RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 IGHV3-73A0A0B4J1V6 119 aa10.83□□□□□ -0.68
SFSWAP-201ENST00000261674 TMEM238LA0A1B0GVL6 79 aa10.82□□□□□ -0.68
SFSWAP-201ENST00000261674 A6NJY4 79 aa10.82□□□□□ -0.68
SFSWAP-201ENST00000261674 CRYGDP07320 174 aa10.82□□□□□ -0.68
SFSWAP-201ENST00000261674 SPINK13Q1W4C9 94 aa10.82□□□□□ -0.68
SFSWAP-201ENST00000261674 USMG5Q96IX5 58 aa10.82□□□□□ -0.68
SFSWAP-201ENST00000261674 HIVEP1P15822 2718 aa10.82□□□□□ -0.68
SFSWAP-201ENST00000261674 B4DSR2 109 aa10.82□□□□□ -0.68
SFSWAP-201ENST00000261674 TSHBP01222 138 aa10.82□□□□□ -0.68
SFSWAP-201ENST00000261674 ID1P41134 155 aa10.82□□□□□ -0.68
SFSWAP-201ENST00000261674 NDUFS8O00217 210 aa10.81□□□□□ -0.68
SFSWAP-201ENST00000261674 VCYO14598 125 aa10.81□□□□□ -0.68
SFSWAP-201ENST00000261674 AKAP9Q99996 3911 aa10.81□□□□□ -0.68
SFSWAP-201ENST00000261674 F8P00451 2351 aa10.81□□□□□ -0.68
SFSWAP-201ENST00000261674 IGHG2P01859 326 aa10.81□□□□□ -0.68
SFSWAP-201ENST00000261674 PMVKQ15126 192 aa10.81□□□□□ -0.68
SFSWAP-201ENST00000261674 PPP1R17O96001 155 aa10.8□□□□□ -0.68
SFSWAP-201ENST00000261674 RAX2Q96IS3 184 aa10.8□□□□□ -0.68
SFSWAP-201ENST00000261674 DLX4Q92988 240 aaPredicted RBP10.79□□□□□ -0.68
SFSWAP-201ENST00000261674 LGALS3P17931 250 aaKnown RBP10.79□□□□□ -0.68
SFSWAP-201ENST00000261674 TSPEAR-AS2P59090 65 aa10.79□□□□□ -0.68
SFSWAP-201ENST00000261674 LINC00315P59091 139 aa10.79□□□□□ -0.68
SFSWAP-201ENST00000261674 C19orf54Q5BKX5 351 aa10.79□□□□□ -0.68
SFSWAP-201ENST00000261674 ADARB2-AS1A8MUL3 147 aa10.79□□□□□ -0.68
SFSWAP-201ENST00000261674 TSPAN13O95857 204 aa10.79□□□□□ -0.68
SFSWAP-201ENST00000261674 PRM2P04554 102 aa10.79□□□□□ -0.68
SFSWAP-201ENST00000261674 KLK9Q2XQG4 91 aa10.79□□□□□ -0.68
SFSWAP-201ENST00000261674 BEX4Q9NWD9 120 aaPredicted RBP10.79□□□□□ -0.68
SFSWAP-201ENST00000261674 IGLV4-69A0A075B6H9 119 aa10.78□□□□□ -0.68
SFSWAP-201ENST00000261674 SYNJ2BPP57105 145 aa10.78□□□□□ -0.68
SFSWAP-201ENST00000261674 Q8N1Y9 231 aa10.78□□□□□ -0.68
SFSWAP-201ENST00000261674 ZNRF2Q8NHG8 242 aa10.78□□□□□ -0.68
SFSWAP-201ENST00000261674 TRAV2A0A0B4J234 112 aa10.78□□□□□ -0.68
SFSWAP-201ENST00000261674 RNASE13Q5GAN3 156 aaKnown RBP10.78□□□□□ -0.68
SFSWAP-201ENST00000261674 LINC01356Q8N9X3 169 aa10.78□□□□□ -0.68
SFSWAP-201ENST00000261674 A0A0J9YY99 117 aa10.77□□□□□ -0.68
SFSWAP-201ENST00000261674 IGHV4-31P0DP07 118 aa10.77□□□□□ -0.68
SFSWAP-201ENST00000261674 POLR2KP53803 58 aaKnown RBP10.77□□□□□ -0.68
SFSWAP-201ENST00000261674 ZNF876PQ49A33 203 aa10.77□□□□□ -0.68
SFSWAP-201ENST00000261674 SYT8Q8NBV8 401 aa10.77□□□□□ -0.68
SFSWAP-201ENST00000261674 KIF25-AS1Q9Y6Z4 181 aa10.77□□□□□ -0.68
SFSWAP-201ENST00000261674 IGIPA6NJ69 53 aa10.77□□□□□ -0.69
SFSWAP-201ENST00000261674 IGHV4-59P01825 116 aa10.77□□□□□ -0.69
SFSWAP-201ENST00000261674 KRTAP1-3Q8IUG1 177 aa10.77□□□□□ -0.69
SFSWAP-201ENST00000261674 A6NDX4 124 aa10.77□□□□□ -0.69
SFSWAP-201ENST00000261674 KNCNA6PVL3 124 aa10.77□□□□□ -0.69
SFSWAP-201ENST00000261674 J3QQQ9 107 aa10.76□□□□□ -0.69
SFSWAP-201ENST00000261674 DEFB112Q30KQ8 113 aa10.76□□□□□ -0.69
SFSWAP-201ENST00000261674 PRSS2P07478 247 aa10.76□□□□□ -0.69
SFSWAP-201ENST00000261674 Q1RN00 199 aa10.76□□□□□ -0.69
SFSWAP-201ENST00000261674 YAE1D1Q9NRH1 226 aa10.76□□□□□ -0.69
SFSWAP-201ENST00000261674 PRO0461Q9UI25 63 aa10.76□□□□□ -0.69
SFSWAP-201ENST00000261674 KLLNB2CW77 178 aa10.75□□□□□ -0.69
SFSWAP-201ENST00000261674 SNRPD3P62318 126 aaKnown RBP10.75□□□□□ -0.69
SFSWAP-201ENST00000261674 DCANP1Q8TF63 244 aa10.75□□□□□ -0.69
SFSWAP-201ENST00000261674 P0DMU3 169 aa10.75□□□□□ -0.69
SFSWAP-201ENST00000261674 FAM231AP0DMU4 169 aa10.75□□□□□ -0.69
SFSWAP-201ENST00000261674 FAM231CP0DMU5 169 aa10.75□□□□□ -0.69
SFSWAP-201ENST00000261674 SPXQ9BT56 116 aa10.75□□□□□ -0.69
SFSWAP-201ENST00000261674 A0A0J9YXV3 536 aa10.75□□□□□ -0.69
SFSWAP-201ENST00000261674 PAPPA-AS1Q5QFB9 102 aa10.75□□□□□ -0.69
SFSWAP-201ENST00000261674 NDUFA11Q86Y39 141 aa10.75□□□□□ -0.69
SFSWAP-201ENST00000261674 FAM19A4Q96LR4 140 aa10.75□□□□□ -0.69
SFSWAP-201ENST00000261674 ZNF580Q9UK33 172 aa10.75□□□□□ -0.69
SFSWAP-201ENST00000261674 MAST4O15021 2626 aa10.74□□□□□ -0.69
SFSWAP-201ENST00000261674 SMCPP49901 116 aaPredicted RBP10.74□□□□□ -0.69
SFSWAP-201ENST00000261674 CEMP1Q6PRD7 247 aaPredicted RBP10.74□□□□□ -0.69
SFSWAP-201ENST00000261674 IGHV4OR15-8A0A075B7B6 117 aa10.74□□□□□ -0.69
SFSWAP-201ENST00000261674 A0A087WW49 117 aa10.74□□□□□ -0.69
SFSWAP-201ENST00000261674 CFC1BP0CG36 223 aa10.74□□□□□ -0.69
SFSWAP-201ENST00000261674 CFC1P0CG37 223 aa10.74□□□□□ -0.69
SFSWAP-201ENST00000261674 MED14OSP0DP75 135 aa10.74□□□□□ -0.69
SFSWAP-201ENST00000261674 FOXI1Q12951 378 aa10.74□□□□□ -0.69
SFSWAP-201ENST00000261674 A0A096LNT2 108 aa10.73□□□□□ -0.69
SFSWAP-201ENST00000261674 TCL1BO95988 128 aa10.73□□□□□ -0.69
SFSWAP-201ENST00000261674 NFE4Q86UQ8 179 aa10.73□□□□□ -0.69
SFSWAP-201ENST00000261674 ATP6V0BQ99437 205 aa10.73□□□□□ -0.69
SFSWAP-201ENST00000261674 VCX2Q9H322 139 aa10.73□□□□□ -0.69
SFSWAP-201ENST00000261674 UBE2D1P51668 147 aa10.73□□□□□ -0.69
SFSWAP-201ENST00000261674 PROK1P58294 105 aa10.73□□□□□ -0.69
SFSWAP-201ENST00000261674 NPC2P61916 151 aa10.73□□□□□ -0.69
SFSWAP-201ENST00000261674 CR1P17927 2039 aa10.73□□□□□ -0.69
SFSWAP-201ENST00000261674 DSCR9P59020 149 aa10.73□□□□□ -0.69
SFSWAP-201ENST00000261674 IGHV3-16A0A0C4DH30 117 aa10.72□□□□□ -0.69
SFSWAP-201ENST00000261674 A4D1N5 150 aa10.72□□□□□ -0.69
SFSWAP-201ENST00000261674 CRIP2P52943 208 aaPredicted RBP10.72□□□□□ -0.69
SFSWAP-201ENST00000261674 CFAP126Q5VTH2 177 aa10.72□□□□□ -0.69
SFSWAP-201ENST00000261674 TMEM141Q96I45 108 aa10.72□□□□□ -0.69
SFSWAP-201ENST00000261674 IGHV1OR15-1A0A075B7D0 117 aa10.72□□□□□ -0.69
SFSWAP-201ENST00000261674 C11orf44Q8N8P7 122 aa10.72□□□□□ -0.69
SFSWAP-201ENST00000261674 M0QY20 66 aa10.71□□□□□ -0.69
SFSWAP-201ENST00000261674 IGLV1-40P01703 118 aa10.71□□□□□ -0.69
SFSWAP-201ENST00000261674 KHDC1LQ5JSQ8 128 aa10.71□□□□□ -0.69
SFSWAP-201ENST00000261674 PRO1854Q9UHT4 67 aa10.71□□□□□ -0.69
SFSWAP-201ENST00000261674 A0A0J9YX75 114 aa10.71□□□□□ -0.7
SFSWAP-201ENST00000261674 IGHV3-30P01768 117 aa10.71□□□□□ -0.7
SFSWAP-201ENST00000261674 IGHV3-30-5P0DP03 117 aa10.71□□□□□ -0.7
SFSWAP-201ENST00000261674 C1QTNF4Q9BXJ3 329 aa10.71□□□□□ -0.7
SFSWAP-201ENST00000261674 ATRQ13535 2644 aa10.71□□□□□ -0.7
SFSWAP-201ENST00000261674 TRBV27A0A0K0K1C4 114 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms