RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 Q6ZWC4 215 aa4.06□□□□□ -1.76
TOPBP1-201ENST00000260810 PGLYRP4Q96LB8 373 aa4.06□□□□□ -1.76
TOPBP1-201ENST00000260810 RCHY1Q96PM5 261 aa4.06□□□□□ -1.76
TOPBP1-201ENST00000260810 AURKAIP1Q9NWT8 199 aaPredicted RBP4.06□□□□□ -1.76
TOPBP1-201ENST00000260810 PSCAO43653 123 aa4.06□□□□□ -1.76
TOPBP1-201ENST00000260810 RNASE4P34096 147 aaKnown RBP4.06□□□□□ -1.76
TOPBP1-201ENST00000260810 LINC01551Q86U37 167 aa4.06□□□□□ -1.76
TOPBP1-201ENST00000260810 TM2D2Q9BX73 214 aa4.06□□□□□ -1.76
TOPBP1-201ENST00000260810 PSG8Q9UQ74 426 aa4.06□□□□□ -1.76
TOPBP1-201ENST00000260810 LGALS1P09382 135 aaKnown RBP4.05□□□□□ -1.76
TOPBP1-201ENST00000260810 LAGE3Q14657 143 aa4.05□□□□□ -1.76
TOPBP1-201ENST00000260810 ERCC8Q13216 396 aa4.05□□□□□ -1.76
TOPBP1-201ENST00000260810 ZNF493Q6ZR52 646 aa4.05□□□□□ -1.76
TOPBP1-201ENST00000260810 PARLQ9H300 379 aa4.05□□□□□ -1.76
TOPBP1-201ENST00000260810 A0A087WX48 190 aa4.05□□□□□ -1.76
TOPBP1-201ENST00000260810 RNASE3P12724 160 aaKnown RBP4.05□□□□□ -1.76
TOPBP1-201ENST00000260810 TFPI2P48307 235 aa4.05□□□□□ -1.76
TOPBP1-201ENST00000260810 DLX4Q92988 240 aaPredicted RBP4.05□□□□□ -1.76
TOPBP1-201ENST00000260810 TRBV7-9A0A0J9YWB2 115 aa4.05□□□□□ -1.76
TOPBP1-201ENST00000260810 GAGE10A6NGK3 116 aa4.05□□□□□ -1.76
TOPBP1-201ENST00000260810 CCL25O15444 150 aa4.05□□□□□ -1.76
TOPBP1-201ENST00000260810 GNG5P63218 68 aa4.05□□□□□ -1.76
TOPBP1-201ENST00000260810 SPATA45Q537H7 98 aa4.05□□□□□ -1.76
TOPBP1-201ENST00000260810 TEX43Q6ZNM6 134 aa4.05□□□□□ -1.76
TOPBP1-201ENST00000260810 C11orf44Q8N8P7 122 aa4.05□□□□□ -1.76
TOPBP1-201ENST00000260810 WFDC12Q8WWY7 111 aa4.05□□□□□ -1.76
TOPBP1-201ENST00000260810 RNF185Q96GF1 192 aa4.05□□□□□ -1.76
TOPBP1-201ENST00000260810 MRPL16Q9NX20 251 aaKnown RBP4.05□□□□□ -1.76
TOPBP1-201ENST00000260810 SCO2A0A1W2PP80 73 aa4.04□□□□□ -1.76
TOPBP1-201ENST00000260810 CD5LO43866 347 aa4.04□□□□□ -1.76
TOPBP1-201ENST00000260810 CD7P09564 240 aa4.04□□□□□ -1.76
TOPBP1-201ENST00000260810 H3BRN7 92 aa4.04□□□□□ -1.76
TOPBP1-201ENST00000260810 NCR2O95944 276 aa4.04□□□□□ -1.76
TOPBP1-201ENST00000260810 PSG3Q16557 428 aa4.04□□□□□ -1.76
TOPBP1-201ENST00000260810 C16orf95Q9H693 158 aa4.04□□□□□ -1.76
TOPBP1-201ENST00000260810 COX11Q9Y6N1 276 aa4.04□□□□□ -1.76
TOPBP1-201ENST00000260810 LEPROTO15243 131 aa4.04□□□□□ -1.76
TOPBP1-201ENST00000260810 LINC00694P0DN24 101 aa4.04□□□□□ -1.76
TOPBP1-201ENST00000260810 HILS1P60008 231 aa4.04□□□□□ -1.76
TOPBP1-201ENST00000260810 FOXI2Q6ZQN5 318 aa4.04□□□□□ -1.76
TOPBP1-201ENST00000260810 NDUFAF3Q9BU61 184 aa4.04□□□□□ -1.76
TOPBP1-201ENST00000260810 LOC102724200A0A096LPH7 203 aaPredicted RBP4.04□□□□□ -1.76
TOPBP1-201ENST00000260810 HTN1P15515 57 aa4.04□□□□□ -1.76
TOPBP1-201ENST00000260810 Q8N3U1 123 aa4.04□□□□□ -1.76
TOPBP1-201ENST00000260810 ZC2HC1AQ96GY0 325 aa4.04□□□□□ -1.76
TOPBP1-201ENST00000260810 SHANK2-AS3Q9BTD1 123 aa4.04□□□□□ -1.76
TOPBP1-201ENST00000260810 SCRT2Q9NQ03 307 aa4.04□□□□□ -1.76
TOPBP1-201ENST00000260810 IGHV3OR16-12A0A075B7B8 117 aa4.03□□□□□ -1.76
TOPBP1-201ENST00000260810 A0A1B0GWB2 263 aa4.03□□□□□ -1.76
TOPBP1-201ENST00000260810 ZNF98A6NK75 572 aa4.03□□□□□ -1.76
TOPBP1-201ENST00000260810 OR13C6PQ8NH95 151 aa4.03□□□□□ -1.76
TOPBP1-201ENST00000260810 C8orf49Q96NF6 230 aa4.03□□□□□ -1.76
TOPBP1-201ENST00000260810 PGPEP1Q9NXJ5 209 aa4.03□□□□□ -1.76
TOPBP1-201ENST00000260810 PAM16Q9Y3D7 125 aa4.03□□□□□ -1.76
TOPBP1-201ENST00000260810 TRBV25-1A0A075B6N4 114 aa4.03□□□□□ -1.76
TOPBP1-201ENST00000260810 TRAV2A0A0B4J234 112 aa4.03□□□□□ -1.76
TOPBP1-201ENST00000260810 LINC00518Q8N0U6 118 aa4.03□□□□□ -1.76
TOPBP1-201ENST00000260810 OCC1Q8TAD7 63 aa4.03□□□□□ -1.76
TOPBP1-201ENST00000260810 GRIFINA4D1Z8 144 aa4.03□□□□□ -1.76
TOPBP1-201ENST00000260810 AZU1P20160 251 aa4.03□□□□□ -1.76
TOPBP1-201ENST00000260810 C10orf126Q8N4M7 172 aa4.03□□□□□ -1.76
TOPBP1-201ENST00000260810 SLURP1P55000 103 aa4.03□□□□□ -1.76
TOPBP1-201ENST00000260810 HSD52Q0P140 79 aa4.03□□□□□ -1.76
TOPBP1-201ENST00000260810 Q8NDZ9 215 aa4.03□□□□□ -1.76
TOPBP1-201ENST00000260810 VPREB3Q9UKI3 123 aa4.03□□□□□ -1.76
TOPBP1-201ENST00000260810 A8MWP6 167 aa4.03□□□□□ -1.77
TOPBP1-201ENST00000260810 IGKCP01834 107 aa4.03□□□□□ -1.77
TOPBP1-201ENST00000260810 CXCL5P42830 114 aa4.03□□□□□ -1.77
TOPBP1-201ENST00000260810 DAD1P61803 113 aa4.03□□□□□ -1.77
TOPBP1-201ENST00000260810 TSHBP01222 138 aa4.02□□□□□ -1.77
TOPBP1-201ENST00000260810 RHOHQ15669 191 aa4.02□□□□□ -1.77
TOPBP1-201ENST00000260810 TMEM170BQ5T4T1 132 aa4.02□□□□□ -1.77
TOPBP1-201ENST00000260810 KLHL30-AS1Q8NEE0 82 aa4.02□□□□□ -1.77
TOPBP1-201ENST00000260810 KIR2DL5BQ8NHK3 375 aa4.02□□□□□ -1.77
TOPBP1-201ENST00000260810 SPAG8Q99932 426 aaPredicted RBP4.02□□□□□ -1.77
TOPBP1-201ENST00000260810 CHCHD5Q9BSY4 110 aa4.02□□□□□ -1.77
TOPBP1-201ENST00000260810 HERV-K104P63124 156 aa4.02□□□□□ -1.77
TOPBP1-201ENST00000260810 BEAN1Q3B7T3 259 aa4.02□□□□□ -1.77
TOPBP1-201ENST00000260810 TMEM88Q6PEY1 159 aa4.02□□□□□ -1.77
TOPBP1-201ENST00000260810 KRTAP7-1Q8IUC3 87 aa4.02□□□□□ -1.77
TOPBP1-201ENST00000260810 SSBP4Q9BWG4 385 aaPredicted RBP4.02□□□□□ -1.77
TOPBP1-201ENST00000260810 H3BVH4 76 aa4.02□□□□□ -1.77
TOPBP1-201ENST00000260810 CRLF1O75462 422 aa4.02□□□□□ -1.77
TOPBP1-201ENST00000260810 FAM74A4Q5TZK3 123 aa4.02□□□□□ -1.77
TOPBP1-201ENST00000260810 C1orf158Q8N1D5 194 aa4.02□□□□□ -1.77
TOPBP1-201ENST00000260810 C16orf74Q96GX8 76 aa4.02□□□□□ -1.77
TOPBP1-201ENST00000260810 JPT2Q9H910 190 aa4.02□□□□□ -1.77
TOPBP1-201ENST00000260810 K7EMT4 169 aa4.02□□□□□ -1.77
TOPBP1-201ENST00000260810 EVI2AP22794 236 aa4.02□□□□□ -1.77
TOPBP1-201ENST00000260810 RPL23P62829 140 aaKnown RBP4.02□□□□□ -1.77
TOPBP1-201ENST00000260810 TAL2Q16559 108 aa4.02□□□□□ -1.77
TOPBP1-201ENST00000260810 C15orf32Q32M92 178 aa4.02□□□□□ -1.77
TOPBP1-201ENST00000260810 NSUN5P1Q3KNT7 163 aa4.02□□□□□ -1.77
TOPBP1-201ENST00000260810 C20orf78Q9BR46 151 aa4.02□□□□□ -1.77
TOPBP1-201ENST00000260810 C18orf15Q96N68 181 aa4.01□□□□□ -1.77
TOPBP1-201ENST00000260810 TMSB15BA0A087X1C1 80 aa4.01□□□□□ -1.77
TOPBP1-201ENST00000260810 LOC389332A0A1B0GUA5 103 aa4.01□□□□□ -1.77
TOPBP1-201ENST00000260810 LTAP01374 205 aa4.01□□□□□ -1.77
TOPBP1-201ENST00000260810 RPL32P62910 135 aaKnown RBP4.01□□□□□ -1.77
TOPBP1-201ENST00000260810 FAM231DQ6ZW35 169 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms