RNA–Protein interactions for RNA: ENST00000261407.8

LPCAT3-201, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT3, Length 2,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-201ENST00000261407 KHDC1LQ5JSQ8 128 aa14.15□□□□□ -0.14
LPCAT3-201ENST00000261407 RBMY1BA6NDE4 496 aaKnown RBP14.15□□□□□ -0.14
LPCAT3-201ENST00000261407 RBMY1EA6NEQ0 496 aaKnown RBP14.15□□□□□ -0.14
LPCAT3-201ENST00000261407 RBMY1DP0C7P1 496 aaKnown RBP14.15□□□□□ -0.14
LPCAT3-201ENST00000261407 FABP2P12104 132 aa14.15□□□□□ -0.14
LPCAT3-201ENST00000261407 SYT8Q8NBV8 401 aa14.15□□□□□ -0.14
LPCAT3-201ENST00000261407 SETD2Q9BYW2 2564 aaPredicted RBP14.14□□□□□ -0.15
LPCAT3-201ENST00000261407 P0DMU3 169 aa14.13□□□□□ -0.15
LPCAT3-201ENST00000261407 FAM231AP0DMU4 169 aa14.13□□□□□ -0.15
LPCAT3-201ENST00000261407 FAM231CP0DMU5 169 aa14.13□□□□□ -0.15
LPCAT3-201ENST00000261407 C12orf74Q32Q52 190 aa14.13□□□□□ -0.15
LPCAT3-201ENST00000261407 TMEM61Q8N0U2 210 aa14.13□□□□□ -0.15
LPCAT3-201ENST00000261407 ZNRF2Q8NHG8 242 aa14.13□□□□□ -0.15
LPCAT3-201ENST00000261407 TRBV6-5A0A0K0K1A5 114 aa14.13□□□□□ -0.15
LPCAT3-201ENST00000261407 ZNF815PA8K554 130 aa14.13□□□□□ -0.15
LPCAT3-201ENST00000261407 PMVKQ15126 192 aa14.13□□□□□ -0.15
LPCAT3-201ENST00000261407 KRTAP1-3Q8IUG1 177 aa14.12□□□□□ -0.15
LPCAT3-201ENST00000261407 Q9UF83 564 aa14.12□□□□□ -0.15
LPCAT3-201ENST00000261407 WNK1Q9H4A3 2382 aa14.12□□□□□ -0.15
LPCAT3-201ENST00000261407 RIPPLY3P57055 190 aa14.12□□□□□ -0.15
LPCAT3-201ENST00000261407 DLX4Q92988 240 aaPredicted RBP14.12□□□□□ -0.15
LPCAT3-201ENST00000261407 IGLL5B9A064 214 aa14.11□□□□□ -0.15
LPCAT3-201ENST00000261407 PCP4P48539 62 aa14.11□□□□□ -0.15
LPCAT3-201ENST00000261407 TAL2Q16559 108 aa14.11□□□□□ -0.15
LPCAT3-201ENST00000261407 TENM4Q6N022 2769 aa14.1□□□□□ -0.15
LPCAT3-201ENST00000261407 LINC01619G3V211 115 aa14.1□□□□□ -0.15
LPCAT3-201ENST00000261407 H3BMM0 161 aa14.1□□□□□ -0.15
LPCAT3-201ENST00000261407 TSPEAR-AS2P59090 65 aa14.1□□□□□ -0.15
LPCAT3-201ENST00000261407 FLNAP21333 2647 aaKnown RBP14.1□□□□□ -0.15
LPCAT3-201ENST00000261407 SCGB2A2Q13296 93 aa14.1□□□□□ -0.15
LPCAT3-201ENST00000261407 SCGB1D4Q6XE38 83 aa14.1□□□□□ -0.15
LPCAT3-201ENST00000261407 C11orf44Q8N8P7 122 aa14.1□□□□□ -0.15
LPCAT3-201ENST00000261407 TIMM17AQ99595 171 aa14.1□□□□□ -0.15
LPCAT3-201ENST00000261407 TMEM170BQ5T4T1 132 aa14.09□□□□□ -0.15
LPCAT3-201ENST00000261407 TRPT1Q86TN4 253 aaKnown RBP14.09□□□□□ -0.15
LPCAT3-201ENST00000261407 Q8N2B8 174 aa14.09□□□□□ -0.15
LPCAT3-201ENST00000261407 TMEM141Q96I45 108 aa14.09□□□□□ -0.15
LPCAT3-201ENST00000261407 HIST2H2BCQ6DN03 193 aa14.08□□□□□ -0.15
LPCAT3-201ENST00000261407 VPS25Q9BRG1 176 aa14.08□□□□□ -0.16
LPCAT3-201ENST00000261407 TRGV11A0A075B6L2 103 aa14.07□□□□□ -0.16
LPCAT3-201ENST00000261407 OR5A1Q8NGJ0 315 aa14.07□□□□□ -0.16
LPCAT3-201ENST00000261407 ZNF479Q96JC4 524 aa14.07□□□□□ -0.16
LPCAT3-201ENST00000261407 NSUN5P1Q3KNT7 163 aa14.06□□□□□ -0.16
LPCAT3-201ENST00000261407 Q6ZSN1 163 aa14.06□□□□□ -0.16
LPCAT3-201ENST00000261407 WFDC11Q8NEX6 87 aa14.06□□□□□ -0.16
LPCAT3-201ENST00000261407 C4orf3Q8WVX3 66 aa14.06□□□□□ -0.16
LPCAT3-201ENST00000261407 I3L3M4 83 aa14.05□□□□□ -0.16
LPCAT3-201ENST00000261407 C20orf203Q8NBC4 194 aa14.05□□□□□ -0.16
LPCAT3-201ENST00000261407 MAP6D1Q9H9H5 199 aa14.05□□□□□ -0.16
LPCAT3-201ENST00000261407 ACANP16112 2415 aa14.05□□□□□ -0.16
LPCAT3-201ENST00000261407 SPAG8Q99932 426 aaPredicted RBP14.04□□□□□ -0.16
LPCAT3-201ENST00000261407 NACAE9PAV3 2078 aa14.04□□□□□ -0.16
LPCAT3-201ENST00000261407 K7ERU9 68 aa14.04□□□□□ -0.16
LPCAT3-201ENST00000261407 SRSF9Q13242 221 aaKnown RBP eCLIP14.04□□□□□ -0.16
LPCAT3-201ENST00000261407 CEMP1Q6PRD7 247 aaPredicted RBP14.04□□□□□ -0.16
LPCAT3-201ENST00000261407 MTURNQ8N3F0 131 aa14.04□□□□□ -0.16
LPCAT3-201ENST00000261407 IGHV3-64A0A075B6Q5 118 aa14.03□□□□□ -0.16
LPCAT3-201ENST00000261407 H3BMG7 143 aa14.03□□□□□ -0.16
LPCAT3-201ENST00000261407 Q6ZSV7 163 aa14.03□□□□□ -0.16
LPCAT3-201ENST00000261407 A0A1W2PRX2 142 aa14.03□□□□□ -0.16
LPCAT3-201ENST00000261407 DEFB114Q30KQ6 69 aa14.03□□□□□ -0.16
LPCAT3-201ENST00000261407 LRRC75A-AS1Q8N1F1 130 aa14.03□□□□□ -0.16
LPCAT3-201ENST00000261407 PEMTQ9UBM1 199 aa14.03□□□□□ -0.16
LPCAT3-201ENST00000261407 A0A0J9YY99 117 aa14.02□□□□□ -0.16
LPCAT3-201ENST00000261407 A0A1B0GWB2 263 aa14.02□□□□□ -0.16
LPCAT3-201ENST00000261407 RHOHQ15669 191 aa14.02□□□□□ -0.16
LPCAT3-201ENST00000261407 DYNLRB2Q8TF09 96 aa14.02□□□□□ -0.16
LPCAT3-201ENST00000261407 LINC01549A6NIU2 74 aa14.02□□□□□ -0.17
LPCAT3-201ENST00000261407 A8MTW9 85 aa14.02□□□□□ -0.17
LPCAT3-201ENST00000261407 HERVK_113P61574 105 aa14.02□□□□□ -0.17
LPCAT3-201ENST00000261407 RRN3P1Q2M238 152 aa14.02□□□□□ -0.17
LPCAT3-201ENST00000261407 PAPPA-AS1Q5QFB9 102 aa14.02□□□□□ -0.17
LPCAT3-201ENST00000261407 SFTA2Q6UW10 78 aa14.02□□□□□ -0.17
LPCAT3-201ENST00000261407 FAM104AQ969W3 186 aa14.02□□□□□ -0.17
LPCAT3-201ENST00000261407 NOTCH3Q9UM47 2321 aa14.01□□□□□ -0.17
LPCAT3-201ENST00000261407 RNASE13Q5GAN3 156 aaKnown RBP14.01□□□□□ -0.17
LPCAT3-201ENST00000261407 AMELXQ99217 191 aa14.01□□□□□ -0.17
LPCAT3-201ENST00000261407 IGLV4-3A0A075B6K6 122 aa14.01□□□□□ -0.17
LPCAT3-201ENST00000261407 A0A0J9YXV3 536 aa14.01□□□□□ -0.17
LPCAT3-201ENST00000261407 LINC01587Q99440 93 aa14.01□□□□□ -0.17
LPCAT3-201ENST00000261407 CD28P10747 220 aa13.99□□□□□ -0.17
LPCAT3-201ENST00000261407 WFDC2Q14508 124 aa13.99□□□□□ -0.17
LPCAT3-201ENST00000261407 PGPEP1Q9NXJ5 209 aa13.99□□□□□ -0.17
LPCAT3-201ENST00000261407 MTORP42345 2549 aa13.99□□□□□ -0.17
LPCAT3-201ENST00000261407 G3V4G9 280 aa13.99□□□□□ -0.17
LPCAT3-201ENST00000261407 J3QQQ9 107 aa13.99□□□□□ -0.17
LPCAT3-201ENST00000261407 M0R2P5 195 aa13.99□□□□□ -0.17
LPCAT3-201ENST00000261407 RAX2Q96IS3 184 aa13.99□□□□□ -0.17
LPCAT3-201ENST00000261407 ESM1Q9NQ30 184 aa13.99□□□□□ -0.17
LPCAT3-201ENST00000261407 MRPL16Q9NX20 251 aaKnown RBP13.99□□□□□ -0.17
LPCAT3-201ENST00000261407 JMJD1CQ15652 2540 aa13.99□□□□□ -0.17
LPCAT3-201ENST00000261407 RPL24P83731 157 aaKnown RBP13.98□□□□□ -0.17
LPCAT3-201ENST00000261407 CFAP126Q5VTH2 177 aa13.98□□□□□ -0.17
LPCAT3-201ENST00000261407 NFE4Q86UQ8 179 aa13.98□□□□□ -0.17
LPCAT3-201ENST00000261407 C11orf72Q8NBR9 251 aa13.98□□□□□ -0.17
LPCAT3-201ENST00000261407 DNAJC9-AS1A6NH13 148 aa13.98□□□□□ -0.17
LPCAT3-201ENST00000261407 APOMO95445 188 aa13.98□□□□□ -0.17
LPCAT3-201ENST00000261407 AZU1P20160 251 aa13.98□□□□□ -0.17
LPCAT3-201ENST00000261407 XCL2Q9UBD3 114 aa13.98□□□□□ -0.17
LPCAT3-201ENST00000261407 SETXQ7Z333 2677 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms