RNA–Protein interactions for RNA: ENST00000262426.5

FOXF1-201, Transcript of forkhead box F1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXF1, Length 3,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1-201ENST00000262426 GAGE2EQ4V326 116 aa10.88□□□□□ -0.67
FOXF1-201ENST00000262426 DLX4Q92988 240 aaPredicted RBP10.88□□□□□ -0.67
FOXF1-201ENST00000262426 GAGE2DQ9UEU5 116 aa10.88□□□□□ -0.67
FOXF1-201ENST00000262426 HOXD3P31249 432 aaPredicted RBP10.88□□□□□ -0.67
FOXF1-201ENST00000262426 MORN3Q6PF18 240 aaPredicted RBP10.88□□□□□ -0.67
FOXF1-201ENST00000262426 Q6ZSV7 163 aa10.88□□□□□ -0.67
FOXF1-201ENST00000262426 ANKRD29Q8N6D5 301 aa10.88□□□□□ -0.67
FOXF1-201ENST00000262426 CFAP126Q5VTH2 177 aa10.88□□□□□ -0.67
FOXF1-201ENST00000262426 RAX2Q96IS3 184 aa10.88□□□□□ -0.67
FOXF1-201ENST00000262426 SLC50A1Q9BRV3 221 aa10.88□□□□□ -0.67
FOXF1-201ENST00000262426 GAGE12JA6NER3 117 aa10.87□□□□□ -0.67
FOXF1-201ENST00000262426 SNCGO76070 127 aa10.87□□□□□ -0.67
FOXF1-201ENST00000262426 GAGE7O76087 117 aa10.87□□□□□ -0.67
FOXF1-201ENST00000262426 GAGE12FP0CL80 117 aa10.87□□□□□ -0.67
FOXF1-201ENST00000262426 GAGE12GP0CL81 117 aa10.87□□□□□ -0.67
FOXF1-201ENST00000262426 GAGE12IP0CL82 117 aa10.87□□□□□ -0.67
FOXF1-201ENST00000262426 GAGE4Q13068 117 aa10.87□□□□□ -0.67
FOXF1-201ENST00000262426 PRR9Q5T870 116 aa10.87□□□□□ -0.67
FOXF1-201ENST00000262426 TMEM78Q5T7P6 136 aa10.87□□□□□ -0.67
FOXF1-201ENST00000262426 KLHL30-AS1Q8NEE0 82 aa10.87□□□□□ -0.67
FOXF1-201ENST00000262426 C11orf21Q9P2W6 132 aa10.87□□□□□ -0.67
FOXF1-201ENST00000262426 ZNF688P0C7X2 276 aa10.87□□□□□ -0.67
FOXF1-201ENST00000262426 GFRA4Q9GZZ7 299 aa10.86□□□□□ -0.67
FOXF1-201ENST00000262426 M0QXV9 152 aa10.85□□□□□ -0.67
FOXF1-201ENST00000262426 CT83Q5H943 113 aa10.85□□□□□ -0.67
FOXF1-201ENST00000262426 MEIG1Q5JSS6 88 aa10.85□□□□□ -0.67
FOXF1-201ENST00000262426 ZNF575Q86XF7 245 aa10.85□□□□□ -0.67
FOXF1-201ENST00000262426 DPF1Q92782 380 aa10.85□□□□□ -0.67
FOXF1-201ENST00000262426 MAP1LC3AQ9H492 121 aa10.85□□□□□ -0.67
FOXF1-201ENST00000262426 NDUFV3P56181 108 aaKnown RBP10.85□□□□□ -0.67
FOXF1-201ENST00000262426 FABP5P3A8MUU1 101 aa10.85□□□□□ -0.67
FOXF1-201ENST00000262426 TCL1BO95988 128 aa10.85□□□□□ -0.67
FOXF1-201ENST00000262426 TRPT1Q86TN4 253 aaKnown RBP10.85□□□□□ -0.67
FOXF1-201ENST00000262426 LGALS1P09382 135 aaKnown RBP10.84□□□□□ -0.67
FOXF1-201ENST00000262426 PPDPFLQ8WWR9 84 aa10.84□□□□□ -0.67
FOXF1-201ENST00000262426 PLEKHB2Q96CS7 222 aa10.84□□□□□ -0.67
FOXF1-201ENST00000262426 C9JAW5 83 aa10.84□□□□□ -0.67
FOXF1-201ENST00000262426 NSD1Q96L73 2696 aaPredicted RBP10.84□□□□□ -0.67
FOXF1-201ENST00000262426 F8P00451 2351 aa10.84□□□□□ -0.67
FOXF1-201ENST00000262426 SOCS3O14543 225 aa10.83□□□□□ -0.68
FOXF1-201ENST00000262426 TRBV6-1A0A0K0K1D8 114 aa10.83□□□□□ -0.68
FOXF1-201ENST00000262426 ELANEP08246 267 aa10.83□□□□□ -0.68
FOXF1-201ENST00000262426 FAM110AQ9BQ89 295 aa10.83□□□□□ -0.68
FOXF1-201ENST00000262426 VWFP04275 2813 aa10.83□□□□□ -0.68
FOXF1-201ENST00000262426 IGKV3D-20A0A0C4DH25 116 aa10.83□□□□□ -0.68
FOXF1-201ENST00000262426 PSMG4Q5JS54 123 aa10.83□□□□□ -0.68
FOXF1-201ENST00000262426 UBE2E2Q96LR5 201 aa10.83□□□□□ -0.68
FOXF1-201ENST00000262426 A8MWV9 139 aa10.82□□□□□ -0.68
FOXF1-201ENST00000262426 TNFRSF6BO95407 300 aa10.82□□□□□ -0.68
FOXF1-201ENST00000262426 CHCHD5Q9BSY4 110 aa10.82□□□□□ -0.68
FOXF1-201ENST00000262426 HIGD1BQ9P298 99 aa10.82□□□□□ -0.68
FOXF1-201ENST00000262426 ZNF815PA8K554 130 aa10.81□□□□□ -0.68
FOXF1-201ENST00000262426 TENM1Q9UKZ4 2725 aa10.81□□□□□ -0.68
FOXF1-201ENST00000262426 CYSRT1A8MQ03 144 aa10.81□□□□□ -0.68
FOXF1-201ENST00000262426 RNASE4P34096 147 aaKnown RBP10.81□□□□□ -0.68
FOXF1-201ENST00000262426 TEN1Q86WV5 123 aa10.81□□□□□ -0.68
FOXF1-201ENST00000262426 ZNF580Q9UK33 172 aa10.81□□□□□ -0.68
FOXF1-201ENST00000262426 CD28P10747 220 aa10.81□□□□□ -0.68
FOXF1-201ENST00000262426 OR10J6PQ8NGY7 276 aa10.81□□□□□ -0.68
FOXF1-201ENST00000262426 MYOZ3Q8TDC0 251 aa10.81□□□□□ -0.68
FOXF1-201ENST00000262426 DCANP1Q8TF63 244 aa10.81□□□□□ -0.68
FOXF1-201ENST00000262426 LOC107984640A0A0U1RRK4 108 aa10.8□□□□□ -0.68
FOXF1-201ENST00000262426 IFITM1P13164 125 aa10.8□□□□□ -0.68
FOXF1-201ENST00000262426 TRAV12-2A0A075B6T6 113 aa10.8□□□□□ -0.68
FOXF1-201ENST00000262426 LY6G6DO95868 133 aa10.8□□□□□ -0.68
FOXF1-201ENST00000262426 NTN5Q8WTR8 489 aaPredicted RBP10.8□□□□□ -0.68
FOXF1-201ENST00000262426 ATRQ13535 2644 aa10.8□□□□□ -0.68
FOXF1-201ENST00000262426 Q1RN00 199 aa10.79□□□□□ -0.68
FOXF1-201ENST00000262426 C9orf47Q6ZRZ4 202 aa10.79□□□□□ -0.68
FOXF1-201ENST00000262426 TRBV7-3A0A075B6L6 115 aa10.78□□□□□ -0.68
FOXF1-201ENST00000262426 CITED2Q99967 270 aaPredicted RBP10.78□□□□□ -0.68
FOXF1-201ENST00000262426 IGHV3-64A0A075B6Q5 118 aa10.78□□□□□ -0.68
FOXF1-201ENST00000262426 TEX49A0A1B0GTD5 131 aa10.78□□□□□ -0.68
FOXF1-201ENST00000262426 MYMXA0A1B0GTQ4 84 aa10.78□□□□□ -0.68
FOXF1-201ENST00000262426 K7EMT4 169 aa10.78□□□□□ -0.68
FOXF1-201ENST00000262426 Q8N2B8 174 aa10.78□□□□□ -0.68
FOXF1-201ENST00000262426 ZFAND2AQ8N6M9 145 aa10.78□□□□□ -0.68
FOXF1-201ENST00000262426 GNRH2O43555 120 aa10.77□□□□□ -0.69
FOXF1-201ENST00000262426 RBAKDNA6NC62 111 aa10.77□□□□□ -0.69
FOXF1-201ENST00000262426 INAFM1C9JVW0 142 aa10.77□□□□□ -0.69
FOXF1-201ENST00000262426 C15orf53Q8NAA6 179 aa10.77□□□□□ -0.69
FOXF1-201ENST00000262426 LINC01006Q8NI28 216 aa10.77□□□□□ -0.69
FOXF1-201ENST00000262426 PRADC1Q9BSG0 188 aa10.76□□□□□ -0.69
FOXF1-201ENST00000262426 LINC01619G3V211 115 aa10.76□□□□□ -0.69
FOXF1-201ENST00000262426 PRM2P04554 102 aa10.76□□□□□ -0.69
FOXF1-201ENST00000262426 HTN1P15515 57 aa10.76□□□□□ -0.69
FOXF1-201ENST00000262426 KLK5Q9Y337 293 aaPredicted RBP10.76□□□□□ -0.69
FOXF1-201ENST00000262426 TNFRSF18Q9Y5U5 241 aa10.76□□□□□ -0.69
FOXF1-201ENST00000262426 TRAV12-3A0A0B4J271 114 aa10.75□□□□□ -0.69
FOXF1-201ENST00000262426 TMEM89A2RUT3 159 aa10.75□□□□□ -0.69
FOXF1-201ENST00000262426 KNCNA6PVL3 124 aa10.75□□□□□ -0.69
FOXF1-201ENST00000262426 SLC25A20O43772 301 aa10.75□□□□□ -0.69
FOXF1-201ENST00000262426 TMEM262E9PQX1 116 aa10.75□□□□□ -0.69
FOXF1-201ENST00000262426 TMEM61Q8N0U2 210 aa10.75□□□□□ -0.69
FOXF1-201ENST00000262426 M0R381 172 aa10.74□□□□□ -0.69
FOXF1-201ENST00000262426 RHODO00212 210 aa10.74□□□□□ -0.69
FOXF1-201ENST00000262426 IGLC6P0CF74 106 aa10.74□□□□□ -0.69
FOXF1-201ENST00000262426 SPINK13Q1W4C9 94 aa10.74□□□□□ -0.69
FOXF1-201ENST00000262426 COX8CQ7Z4L0 72 aa10.74□□□□□ -0.69
FOXF1-201ENST00000262426 TRRAPQ9Y4A5 3859 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms