RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 Q6ZTI0 123 aa6.83□□□□□ -1.32
SSR3-201ENST00000265044 TMEM263Q8WUH6 116 aaKnown RBP6.83□□□□□ -1.32
SSR3-201ENST00000265044 FAM19A4Q96LR4 140 aa6.83□□□□□ -1.32
SSR3-201ENST00000265044 VCX2Q9H322 139 aa6.83□□□□□ -1.32
SSR3-201ENST00000265044 I3L3M4 83 aa6.83□□□□□ -1.32
SSR3-201ENST00000265044 CTAG1AP78358 180 aa6.83□□□□□ -1.32
SSR3-201ENST00000265044 STPG4Q8N801 248 aa6.83□□□□□ -1.32
SSR3-201ENST00000265044 IGHV4-4A0A075B6R2 117 aa6.82□□□□□ -1.32
SSR3-201ENST00000265044 DPM2O94777 84 aa6.82□□□□□ -1.32
SSR3-201ENST00000265044 C16orf74Q96GX8 76 aa6.82□□□□□ -1.32
SSR3-201ENST00000265044 NOTCH1P46531 2555 aa6.82□□□□□ -1.32
SSR3-201ENST00000265044 TMEM262E9PQX1 116 aa6.82□□□□□ -1.32
SSR3-201ENST00000265044 M0R143 59 aa6.82□□□□□ -1.32
SSR3-201ENST00000265044 IGKCP01834 107 aa6.82□□□□□ -1.32
SSR3-201ENST00000265044 RBMY1A1P0DJD3 496 aaKnown RBP6.82□□□□□ -1.32
SSR3-201ENST00000265044 RBMY1CP0DJD4 496 aa6.82□□□□□ -1.32
SSR3-201ENST00000265044 KRTAP10-3P60369 221 aa6.82□□□□□ -1.32
SSR3-201ENST00000265044 HERVK_113P61574 105 aa6.82□□□□□ -1.32
SSR3-201ENST00000265044 RBMY1FQ15415 496 aaKnown RBP6.82□□□□□ -1.32
SSR3-201ENST00000265044 TMEM97Q5BJF2 176 aa6.82□□□□□ -1.32
SSR3-201ENST00000265044 PAPPA-AS1Q5QFB9 102 aa6.82□□□□□ -1.32
SSR3-201ENST00000265044 SCGB1D4Q6XE38 83 aa6.82□□□□□ -1.32
SSR3-201ENST00000265044 URB1-AS1Q96HZ7 61 aa6.82□□□□□ -1.32
SSR3-201ENST00000265044 C9orf85Q96MD7 179 aa6.82□□□□□ -1.32
SSR3-201ENST00000265044 CHTOPQ9Y3Y2 248 aaKnown RBP6.82□□□□□ -1.32
SSR3-201ENST00000265044 PRADC1Q9BSG0 188 aa6.81□□□□□ -1.32
SSR3-201ENST00000265044 U3KQK5 164 aa6.81□□□□□ -1.32
SSR3-201ENST00000265044 HINT1P49773 126 aaPredicted RBP6.81□□□□□ -1.32
SSR3-201ENST00000265044 OR11H2Q8NH07 326 aa6.81□□□□□ -1.32
SSR3-201ENST00000265044 ZC2HC1BQ5TFG8 222 aa6.81□□□□□ -1.32
SSR3-201ENST00000265044 SHISA2Q6UWI4 295 aa6.81□□□□□ -1.32
SSR3-201ENST00000265044 MIEN1Q9BRT3 115 aa6.81□□□□□ -1.32
SSR3-201ENST00000265044 DKK2Q9UBU2 259 aa6.81□□□□□ -1.32
SSR3-201ENST00000265044 MUC4Q99102 2169 aa6.81□□□□□ -1.32
SSR3-201ENST00000265044 C1orf158Q8N1D5 194 aa6.8□□□□□ -1.32
SSR3-201ENST00000265044 OTOGQ6ZRI0 2925 aa6.8□□□□□ -1.32
SSR3-201ENST00000265044 CRYGDP07320 174 aa6.8□□□□□ -1.32
SSR3-201ENST00000265044 PTTG1IPP53801 180 aa6.8□□□□□ -1.32
SSR3-201ENST00000265044 DAD1P61803 113 aa6.8□□□□□ -1.32
SSR3-201ENST00000265044 RPL39P62891 51 aaKnown RBP6.8□□□□□ -1.32
SSR3-201ENST00000265044 NRACQ8N912 160 aa6.8□□□□□ -1.32
SSR3-201ENST00000265044 SCRT2Q9NQ03 307 aa6.8□□□□□ -1.32
SSR3-201ENST00000265044 ADARB2-AS1A8MUL3 147 aa6.8□□□□□ -1.32
SSR3-201ENST00000265044 KRTAP24-1Q3LI83 254 aa6.8□□□□□ -1.32
SSR3-201ENST00000265044 ZNF479Q96JC4 524 aa6.8□□□□□ -1.32
SSR3-201ENST00000265044 CHCHD5Q9BSY4 110 aa6.8□□□□□ -1.32
SSR3-201ENST00000265044 GEMIN7Q9H840 131 aaKnown RBP6.8□□□□□ -1.32
SSR3-201ENST00000265044 MRPL35Q9NZE8 188 aaKnown RBP6.8□□□□□ -1.32
SSR3-201ENST00000265044 NBEAL2Q6ZNJ1 2754 aa6.8□□□□□ -1.32
SSR3-201ENST00000265044 DNLZQ5SXM8 178 aa6.79□□□□□ -1.32
SSR3-201ENST00000265044 ZFP2Q6ZN57 461 aa6.79□□□□□ -1.32
SSR3-201ENST00000265044 TEX43Q6ZNM6 134 aa6.79□□□□□ -1.32
SSR3-201ENST00000265044 NDUFAF3Q9BU61 184 aa6.79□□□□□ -1.32
SSR3-201ENST00000265044 A0A096LPF7 62 aa6.79□□□□□ -1.32
SSR3-201ENST00000265044 ERASQ7Z444 233 aa6.79□□□□□ -1.32
SSR3-201ENST00000265044 F5H768 121 aa6.79□□□□□ -1.32
SSR3-201ENST00000265044 MRAPQ8TCY5 172 aa6.79□□□□□ -1.32
SSR3-201ENST00000265044 M0QY20 66 aa6.78□□□□□ -1.32
SSR3-201ENST00000265044 RNASE13Q5GAN3 156 aaKnown RBP6.78□□□□□ -1.32
SSR3-201ENST00000265044 CFAP126Q5VTH2 177 aa6.78□□□□□ -1.32
SSR3-201ENST00000265044 LINC01549A6NIU2 74 aa6.78□□□□□ -1.32
SSR3-201ENST00000265044 SMAGPQ0VAQ4 97 aa6.78□□□□□ -1.32
SSR3-201ENST00000265044 BEAN1Q3B7T3 259 aa6.78□□□□□ -1.32
SSR3-201ENST00000265044 LGALS9BQ3B8N2 356 aa6.78□□□□□ -1.32
SSR3-201ENST00000265044 LGALS9CQ6DKI2 356 aa6.78□□□□□ -1.32
SSR3-201ENST00000265044 TMEM101Q96IK0 257 aa6.78□□□□□ -1.32
SSR3-201ENST00000265044 IGHV3-64A0A075B6Q5 118 aa6.78□□□□□ -1.32
SSR3-201ENST00000265044 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.77□□□□□ -1.33
SSR3-201ENST00000265044 A0A0J9YY99 117 aa6.77□□□□□ -1.33
SSR3-201ENST00000265044 IGKV2-29A2NJV5 120 aaPredicted RBP6.77□□□□□ -1.33
SSR3-201ENST00000265044 CITED1Q99966 193 aa6.77□□□□□ -1.33
SSR3-201ENST00000265044 C2orf88Q9BSF0 95 aa6.77□□□□□ -1.33
SSR3-201ENST00000265044 SRSF9Q13242 221 aaKnown RBP eCLIP6.77□□□□□ -1.33
SSR3-201ENST00000265044 K7EMI3 77 aa6.77□□□□□ -1.33
SSR3-201ENST00000265044 ZNF25P17030 456 aaPredicted RBP6.76□□□□□ -1.33
SSR3-201ENST00000265044 PRSS29PA6NIE9 313 aa6.76□□□□□ -1.33
SSR3-201ENST00000265044 K7EQD1 137 aa6.76□□□□□ -1.33
SSR3-201ENST00000265044 IGLC3P0DOY3 106 aa6.76□□□□□ -1.33
SSR3-201ENST00000265044 PLNP26678 52 aa6.76□□□□□ -1.33
SSR3-201ENST00000265044 LINC01545Q5VT33 79 aa6.76□□□□□ -1.33
SSR3-201ENST00000265044 TRBV7-3A0A075B6L6 115 aa6.76□□□□□ -1.33
SSR3-201ENST00000265044 PMVKQ15126 192 aa6.76□□□□□ -1.33
SSR3-201ENST00000265044 RHOHQ15669 191 aa6.76□□□□□ -1.33
SSR3-201ENST00000265044 TRAV13-1A0A0B4J241 112 aa6.75□□□□□ -1.33
SSR3-201ENST00000265044 F8VRH5 84 aa6.75□□□□□ -1.33
SSR3-201ENST00000265044 PRB2P02812 416 aaPredicted RBP6.75□□□□□ -1.33
SSR3-201ENST00000265044 IGHV4-30-4P0DP06 118 aa6.75□□□□□ -1.33
SSR3-201ENST00000265044 LGALS3P17931 250 aaKnown RBP6.75□□□□□ -1.33
SSR3-201ENST00000265044 FAM222AQ5U5X8 452 aa6.75□□□□□ -1.33
SSR3-201ENST00000265044 FAM110AQ9BQ89 295 aa6.75□□□□□ -1.33
SSR3-201ENST00000265044 GCSHP23434 173 aa6.75□□□□□ -1.33
SSR3-201ENST00000265044 OPRPNQ99935 248 aaPredicted RBP6.75□□□□□ -1.33
SSR3-201ENST00000265044 CUBNO60494 3623 aa6.75□□□□□ -1.33
SSR3-201ENST00000265044 TRAV4A0A0B4J268 109 aa6.75□□□□□ -1.33
SSR3-201ENST00000265044 PAX4O43316 350 aa6.75□□□□□ -1.33
SSR3-201ENST00000265044 OR5A1Q8NGJ0 315 aa6.75□□□□□ -1.33
SSR3-201ENST00000265044 A0A087WX48 190 aa6.74□□□□□ -1.33
SSR3-201ENST00000265044 LINC00469Q8N7U9 141 aa6.74□□□□□ -1.33
SSR3-201ENST00000265044 RNASE8Q8TDE3 154 aaKnown RBP6.74□□□□□ -1.33
SSR3-201ENST00000265044 TOMM6Q96B49 74 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 381.3 ms