RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 POLR2KP53803 58 aaKnown RBP11.3□□□□□ -0.6
HERPUD1-201ENST00000300302 OR4C5Q8NGB2 326 aa11.3□□□□□ -0.6
HERPUD1-201ENST00000300302 KIR2DL4Q99706 377 aa11.3□□□□□ -0.6
HERPUD1-201ENST00000300302 OVOL2Q9BRP0 275 aa11.3□□□□□ -0.6
HERPUD1-201ENST00000300302 PLAC8L1A1L4L8 177 aa11.29□□□□□ -0.6
HERPUD1-201ENST00000300302 SDHAF1A6NFY7 115 aa11.29□□□□□ -0.6
HERPUD1-201ENST00000300302 TSTD3H0UI37 97 aa11.29□□□□□ -0.6
HERPUD1-201ENST00000300302 NUDT3O95989 172 aa11.29□□□□□ -0.6
HERPUD1-201ENST00000300302 EGFEM1PQ0D2K5 195 aa11.29□□□□□ -0.6
HERPUD1-201ENST00000300302 PET117Q6UWS5 81 aa11.29□□□□□ -0.6
HERPUD1-201ENST00000300302 Q6ZTI0 123 aa11.29□□□□□ -0.6
HERPUD1-201ENST00000300302 TRBV27A0A0K0K1C4 114 aa11.29□□□□□ -0.6
HERPUD1-201ENST00000300302 IGHV4-30-4P0DP06 118 aa11.29□□□□□ -0.6
HERPUD1-201ENST00000300302 G0S2P27469 103 aa11.29□□□□□ -0.6
HERPUD1-201ENST00000300302 TRAV4A0A0B4J268 109 aa11.28□□□□□ -0.6
HERPUD1-201ENST00000300302 IGHV3-53P01767 116 aa11.28□□□□□ -0.6
HERPUD1-201ENST00000300302 SPATA12Q7Z6I5 190 aa11.27□□□□□ -0.6
HERPUD1-201ENST00000300302 IFI27L1Q96BM0 104 aa11.27□□□□□ -0.6
HERPUD1-201ENST00000300302 CMYA5Q8N3K9 4069 aa11.27□□□□□ -0.6
HERPUD1-201ENST00000300302 ANK2Q01484 3957 aa11.27□□□□□ -0.61
HERPUD1-201ENST00000300302 CIDEAO60543 219 aa11.27□□□□□ -0.61
HERPUD1-201ENST00000300302 TNFRSF18Q9Y5U5 241 aa11.27□□□□□ -0.61
HERPUD1-201ENST00000300302 TRGV2A0A075B6R0 118 aa11.26□□□□□ -0.61
HERPUD1-201ENST00000300302 H0Y8G0 127 aa11.26□□□□□ -0.61
HERPUD1-201ENST00000300302 ATP5LO75964 103 aa11.26□□□□□ -0.61
HERPUD1-201ENST00000300302 KRTAP10-11P60412 298 aa11.26□□□□□ -0.61
HERPUD1-201ENST00000300302 DEFB135Q30KP9 77 aa11.26□□□□□ -0.61
HERPUD1-201ENST00000300302 NEGR1Q7Z3B1 354 aa11.26□□□□□ -0.61
HERPUD1-201ENST00000300302 X6R8D5 127 aa11.26□□□□□ -0.61
HERPUD1-201ENST00000300302 STAB1Q9NY15 2570 aa11.26□□□□□ -0.61
HERPUD1-201ENST00000300302 GAGE12BA1L429 117 aa11.25□□□□□ -0.61
HERPUD1-201ENST00000300302 LINC01549A6NIU2 74 aa11.25□□□□□ -0.61
HERPUD1-201ENST00000300302 GAGE7O76087 117 aa11.25□□□□□ -0.61
HERPUD1-201ENST00000300302 GAGE12FP0CL80 117 aa11.25□□□□□ -0.61
HERPUD1-201ENST00000300302 GAGE12GP0CL81 117 aa11.25□□□□□ -0.61
HERPUD1-201ENST00000300302 GAGE12IP0CL82 117 aa11.25□□□□□ -0.61
HERPUD1-201ENST00000300302 DDTP30046 118 aa11.25□□□□□ -0.61
HERPUD1-201ENST00000300302 DNAJC30Q96LL9 226 aa11.25□□□□□ -0.61
HERPUD1-201ENST00000300302 C18orf15Q96N68 181 aa11.25□□□□□ -0.61
HERPUD1-201ENST00000300302 VAMP8Q9BV40 100 aa11.25□□□□□ -0.61
HERPUD1-201ENST00000300302 NACAE9PAV3 2078 aa11.25□□□□□ -0.61
HERPUD1-201ENST00000300302 I3L3M4 83 aa11.25□□□□□ -0.61
HERPUD1-201ENST00000300302 EMP1P54849 157 aa11.25□□□□□ -0.61
HERPUD1-201ENST00000300302 Q6ZSN1 163 aa11.25□□□□□ -0.61
HERPUD1-201ENST00000300302 ZNF479Q96JC4 524 aa11.25□□□□□ -0.61
HERPUD1-201ENST00000300302 TOMM6Q96B49 74 aa11.24□□□□□ -0.61
HERPUD1-201ENST00000300302 P0DMU3 169 aa11.23□□□□□ -0.61
HERPUD1-201ENST00000300302 FAM231AP0DMU4 169 aa11.23□□□□□ -0.61
HERPUD1-201ENST00000300302 FAM231CP0DMU5 169 aa11.23□□□□□ -0.61
HERPUD1-201ENST00000300302 LINC01545Q5VT33 79 aa11.23□□□□□ -0.61
HERPUD1-201ENST00000300302 C2orf66Q6UXQ4 117 aa11.23□□□□□ -0.61
HERPUD1-201ENST00000300302 OR11H2Q8NH07 326 aa11.23□□□□□ -0.61
HERPUD1-201ENST00000300302 A8MZ25 164 aa11.23□□□□□ -0.61
HERPUD1-201ENST00000300302 RHOHQ15669 191 aa11.23□□□□□ -0.61
HERPUD1-201ENST00000300302 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.22□□□□□ -0.61
HERPUD1-201ENST00000300302 NEXN-AS1Q8NBZ9 246 aa11.22□□□□□ -0.61
HERPUD1-201ENST00000300302 SCGB3A1Q96QR1 104 aa11.22□□□□□ -0.61
HERPUD1-201ENST00000300302 CYSLTR1Q9Y271 337 aa11.22□□□□□ -0.61
HERPUD1-201ENST00000300302 PAM16Q9Y3D7 125 aa11.22□□□□□ -0.61
HERPUD1-201ENST00000300302 COL6A5A8TX70 2615 aa11.22□□□□□ -0.61
HERPUD1-201ENST00000300302 TRBV10-1A0A0K0K1A3 114 aa11.21□□□□□ -0.61
HERPUD1-201ENST00000300302 PRSS1P07477 247 aa11.21□□□□□ -0.61
HERPUD1-201ENST00000300302 LGALS9CQ6DKI2 356 aa11.21□□□□□ -0.61
HERPUD1-201ENST00000300302 ATOH7Q8N100 152 aa11.21□□□□□ -0.61
HERPUD1-201ENST00000300302 RNF183Q96D59 192 aa11.21□□□□□ -0.61
HERPUD1-201ENST00000300302 G3V4G9 280 aa11.21□□□□□ -0.62
HERPUD1-201ENST00000300302 K7EQD1 137 aa11.21□□□□□ -0.62
HERPUD1-201ENST00000300302 MIFP14174 115 aa11.21□□□□□ -0.62
HERPUD1-201ENST00000300302 RIPPLY3P57055 190 aa11.21□□□□□ -0.62
HERPUD1-201ENST00000300302 TSHBP01222 138 aa11.2□□□□□ -0.62
HERPUD1-201ENST00000300302 Q6ZN92 141 aa11.2□□□□□ -0.62
HERPUD1-201ENST00000300302 TRAV9-2A0A087WT02 112 aa11.19□□□□□ -0.62
HERPUD1-201ENST00000300302 TRGV4A0A0C4DH28 118 aa11.19□□□□□ -0.62
HERPUD1-201ENST00000300302 LYRM9A8MSI8 78 aa11.19□□□□□ -0.62
HERPUD1-201ENST00000300302 SAMD5Q5TGI4 173 aa11.19□□□□□ -0.62
HERPUD1-201ENST00000300302 ERASQ7Z444 233 aa11.19□□□□□ -0.62
HERPUD1-201ENST00000300302 LINC00612Q8N6U2 182 aa11.19□□□□□ -0.62
HERPUD1-201ENST00000300302 TP53TG1Q9Y2A0 90 aa11.19□□□□□ -0.62
HERPUD1-201ENST00000300302 TRBV7-3A0A075B6L6 115 aa11.19□□□□□ -0.62
HERPUD1-201ENST00000300302 DEFB130BP0DP73 79 aa11.19□□□□□ -0.62
HERPUD1-201ENST00000300302 DEFB130AP0DP74 79 aa11.19□□□□□ -0.62
HERPUD1-201ENST00000300302 RPL36AP83881 106 aaKnown RBP11.19□□□□□ -0.62
HERPUD1-201ENST00000300302 SLC25A29Q8N8R3 303 aa11.19□□□□□ -0.62
HERPUD1-201ENST00000300302 DEFB104AQ8WTQ1 72 aa11.19□□□□□ -0.62
HERPUD1-201ENST00000300302 RPL36ALQ969Q0 106 aaKnown RBP11.19□□□□□ -0.62
HERPUD1-201ENST00000300302 TRBV6-4A0A1B0GX49 114 aa11.18□□□□□ -0.62
HERPUD1-201ENST00000300302 HSBP1L1C9JCN9 74 aa11.18□□□□□ -0.62
HERPUD1-201ENST00000300302 DEFA6Q01524 100 aa11.18□□□□□ -0.62
HERPUD1-201ENST00000300302 SPATA45Q537H7 98 aa11.18□□□□□ -0.62
HERPUD1-201ENST00000300302 C14orf144Q96I85 54 aa11.18□□□□□ -0.62
HERPUD1-201ENST00000300302 PMCHL2Q9BQD1 86 aa11.18□□□□□ -0.62
HERPUD1-201ENST00000300302 Q9UF83 564 aa11.18□□□□□ -0.62
HERPUD1-201ENST00000300302 IGHV4-28A0A0C4DH34 117 aa11.17□□□□□ -0.62
HERPUD1-201ENST00000300302 ZNRF2Q8NHG8 242 aa11.17□□□□□ -0.62
HERPUD1-201ENST00000300302 MAJINQ3KP22 176 aa11.17□□□□□ -0.62
HERPUD1-201ENST00000300302 FAM222AQ5U5X8 452 aa11.17□□□□□ -0.62
HERPUD1-201ENST00000300302 COTL1Q14019 142 aa11.16□□□□□ -0.62
HERPUD1-201ENST00000300302 Q8NAQ8 132 aa11.16□□□□□ -0.62
HERPUD1-201ENST00000300302 C20orf203Q8NBC4 194 aa11.16□□□□□ -0.62
HERPUD1-201ENST00000300302 TMEM141Q96I45 108 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms