RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 C10orf105Q8TEF2 133 aa10.95□□□□□ -0.66
CUX2-201ENST00000261726 SLX1AQ9BQ83 275 aa10.95□□□□□ -0.66
CUX2-201ENST00000261726 UPK3BQ9BT76 320 aa10.95□□□□□ -0.66
CUX2-201ENST00000261726 FOXI1Q12951 378 aa10.95□□□□□ -0.66
CUX2-201ENST00000261726 SIRPDQ9H106 197 aa10.95□□□□□ -0.66
CUX2-201ENST00000261726 KIR2DL5BA0A0G2JN68 375 aa10.94□□□□□ -0.66
CUX2-201ENST00000261726 KIR2DL5BA0A0G2JPC4 375 aa10.94□□□□□ -0.66
CUX2-201ENST00000261726 MYCNOSP40205 109 aa10.94□□□□□ -0.66
CUX2-201ENST00000261726 KIR2DL5AQ8N109 375 aa10.94□□□□□ -0.66
CUX2-201ENST00000261726 TEX22C9J3V5 150 aa10.94□□□□□ -0.66
CUX2-201ENST00000261726 E9PLD3 99 aa10.94□□□□□ -0.66
CUX2-201ENST00000261726 BPY2O14599 106 aa10.93□□□□□ -0.66
CUX2-201ENST00000261726 IGHV1-58A0A0C4DH39 117 aa10.93□□□□□ -0.66
CUX2-201ENST00000261726 C11orf45Q8TAV5 145 aa10.93□□□□□ -0.66
CUX2-201ENST00000261726 ZNF106Q9H2Y7 1883 aaKnown RBP10.93□□□□□ -0.66
CUX2-201ENST00000261726 P0DMU3 169 aa10.93□□□□□ -0.66
CUX2-201ENST00000261726 FAM231AP0DMU4 169 aa10.93□□□□□ -0.66
CUX2-201ENST00000261726 FAM231CP0DMU5 169 aa10.93□□□□□ -0.66
CUX2-201ENST00000261726 Q6ZUT4 128 aa10.93□□□□□ -0.66
CUX2-201ENST00000261726 SCXQ7RTU7 201 aa10.93□□□□□ -0.66
CUX2-201ENST00000261726 PTH2Q96A98 100 aa10.92□□□□□ -0.66
CUX2-201ENST00000261726 MLST8Q9BVC4 326 aa10.92□□□□□ -0.66
CUX2-201ENST00000261726 USP17L23D6RBM5 183 aa10.92□□□□□ -0.66
CUX2-201ENST00000261726 FAM19A1Q7Z5A9 133 aa10.92□□□□□ -0.66
CUX2-201ENST00000261726 LINC00269Q8N2A0 174 aa10.92□□□□□ -0.66
CUX2-201ENST00000261726 TMEM263Q8WUH6 116 aaKnown RBP10.92□□□□□ -0.66
CUX2-201ENST00000261726 A0A087WZ39 114 aa10.92□□□□□ -0.66
CUX2-201ENST00000261726 PIP4P1Q86T03 277 aa10.92□□□□□ -0.66
CUX2-201ENST00000261726 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.91□□□□□ -0.66
CUX2-201ENST00000261726 PRO0255Q9UI72 69 aa10.91□□□□□ -0.66
CUX2-201ENST00000261726 A0A0J9YWU9 116 aa10.91□□□□□ -0.66
CUX2-201ENST00000261726 ADORA2A-AS1P86434 159 aa10.9□□□□□ -0.66
CUX2-201ENST00000261726 UNQ9165/PRO28630Q6UXU0 137 aa10.9□□□□□ -0.66
CUX2-201ENST00000261726 C3orf22Q8N5N4 141 aa10.9□□□□□ -0.66
CUX2-201ENST00000261726 WFDC10BQ8IUB3 73 aa10.9□□□□□ -0.66
CUX2-201ENST00000261726 TAX1BP3O14907 124 aa10.89□□□□□ -0.67
CUX2-201ENST00000261726 ALPK3Q96L96 1907 aa10.89□□□□□ -0.67
CUX2-201ENST00000261726 TRBV6-1A0A0K0K1D8 114 aa10.89□□□□□ -0.67
CUX2-201ENST00000261726 K7EMT4 169 aa10.89□□□□□ -0.67
CUX2-201ENST00000261726 LYPD6Q86Y78 171 aa10.89□□□□□ -0.67
CUX2-201ENST00000261726 TP53TG3Q9ULZ0 132 aa10.89□□□□□ -0.67
CUX2-201ENST00000261726 IGKV1D-37A0A075B6S9 117 aa10.89□□□□□ -0.67
CUX2-201ENST00000261726 C14orf177Q52M58 125 aa10.89□□□□□ -0.67
CUX2-201ENST00000261726 LYPD6BQ8NI32 183 aa10.89□□□□□ -0.67
CUX2-201ENST00000261726 PLCE1Q9P212 2302 aa10.89□□□□□ -0.67
CUX2-201ENST00000261726 MAP6D1Q9H9H5 199 aa10.89□□□□□ -0.67
CUX2-201ENST00000261726 K7ERS5 55 aa10.88□□□□□ -0.67
CUX2-201ENST00000261726 REG3AQ06141 175 aa10.88□□□□□ -0.67
CUX2-201ENST00000261726 FAM167A-AS1Q96KT0 104 aa10.88□□□□□ -0.67
CUX2-201ENST00000261726 HIGD1BQ9P298 99 aa10.88□□□□□ -0.67
CUX2-201ENST00000261726 COL4A3Q01955 1670 aa10.88□□□□□ -0.67
CUX2-201ENST00000261726 SPTAN1Q13813 2472 aaKnown RBP10.88□□□□□ -0.67
CUX2-201ENST00000261726 CRYGDP07320 174 aa10.88□□□□□ -0.67
CUX2-201ENST00000261726 H3BT86 120 aa10.87□□□□□ -0.67
CUX2-201ENST00000261726 ODF1Q14990 250 aa10.87□□□□□ -0.67
CUX2-201ENST00000261726 SDIM1Q6ZPB5 146 aa10.87□□□□□ -0.67
CUX2-201ENST00000261726 Q8N7P7 452 aa10.87□□□□□ -0.67
CUX2-201ENST00000261726 Q8NFD4 153 aa10.87□□□□□ -0.67
CUX2-201ENST00000261726 DNAJC9-AS1A6NH13 148 aa10.87□□□□□ -0.67
CUX2-201ENST00000261726 E7EUB6 86 aa10.87□□□□□ -0.67
CUX2-201ENST00000261726 SLPIP03973 132 aa10.87□□□□□ -0.67
CUX2-201ENST00000261726 MED14OSP0DP75 135 aa10.87□□□□□ -0.67
CUX2-201ENST00000261726 MIAQ16674 131 aa10.87□□□□□ -0.67
CUX2-201ENST00000261726 ZFAND2AQ8N6M9 145 aa10.87□□□□□ -0.67
CUX2-201ENST00000261726 FAM19A5Q7Z5A7 132 aaPredicted RBP10.86□□□□□ -0.67
CUX2-201ENST00000261726 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.86□□□□□ -0.67
CUX2-201ENST00000261726 TCL1BO95988 128 aa10.86□□□□□ -0.67
CUX2-201ENST00000261726 CTRLP40313 264 aa10.86□□□□□ -0.67
CUX2-201ENST00000261726 ZGRF1Q86YA3 2104 aa10.86□□□□□ -0.67
CUX2-201ENST00000261726 RNASE8Q8TDE3 154 aaKnown RBP10.86□□□□□ -0.67
CUX2-201ENST00000261726 C20orf203Q8NBC4 194 aa10.86□□□□□ -0.67
CUX2-201ENST00000261726 A0A0J9YX75 114 aa10.85□□□□□ -0.67
CUX2-201ENST00000261726 PDE6GP18545 87 aa10.85□□□□□ -0.67
CUX2-201ENST00000261726 Q6ZTI0 123 aa10.85□□□□□ -0.67
CUX2-201ENST00000261726 NDUFA11Q86Y39 141 aa10.85□□□□□ -0.67
CUX2-201ENST00000261726 UFSP1Q6NVU6 142 aa10.85□□□□□ -0.67
CUX2-201ENST00000261726 TNRC6AQ8NDV7 1962 aaKnown RBP10.85□□□□□ -0.67
CUX2-201ENST00000261726 IL17DQ8TAD2 202 aa10.85□□□□□ -0.67
CUX2-201ENST00000261726 FRMD6-AS1P0C7T7 363 aa10.84□□□□□ -0.67
CUX2-201ENST00000261726 C20orf197Q8N268 126 aa10.84□□□□□ -0.67
CUX2-201ENST00000261726 A0A0U1RQV1 116 aa10.84□□□□□ -0.67
CUX2-201ENST00000261726 HRCT1Q6UXD1 115 aa10.84□□□□□ -0.67
CUX2-201ENST00000261726 CHCHD10Q8WYQ3 142 aaPredicted RBP10.84□□□□□ -0.67
CUX2-201ENST00000261726 TEX49A0A1B0GTD5 131 aa10.83□□□□□ -0.68
CUX2-201ENST00000261726 FAM222AQ5U5X8 452 aa10.83□□□□□ -0.68
CUX2-201ENST00000261726 ENHOQ6UWT2 76 aa10.82□□□□□ -0.68
CUX2-201ENST00000261726 G3V4G9 280 aa10.82□□□□□ -0.68
CUX2-201ENST00000261726 A0A0J9YXY3 114 aa10.82□□□□□ -0.68
CUX2-201ENST00000261726 DCANP1Q8TF63 244 aa10.82□□□□□ -0.68
CUX2-201ENST00000261726 TRBV10-1A0A0K0K1A3 114 aa10.82□□□□□ -0.68
CUX2-201ENST00000261726 INSL3P51460 131 aa10.82□□□□□ -0.68
CUX2-201ENST00000261726 KIR2DL5BQ8NHK3 375 aa10.82□□□□□ -0.68
CUX2-201ENST00000261726 HIST2H2BDQ6DRA6 164 aa10.81□□□□□ -0.68
CUX2-201ENST00000261726 LINC00643Q86TS7 51 aa10.81□□□□□ -0.68
CUX2-201ENST00000261726 DEFB131BA0A096LNP1 70 aa10.81□□□□□ -0.68
CUX2-201ENST00000261726 SPINK6Q6UWN8 80 aa10.81□□□□□ -0.68
CUX2-201ENST00000261726 PLA2G2EQ9NZK7 142 aa10.81□□□□□ -0.68
CUX2-201ENST00000261726 ODF3L1Q8IXM7 274 aa10.81□□□□□ -0.68
CUX2-201ENST00000261726 LINC00467Q9BRT7 94 aa10.81□□□□□ -0.68
CUX2-201ENST00000261726 LOXL1Q08397 574 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms