RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 DNHD1Q96M86 4753 aa7.75□□□□□ -1.17
UPF3B-201ENST00000276201 A8MWV9 139 aa7.75□□□□□ -1.17
UPF3B-201ENST00000276201 H3BUX3 64 aa7.75□□□□□ -1.17
UPF3B-201ENST00000276201 ZNF688P0C7X2 276 aa7.75□□□□□ -1.17
UPF3B-201ENST00000276201 PSMB2P49721 201 aa7.75□□□□□ -1.17
UPF3B-201ENST00000276201 GPHB5Q86YW7 130 aa7.75□□□□□ -1.17
UPF3B-201ENST00000276201 SLC25A29Q8N8R3 303 aa7.75□□□□□ -1.17
UPF3B-201ENST00000276201 GLMPQ8WWB7 406 aa7.75□□□□□ -1.17
UPF3B-201ENST00000276201 TIMM17AQ99595 171 aa7.75□□□□□ -1.17
UPF3B-201ENST00000276201 VPREB3Q9UKI3 123 aa7.75□□□□□ -1.17
UPF3B-201ENST00000276201 IGLV4-69A0A075B6H9 119 aa7.74□□□□□ -1.17
UPF3B-201ENST00000276201 IGHV3-30P01768 117 aa7.74□□□□□ -1.17
UPF3B-201ENST00000276201 CRYGDP07320 174 aa7.74□□□□□ -1.17
UPF3B-201ENST00000276201 IGHV3-30-5P0DP03 117 aa7.74□□□□□ -1.17
UPF3B-201ENST00000276201 ASIPP42127 132 aa7.74□□□□□ -1.17
UPF3B-201ENST00000276201 SRSF9Q13242 221 aaKnown RBP eCLIP7.74□□□□□ -1.17
UPF3B-201ENST00000276201 C10orf126Q8N4M7 172 aa7.74□□□□□ -1.17
UPF3B-201ENST00000276201 ZFAND2AQ8N6M9 145 aa7.74□□□□□ -1.17
UPF3B-201ENST00000276201 PLEKHB2Q96CS7 222 aa7.74□□□□□ -1.17
UPF3B-201ENST00000276201 IGIPA6NJ69 53 aa7.74□□□□□ -1.17
UPF3B-201ENST00000276201 FHL3Q13643 280 aa7.74□□□□□ -1.17
UPF3B-201ENST00000276201 SCGB1D4Q6XE38 83 aa7.74□□□□□ -1.17
UPF3B-201ENST00000276201 MT-ATP8P03928 68 aa7.73□□□□□ -1.17
UPF3B-201ENST00000276201 P0DMU3 169 aa7.73□□□□□ -1.17
UPF3B-201ENST00000276201 FAM231AP0DMU4 169 aa7.73□□□□□ -1.17
UPF3B-201ENST00000276201 FAM231CP0DMU5 169 aa7.73□□□□□ -1.17
UPF3B-201ENST00000276201 CRIP2P52943 208 aaPredicted RBP7.73□□□□□ -1.17
UPF3B-201ENST00000276201 XGP55808 180 aa7.73□□□□□ -1.17
UPF3B-201ENST00000276201 PMVKQ15126 192 aa7.73□□□□□ -1.17
UPF3B-201ENST00000276201 LY6EQ16553 131 aa7.73□□□□□ -1.17
UPF3B-201ENST00000276201 PRR9Q5T870 116 aa7.73□□□□□ -1.17
UPF3B-201ENST00000276201 TCL1BO95988 128 aa7.73□□□□□ -1.17
UPF3B-201ENST00000276201 CITED1Q99966 193 aa7.73□□□□□ -1.17
UPF3B-201ENST00000276201 KIF25-AS1Q9Y6Z4 181 aa7.73□□□□□ -1.17
UPF3B-201ENST00000276201 NDUFA7O95182 113 aa7.72□□□□□ -1.17
UPF3B-201ENST00000276201 BRI3O95415 125 aa7.72□□□□□ -1.17
UPF3B-201ENST00000276201 CFC1BP0CG36 223 aa7.72□□□□□ -1.17
UPF3B-201ENST00000276201 CFC1P0CG37 223 aa7.72□□□□□ -1.17
UPF3B-201ENST00000276201 POLR2KP53803 58 aaKnown RBP7.72□□□□□ -1.17
UPF3B-201ENST00000276201 ZFP2Q6ZN57 461 aa7.72□□□□□ -1.17
UPF3B-201ENST00000276201 AMELXQ99217 191 aa7.72□□□□□ -1.17
UPF3B-201ENST00000276201 A0A0B4J2C4 111 aa7.71□□□□□ -1.17
UPF3B-201ENST00000276201 LOC107984156A0A0G2JMH3 177 aa7.71□□□□□ -1.17
UPF3B-201ENST00000276201 A0A0J9YX75 114 aa7.71□□□□□ -1.17
UPF3B-201ENST00000276201 TRBV6-5A0A0K0K1A5 114 aa7.71□□□□□ -1.17
UPF3B-201ENST00000276201 SOCS3O14543 225 aa7.71□□□□□ -1.17
UPF3B-201ENST00000276201 TSHBP01222 138 aa7.71□□□□□ -1.17
UPF3B-201ENST00000276201 Q6Q795 121 aa7.71□□□□□ -1.17
UPF3B-201ENST00000276201 ARL17AQ8IVW1 177 aa7.71□□□□□ -1.17
UPF3B-201ENST00000276201 RPL39LQ96EH5 51 aaKnown RBP7.71□□□□□ -1.17
UPF3B-201ENST00000276201 SPANXA1Q9NS26 97 aa7.71□□□□□ -1.17
UPF3B-201ENST00000276201 PRO1854Q9UHT4 67 aa7.71□□□□□ -1.17
UPF3B-201ENST00000276201 ANK2Q01484 3957 aa7.71□□□□□ -1.17
UPF3B-201ENST00000276201 FAM223BA6NKX1 122 aa7.71□□□□□ -1.18
UPF3B-201ENST00000276201 LINC00315P59091 139 aa7.71□□□□□ -1.18
UPF3B-201ENST00000276201 C19orf54Q5BKX5 351 aa7.71□□□□□ -1.18
UPF3B-201ENST00000276201 FAM223AQ8IWN6 122 aa7.71□□□□□ -1.18
UPF3B-201ENST00000276201 WFDC12Q8WWY7 111 aa7.71□□□□□ -1.18
UPF3B-201ENST00000276201 C16orf92Q96LL3 132 aa7.71□□□□□ -1.18
UPF3B-201ENST00000276201 PHLDA3Q9Y5J5 127 aa7.71□□□□□ -1.18
UPF3B-201ENST00000276201 A6NDX4 124 aa7.7□□□□□ -1.18
UPF3B-201ENST00000276201 ZNF876PQ49A33 203 aa7.7□□□□□ -1.18
UPF3B-201ENST00000276201 ZFAND6Q6FIF0 208 aa7.7□□□□□ -1.18
UPF3B-201ENST00000276201 CLEC19AQ6UXS0 136 aa7.7□□□□□ -1.18
UPF3B-201ENST00000276201 OR10J6PQ8NGY7 276 aa7.7□□□□□ -1.18
UPF3B-201ENST00000276201 VCYO14598 125 aa7.7□□□□□ -1.18
UPF3B-201ENST00000276201 ATP6V0E1O15342 81 aa7.7□□□□□ -1.18
UPF3B-201ENST00000276201 Q6ZSV7 163 aa7.7□□□□□ -1.18
UPF3B-201ENST00000276201 TMEM219Q86XT9 240 aa7.7□□□□□ -1.18
UPF3B-201ENST00000276201 C20orf173Q96LM9 149 aa7.7□□□□□ -1.18
UPF3B-201ENST00000276201 DUSP14O95147 198 aaKnown RBP7.69□□□□□ -1.18
UPF3B-201ENST00000276201 RNASE3P12724 160 aaKnown RBP7.69□□□□□ -1.18
UPF3B-201ENST00000276201 ANKRD29Q8N6D5 301 aa7.69□□□□□ -1.18
UPF3B-201ENST00000276201 C14orf178Q8N769 122 aaPredicted RBP7.69□□□□□ -1.18
UPF3B-201ENST00000276201 KLK15Q9H2R5 256 aa7.69□□□□□ -1.18
UPF3B-201ENST00000276201 LEPROTO15243 131 aa7.69□□□□□ -1.18
UPF3B-201ENST00000276201 S100A4P26447 101 aaKnown RBP7.69□□□□□ -1.18
UPF3B-201ENST00000276201 ANXA2RQ3ZCQ2 193 aa7.69□□□□□ -1.18
UPF3B-201ENST00000276201 C3orf56Q8N813 242 aa7.69□□□□□ -1.18
UPF3B-201ENST00000276201 IGHV3OR16-8A0A075B7F1 116 aa7.68□□□□□ -1.18
UPF3B-201ENST00000276201 IGHV3-33P01772 117 aa7.68□□□□□ -1.18
UPF3B-201ENST00000276201 SCGB1C2P0DMR2 95 aa7.68□□□□□ -1.18
UPF3B-201ENST00000276201 RPL13AP40429 203 aaKnown RBP7.68□□□□□ -1.18
UPF3B-201ENST00000276201 RHOHQ15669 191 aa7.68□□□□□ -1.18
UPF3B-201ENST00000276201 MRPL23Q16540 153 aaKnown RBP7.68□□□□□ -1.18
UPF3B-201ENST00000276201 ECSCRQ19T08 205 aa7.68□□□□□ -1.18
UPF3B-201ENST00000276201 Q6ZQT7 251 aa7.68□□□□□ -1.18
UPF3B-201ENST00000276201 LINC01006Q8NI28 216 aa7.68□□□□□ -1.18
UPF3B-201ENST00000276201 C16orf95Q9H693 158 aa7.68□□□□□ -1.18
UPF3B-201ENST00000276201 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.68□□□□□ -1.18
UPF3B-201ENST00000276201 IGHV3-35A0A0C4DH35 117 aa7.68□□□□□ -1.18
UPF3B-201ENST00000276201 TRBV27A0A0K0K1C4 114 aa7.68□□□□□ -1.18
UPF3B-201ENST00000276201 LGALS9O00182 355 aa7.68□□□□□ -1.18
UPF3B-201ENST00000276201 RHODO00212 210 aa7.68□□□□□ -1.18
UPF3B-201ENST00000276201 NDUFA4O00483 81 aa7.68□□□□□ -1.18
UPF3B-201ENST00000276201 KLHL30-AS1Q8NEE0 82 aa7.68□□□□□ -1.18
UPF3B-201ENST00000276201 TMEM263Q8WUH6 116 aaKnown RBP7.68□□□□□ -1.18
UPF3B-201ENST00000276201 PTH2Q96A98 100 aa7.68□□□□□ -1.18
UPF3B-201ENST00000276201 RNF183Q96D59 192 aa7.68□□□□□ -1.18
UPF3B-201ENST00000276201 TP53TG1Q9Y2A0 90 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms