RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 C5orf56Q8N8D9 126 aa13.55□□□□□ -0.24
NOTCH3-201ENST00000263388 IGKV4-1P06312 121 aa13.55□□□□□ -0.24
NOTCH3-201ENST00000263388 GATA1P15976 413 aaPredicted RBP13.55□□□□□ -0.24
NOTCH3-201ENST00000263388 PIP4P1Q86T03 277 aa13.55□□□□□ -0.24
NOTCH3-201ENST00000263388 SLURP1P55000 103 aa13.54□□□□□ -0.24
NOTCH3-201ENST00000263388 HHLA3Q9XRX5 114 aa13.54□□□□□ -0.24
NOTCH3-201ENST00000263388 H3BT86 120 aa13.54□□□□□ -0.24
NOTCH3-201ENST00000263388 IGKV1-17P01599 117 aa13.54□□□□□ -0.24
NOTCH3-201ENST00000263388 MED14OSP0DP75 135 aa13.54□□□□□ -0.24
NOTCH3-201ENST00000263388 PRSS33Q8NF86 280 aa13.54□□□□□ -0.24
NOTCH3-201ENST00000263388 E9PLD3 99 aa13.54□□□□□ -0.24
NOTCH3-201ENST00000263388 CCL18P55774 89 aa13.54□□□□□ -0.24
NOTCH3-201ENST00000263388 APRG1Q8IVJ8 170 aa13.53□□□□□ -0.24
NOTCH3-201ENST00000263388 H0Y9J4 135 aa13.53□□□□□ -0.24
NOTCH3-201ENST00000263388 CDPF1Q6NVV7 123 aa13.53□□□□□ -0.24
NOTCH3-201ENST00000263388 GTSF1Q8WW33 167 aa13.53□□□□□ -0.24
NOTCH3-201ENST00000263388 FAM167A-AS1Q96KT0 104 aa13.53□□□□□ -0.24
NOTCH3-201ENST00000263388 SLX1AQ9BQ83 275 aa13.53□□□□□ -0.24
NOTCH3-201ENST00000263388 NDUFA1O15239 70 aa13.53□□□□□ -0.24
NOTCH3-201ENST00000263388 CTSGP08311 255 aa13.52□□□□□ -0.24
NOTCH3-201ENST00000263388 ATP5EP56381 51 aaPredicted RBP13.52□□□□□ -0.25
NOTCH3-201ENST00000263388 CASC2Q6XLA1 102 aa13.52□□□□□ -0.25
NOTCH3-201ENST00000263388 IGLV10-54A0A075B6I4 117 aa13.52□□□□□ -0.25
NOTCH3-201ENST00000263388 G3V4G9 280 aa13.52□□□□□ -0.25
NOTCH3-201ENST00000263388 TDRG1Q3Y452 100 aa13.52□□□□□ -0.25
NOTCH3-201ENST00000263388 C11orf86A6NJI1 115 aa13.51□□□□□ -0.25
NOTCH3-201ENST00000263388 TRBV10-2A0A0K0K1G8 114 aa13.51□□□□□ -0.25
NOTCH3-201ENST00000263388 DIRC1Q969H9 104 aa13.51□□□□□ -0.25
NOTCH3-201ENST00000263388 UPK3BQ9BT76 320 aa13.51□□□□□ -0.25
NOTCH3-201ENST00000263388 V9GYY9 64 aa13.51□□□□□ -0.25
NOTCH3-201ENST00000263388 Q8N1Y9 231 aa13.51□□□□□ -0.25
NOTCH3-201ENST00000263388 RITA1Q96K30 269 aa13.5□□□□□ -0.25
NOTCH3-201ENST00000263388 ANKRD39Q53RE8 183 aa13.5□□□□□ -0.25
NOTCH3-201ENST00000263388 AJUBAQ96IF1 538 aa13.5□□□□□ -0.25
NOTCH3-201ENST00000263388 J3QKU1 62 aa13.5□□□□□ -0.25
NOTCH3-201ENST00000263388 SPANXB1Q9NS25 103 aaPredicted RBP13.5□□□□□ -0.25
NOTCH3-201ENST00000263388 WI2-2373I1.2A0A1W2PRP0 233 aa13.5□□□□□ -0.25
NOTCH3-201ENST00000263388 TM2D2Q9BX73 214 aa13.49□□□□□ -0.25
NOTCH3-201ENST00000263388 FXYD2P54710 66 aa13.49□□□□□ -0.25
NOTCH3-201ENST00000263388 RNF183Q96D59 192 aa13.49□□□□□ -0.25
NOTCH3-201ENST00000263388 SRCAPQ6ZRS2 3230 aa13.49□□□□□ -0.25
NOTCH3-201ENST00000263388 Q6ZSR3 168 aa13.49□□□□□ -0.25
NOTCH3-201ENST00000263388 C2orf70A6NJV1 201 aa13.48□□□□□ -0.25
NOTCH3-201ENST00000263388 K7EMT4 169 aa13.48□□□□□ -0.25
NOTCH3-201ENST00000263388 RPL39P62891 51 aaKnown RBP13.48□□□□□ -0.25
NOTCH3-201ENST00000263388 DEFB113Q30KQ7 82 aa13.48□□□□□ -0.25
NOTCH3-201ENST00000263388 IGF2-ASQ6U949 168 aa13.48□□□□□ -0.25
NOTCH3-201ENST00000263388 ODF1Q14990 250 aa13.48□□□□□ -0.25
NOTCH3-201ENST00000263388 Q6ZUT4 128 aa13.48□□□□□ -0.25
NOTCH3-201ENST00000263388 GPHB5Q86YW7 130 aa13.48□□□□□ -0.25
NOTCH3-201ENST00000263388 TRBV6-1A0A0K0K1D8 114 aa13.47□□□□□ -0.25
NOTCH3-201ENST00000263388 IGFL2Q6UWQ7 119 aa13.47□□□□□ -0.25
NOTCH3-201ENST00000263388 FAM240AA0A1B0GVK7 77 aa13.47□□□□□ -0.25
NOTCH3-201ENST00000263388 FGF23Q9GZV9 251 aaPredicted RBP13.47□□□□□ -0.25
NOTCH3-201ENST00000263388 USP17L23D6RBM5 183 aa13.47□□□□□ -0.25
NOTCH3-201ENST00000263388 IGHV4-38-2P0DP08 117 aa13.47□□□□□ -0.25
NOTCH3-201ENST00000263388 PIFOQ8TCI5 191 aa13.47□□□□□ -0.25
NOTCH3-201ENST00000263388 IGHV1-58A0A0C4DH39 117 aa13.47□□□□□ -0.25
NOTCH3-201ENST00000263388 WFDC2Q14508 124 aa13.47□□□□□ -0.25
NOTCH3-201ENST00000263388 Q8N9W7 124 aa13.47□□□□□ -0.25
NOTCH3-201ENST00000263388 NDUFC2-KCTD14E9PQ53 114 aa13.46□□□□□ -0.25
NOTCH3-201ENST00000263388 A0A0J9YXV3 536 aa13.46□□□□□ -0.25
NOTCH3-201ENST00000263388 LINC00643Q86TS7 51 aa13.46□□□□□ -0.25
NOTCH3-201ENST00000263388 LINC00173Q6ZV60 143 aa13.46□□□□□ -0.25
NOTCH3-201ENST00000263388 TMEM263Q8WUH6 116 aaKnown RBP13.46□□□□□ -0.25
NOTCH3-201ENST00000263388 NDUFV3P56181 108 aaKnown RBP13.46□□□□□ -0.26
NOTCH3-201ENST00000263388 ATP5EP2Q5VTU8 51 aa13.46□□□□□ -0.26
NOTCH3-201ENST00000263388 B9D2Q9BPU9 175 aa13.46□□□□□ -0.26
NOTCH3-201ENST00000263388 UQCRQO14949 82 aa13.46□□□□□ -0.26
NOTCH3-201ENST00000263388 FAM110AQ9BQ89 295 aa13.46□□□□□ -0.26
NOTCH3-201ENST00000263388 C4orf3Q8WVX3 66 aa13.45□□□□□ -0.26
NOTCH3-201ENST00000263388 LECT2O14960 151 aa13.45□□□□□ -0.26
NOTCH3-201ENST00000263388 SPRNQ5BIV9 151 aa13.45□□□□□ -0.26
NOTCH3-201ENST00000263388 DAND5Q8N907 189 aa13.45□□□□□ -0.26
NOTCH3-201ENST00000263388 MSRB1Q9NZV6 116 aa13.44□□□□□ -0.26
NOTCH3-201ENST00000263388 BLCAPP62952 87 aa13.44□□□□□ -0.26
NOTCH3-201ENST00000263388 NCR3O14931 201 aa13.44□□□□□ -0.26
NOTCH3-201ENST00000263388 IGLV2-23P01705 113 aa13.44□□□□□ -0.26
NOTCH3-201ENST00000263388 TMEM89A2RUT3 159 aa13.43□□□□□ -0.26
NOTCH3-201ENST00000263388 NUPR1O60356 82 aa13.43□□□□□ -0.26
NOTCH3-201ENST00000263388 NDUFC1O43677 76 aa13.43□□□□□ -0.26
NOTCH3-201ENST00000263388 KIR2DL5BQ8NHK3 375 aa13.43□□□□□ -0.26
NOTCH3-201ENST00000263388 TEX22C9J3V5 150 aa13.43□□□□□ -0.26
NOTCH3-201ENST00000263388 MPLKIPQ8TAP9 179 aa13.43□□□□□ -0.26
NOTCH3-201ENST00000263388 PATE2Q6UY27 113 aa13.43□□□□□ -0.26
NOTCH3-201ENST00000263388 IGHV4-61A0A0C4DH41 118 aa13.42□□□□□ -0.26
NOTCH3-201ENST00000263388 SPRY2O43597 315 aa13.42□□□□□ -0.26
NOTCH3-201ENST00000263388 IGHV4OR15-8A0A075B7B6 117 aa13.42□□□□□ -0.26
NOTCH3-201ENST00000263388 A0A087WW49 117 aa13.42□□□□□ -0.26
NOTCH3-201ENST00000263388 CLEC2BQ92478 149 aa13.42□□□□□ -0.26
NOTCH3-201ENST00000263388 BPY2O14599 106 aa13.42□□□□□ -0.26
NOTCH3-201ENST00000263388 TLN1Q9Y490 2541 aaKnown RBP13.42□□□□□ -0.26
NOTCH3-201ENST00000263388 SETD2Q9BYW2 2564 aaPredicted RBP13.42□□□□□ -0.26
NOTCH3-201ENST00000263388 GRNP28799 593 aaKnown RBP13.42□□□□□ -0.26
NOTCH3-201ENST00000263388 FAM236DA0A1B0GTK5 79 aa13.41□□□□□ -0.26
NOTCH3-201ENST00000263388 IGLV2-14P01704 120 aa13.41□□□□□ -0.26
NOTCH3-201ENST00000263388 FAM236CP0DP71 79 aa13.41□□□□□ -0.26
NOTCH3-201ENST00000263388 TRAV23DV6A0A075B6W5 121 aa13.41□□□□□ -0.26
NOTCH3-201ENST00000263388 IGHV4-30-2A0A087WSY4 118 aa13.41□□□□□ -0.26
NOTCH3-201ENST00000263388 C3orf22Q8N5N4 141 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms