 aa10.06□□□□□ -0.8
CTTN-201ENST00000301843 A6NJY4 79 aa10.06□□□□□ -0.8
CTTN-201ENST00000301843 A8MZ25 164 aa10.06□□□□□ -0.8
CTTN-201ENST00000301843 IGHG2P01859 326 aa10.06□□□□□ -0.8
CTTN-201ENST00000301843 ATP6V0BQ99437 205 aa10.06□□□□□ -0.8
CTTN-201ENST00000301843 J3QQQ9 107 aa10.05□□□□□ -0.8
CTTN-201ENST00000301843 VCYO14598 125 aa10.05□□□□□ -0.8
CTTN-201ENST00000301843 HERVK_113P61574 105 aa10.05□□□□□ -0.8
CTTN-201ENST00000301843 DCANP1Q8TF63 244 aa10.05□□□□□ -0.8
CTTN-201ENST00000301843 CARD19Q96LW7 228 aa10.05□□□□□ -0.8
CTTN-201ENST00000301843 DOPEY1Q5JWR5 2465 aa10.05□□□□□ -0.8
CTTN-201ENST00000301843 KLLNB2CW77 178 aa10.05□□□□□ -0.8
CTTN-201ENST00000301843 EIF4EBP3O60516 100 aaPredicted RBP10.05□□□□□ -0.8
CTTN-201ENST00000301843 SPATA25Q9BR10 227 aa10.05□□□□□ -0.8
CTTN-201ENST00000301843 C1QTNF4Q9BXJ3 329 aa10.05□□□□□ -0.8
CTTN-201ENST00000301843 A4D1N5 150 aa10.04□□□□□ -0.8
CTTN-201ENST00000301843 IGHV3-30P01768 117 aa10.04□□□□□ -0.8
CTTN-201ENST00000301843 IGHV4-59P01825 116 aa10.04□□□□□ -0.8
CTTN-201ENST00000301843 IGHV3-30-5P0DP03 117 aa10.04□□□□□ -0.8
CTTN-201ENST00000301843 LGALS3P17931 250 aaKnown RBP10.04□□□□□ -0.8
CTTN-201ENST00000301843 SYNJ2BPP57105 145 aa10.04□□□□□ -0.8
CTTN-201ENST00000301843 ELANEP08246 267 aa10.04□□□□□ -0.8
CTTN-201ENST00000301843 ATP5J2P56134 94 aa10.04□□□□□ -0.8
CTTN-201ENST00000301843 ZNF876PQ49A33 203 aa10.04□□□□□ -0.8
CTTN-201ENST00000301843 SPXQ9BT56 116 aa10.04□□□□□ -0.8
CTTN-201ENST00000301843 Q6ZSV7 163 aa10.04□□□□□ -0.8
CTTN-201ENST00000301843 CDIP1Q9H305 208 aa10.04□□□□□ -0.8
CTTN-201ENST00000301843 TRAV8-3A0A0A6YYJ7 113 aa10.03□□□□□ -0.8
CTTN-201ENST00000301843 XGP55808 180 aa10.03□□□□□ -0.8
CTTN-201ENST00000301843 IGHV3-16A0A0C4DH30 117 aa10.02□□□□□ -0.8
CTTN-201ENST00000301843 A6NDX4 124 aa10.02□□□□□ -0.8
CTTN-201ENST00000301843 CKS1BP61024 79 aa10.02□□□□□ -0.8
CTTN-201ENST00000301843 Q1RN00 199 aa10.02□□□□□ -0.8
CTTN-201ENST00000301843 USMG5Q96IX5 58 aa10.02□□□□□ -0.8
CTTN-201ENST00000301843 PIMREGQ9BSJ6 248 aa10.02□□□□□ -0.8
CTTN-201ENST00000301843 SPINK8P0C7L1 97 aa10.02□□□□□ -0.81
CTTN-201ENST00000301843 DEFB136Q30KP8 78 aa10.02□□□□□ -0.81
CTTN-201ENST00000301843 AMELXQ99217 191 aa10.02□□□□□ -0.81
CTTN-201ENST00000301843 CCL19Q99731 98 aa10.02□□□□□ -0.81
CTTN-201ENST00000301843 M0QY20 66 aa10.02□□□□□ -0.81
CTTN-201ENST00000301843 PRSS2P07478 247 aa10.02□□□□□ -0.81
CTTN-201ENST00000301843 CLUHP3Q96NS8 147 aa10.02□□□□□ -0.81
CTTN-201ENST00000301843 DUX3Q96PT4 197 aa10.02□□□□□ -0.81
CTTN-201ENST00000301843 C9JAW5 83 aa10.01□□□□□ -0.81
CTTN-201ENST00000301843 MUSTN1Q8IVN3 82 aa10.01□□□□□ -0.81
CTTN-201ENST00000301843 ANKRD29Q8N6D5 301 aa10.01□□□□□ -0.81
CTTN-201ENST00000301843 IGHV4OR15-8A0A075B7B6 117 aa10.01□□□□□ -0.81
CTTN-201ENST00000301843 A0A087WW49 117 aa10.01□□□□□ -0.81
CTTN-201ENST00000301843 UBE2D3P61077 147 aa10.01□□□□□ -0.81
CTTN-201ENST00000301843 UBE2D2P62837 147 aa10.01□□□□□ -0.81
CTTN-201ENST00000301843 SLC25A29Q8N8R3 303 aa10.01□□□□□ -0.81
CTTN-201ENST00000301843 ID1P41134 155 aa10.01□□□□□ -0.81
CTTN-201ENST00000301843 C10orf105Q8TEF2 133 aa10.01□□□□□ -0.81
CTTN-201ENST00000301843 IGHV3-38A0A0C4DH36 116 aa10□□□□□ -0.81
CTTN-201ENST00000301843 APRG1Q8IVJ8 170 aa10□□□□□ -0.81
CTTN-201ENST00000301843 C10orf126Q8N4M7 172 aa10□□□□□ -0.81
CTTN-201ENST00000301843 PRO1854Q9UHT4 67 aa10□□□□□ -0.81
CTTN-201ENST00000301843 ZNF469Q96JG9 3925 aaPredicted RBP10□□□□□ -0.81
CTTN-201ENST00000301843 LINC01619G3V211 115 aa10□□□□□ -0.81
CTTN-201ENST00000301843 NXPH4O95158 308 aa10□□□□□ -0.81
CTTN-201ENST00000301843 PPP1R17O96001 155 aa10□□□□□ -0.81
CTTN-201ENST00000301843 IGLV1-40P01703 118 aa9.99□□□□□ -0.81
CTTN-201ENST00000301843 RBMY1A1P0DJD3 496 aaKnown RBP9.99□□□□□ -0.81
CTTN-201ENST00000301843 RBMY1CP0DJD4 496 aa9.99□□□□□ -0.81
CTTN-201ENST00000301843 RBMY1FQ15415 496 aaKnown RBP9.99□□□□□ -0.81
CTTN-201ENST00000301843 TRBV27A0A0K0K1C4 114 aa9.99□□□□□ -0.81
CTTN-201ENST00000301843 C18orf65Q6ZTR6 163 aa9.99□□□□□ -0.81
CTTN-201ENST00000301843 ZNF462Q96JM2 2506 aa9.99□□□□□ -0.81
CTTN-201ENST00000301843 MED14OSP0DP75 135 aa9.99□□□□□ -0.81
CTTN-201ENST00000301843 ZNF22P17026 224 aaPredicted RBP9.99□□□□□ -0.81
CTTN-201ENST00000301843 DEFB112Q30KQ8 113 aa9.99□□□□□ -0.81
CTTN-201ENST00000301843 DAND5Q8N907 189 aa9.99□□□□□ -0.81
CTTN-201ENST00000301843 A0A0J9YX75 114 aa9.98□□□□□ -0.81
CTTN-201ENST00000301843 CIDEAO60543 219 aa9.98□□□□□ -0.81
CTTN-201ENST00000301843 BRI3O95415 125 aa9.98□□□□□ -0.81
CTTN-201ENST00000301843 IGHV1OR15-1A0A075B7D0 117 aa9.98□□□□□ -0.81
CTTN-201ENST00000301843 TMEM141Q96I45 108 aa9.98□□□□□ -0.81
CTTN-201ENST00000301843 TIMM17AQ99595 171 aa9.98□□□□□ -0.81
CTTN-201ENST00000301843 VCX2Q9H322 139 aa9.98□□□□□ -0.81
CTTN-201ENST00000301843 A0A0U1RRA0 63 aa9.97□□□□□ -0.81
CTTN-201ENST00000301843 A8MWV9 139 aa9.97□□□□□ -0.81
CTTN-201ENST00000301843 H3BUA1 57 aa9.97□□□□□ -0.81
CTTN-201ENST00000301843 LGALS9O00182 355 aa9.97□□□□□ -0.81
CTTN-201ENST00000301843 MSMBP08118 114 aa9.97□□□□□ -0.81
CTTN-201ENST00000301843 TRAV26-1A0A087WT03 109 aa9.97□□□□□ -0.81
CTTN-201ENST00000301843 Q6ZUT4 128 aa9.97□□□□□ -0.81
CTTN-201ENST00000301843 IGLV4-3A0A075B6K6 122 aa9.97□□□□□ -0.81
CTTN-201ENST00000301843 A0A1B0GV72 72 aa9.97□□□□□ -0.81
CTTN-201ENST00000301843 TMEM223A0PJW6 202 aa9.97□□□□□ -0.81
CTTN-201ENST00000301843 TEN1Q86WV5 123 aa9.97□□□□□ -0.81
CTTN-201ENST00000301843 C9orf85Q96MD7 179 aa9.97□□□□□ -0.81
CTTN-201ENST00000301843 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.96□□□□□ -0.81
CTTN-201ENST00000301843 IGKV2-29A2NJV5 120 aaPredicted RBP9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms