RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 ZFHX2Q9C0A1 2572 aaPredicted RBP7.49□□□□□ -1.21
CTDSPL2-201ENST00000260327 BUB3O43684 328 aa7.48□□□□□ -1.21
CTDSPL2-201ENST00000260327 WI2-2373I1.2A0A1W2PRP0 233 aa7.48□□□□□ -1.21
CTDSPL2-201ENST00000260327 SPTSSBQ8NFR3 76 aa7.48□□□□□ -1.21
CTDSPL2-201ENST00000260327 TIMM17AQ99595 171 aa7.48□□□□□ -1.21
CTDSPL2-201ENST00000260327 A0A0J9YY99 117 aa7.48□□□□□ -1.21
CTDSPL2-201ENST00000260327 DAZ2Q13117 558 aaKnown RBP7.48□□□□□ -1.21
CTDSPL2-201ENST00000260327 DAZ4Q86SG3 579 aaKnown RBP7.48□□□□□ -1.21
CTDSPL2-201ENST00000260327 VSIG2Q96IQ7 327 aa7.48□□□□□ -1.21
CTDSPL2-201ENST00000260327 DAZ3Q9NR90 486 aaKnown RBP7.48□□□□□ -1.21
CTDSPL2-201ENST00000260327 MRPS12O15235 138 aaKnown RBP7.47□□□□□ -1.21
CTDSPL2-201ENST00000260327 APRG1Q8IVJ8 170 aa7.47□□□□□ -1.21
CTDSPL2-201ENST00000260327 NREPQ16612 68 aa7.47□□□□□ -1.21
CTDSPL2-201ENST00000260327 UPK3BQ9BT76 320 aa7.47□□□□□ -1.21
CTDSPL2-201ENST00000260327 NPBQ8NG41 125 aa7.47□□□□□ -1.21
CTDSPL2-201ENST00000260327 FAM236DA0A1B0GTK5 79 aa7.47□□□□□ -1.21
CTDSPL2-201ENST00000260327 FAM236CP0DP71 79 aa7.47□□□□□ -1.21
CTDSPL2-201ENST00000260327 SEM1Q6ZVN7 128 aa7.47□□□□□ -1.21
CTDSPL2-201ENST00000260327 MIR7-3HGQ8N6C7 128 aa7.47□□□□□ -1.21
CTDSPL2-201ENST00000260327 IGHV1-58A0A0C4DH39 117 aa7.47□□□□□ -1.21
CTDSPL2-201ENST00000260327 A0A0J9YXY3 114 aa7.47□□□□□ -1.21
CTDSPL2-201ENST00000260327 A0A1W2PNU3 283 aaPredicted RBP7.47□□□□□ -1.21
CTDSPL2-201ENST00000260327 M0QXV9 152 aa7.47□□□□□ -1.21
CTDSPL2-201ENST00000260327 WFDC11Q8NEX6 87 aa7.46□□□□□ -1.21
CTDSPL2-201ENST00000260327 SPG11Q96JI7 2443 aa7.46□□□□□ -1.22
CTDSPL2-201ENST00000260327 CENPVL3A0A0U1RRI6 287 aa7.46□□□□□ -1.22
CTDSPL2-201ENST00000260327 TRBV12-3P01733 135 aa7.46□□□□□ -1.22
CTDSPL2-201ENST00000260327 C16orf54Q6UWD8 224 aa7.46□□□□□ -1.22
CTDSPL2-201ENST00000260327 MIAQ16674 131 aa7.46□□□□□ -1.22
CTDSPL2-201ENST00000260327 NDUFA7O95182 113 aa7.45□□□□□ -1.22
CTDSPL2-201ENST00000260327 DEFB136Q30KP8 78 aa7.45□□□□□ -1.22
CTDSPL2-201ENST00000260327 BDP1A6H8Y1 2624 aa7.45□□□□□ -1.22
CTDSPL2-201ENST00000260327 TRIAP1O43715 76 aa7.45□□□□□ -1.22
CTDSPL2-201ENST00000260327 JMJD7-PLA2G4BH0Y9G9 81 aa7.45□□□□□ -1.22
CTDSPL2-201ENST00000260327 FUSP35637 526 aaKnown RBP eCLIP7.45□□□□□ -1.22
CTDSPL2-201ENST00000260327 BLCAPP62952 87 aa7.44□□□□□ -1.22
CTDSPL2-201ENST00000260327 COL4A4P53420 1690 aaPredicted RBP7.44□□□□□ -1.22
CTDSPL2-201ENST00000260327 LINC00694P0DN24 101 aa7.44□□□□□ -1.22
CTDSPL2-201ENST00000260327 C9orf47Q6ZRZ4 202 aa7.44□□□□□ -1.22
CTDSPL2-201ENST00000260327 Q8N9W7 124 aa7.44□□□□□ -1.22
CTDSPL2-201ENST00000260327 V9GYY9 64 aa7.44□□□□□ -1.22
CTDSPL2-201ENST00000260327 IGLV1-47P01700 117 aa7.44□□□□□ -1.22
CTDSPL2-201ENST00000260327 SLPIP03973 132 aa7.44□□□□□ -1.22
CTDSPL2-201ENST00000260327 EIF4EBP1Q13541 118 aaPredicted RBP7.44□□□□□ -1.22
CTDSPL2-201ENST00000260327 MLST8Q9BVC4 326 aa7.44□□□□□ -1.22
CTDSPL2-201ENST00000260327 ENHOQ6UWT2 76 aa7.44□□□□□ -1.22
CTDSPL2-201ENST00000260327 SCXQ7RTU7 201 aa7.44□□□□□ -1.22
CTDSPL2-201ENST00000260327 NEXN-AS1Q8NBZ9 246 aa7.44□□□□□ -1.22
CTDSPL2-201ENST00000260327 AJUBAQ96IF1 538 aa7.44□□□□□ -1.22
CTDSPL2-201ENST00000260327 IGFL2Q6UWQ7 119 aa7.44□□□□□ -1.22
CTDSPL2-201ENST00000260327 MDFICQ9P1T7 246 aa7.44□□□□□ -1.22
CTDSPL2-201ENST00000260327 TRBV6-1A0A0K0K1D8 114 aa7.43□□□□□ -1.22
CTDSPL2-201ENST00000260327 K7EQD1 137 aa7.43□□□□□ -1.22
CTDSPL2-201ENST00000260327 CFAP126Q5VTH2 177 aa7.43□□□□□ -1.22
CTDSPL2-201ENST00000260327 P0DMU3 169 aa7.43□□□□□ -1.22
CTDSPL2-201ENST00000260327 FAM231AP0DMU4 169 aa7.43□□□□□ -1.22
CTDSPL2-201ENST00000260327 FAM231CP0DMU5 169 aa7.43□□□□□ -1.22
CTDSPL2-201ENST00000260327 LINC00310P59036 64 aa7.43□□□□□ -1.22
CTDSPL2-201ENST00000260327 CENPFP49454 3210 aa7.43□□□□□ -1.22
CTDSPL2-201ENST00000260327 IGHV4-59P01825 116 aa7.43□□□□□ -1.22
CTDSPL2-201ENST00000260327 MP68P56378 58 aa7.43□□□□□ -1.22
CTDSPL2-201ENST00000260327 C20orf203Q8NBC4 194 aa7.43□□□□□ -1.22
CTDSPL2-201ENST00000260327 UBE2BP63146 152 aa7.43□□□□□ -1.22
CTDSPL2-201ENST00000260327 WNK1Q9H4A3 2382 aa7.43□□□□□ -1.22
CTDSPL2-201ENST00000260327 PTPRQQ9UMZ3 2332 aa7.43□□□□□ -1.22
CTDSPL2-201ENST00000260327 COX7A2LO14548 114 aa7.43□□□□□ -1.22
CTDSPL2-201ENST00000260327 Q8N7P7 452 aa7.42□□□□□ -1.22
CTDSPL2-201ENST00000260327 IGHV4-38-2P0DP08 117 aa7.42□□□□□ -1.22
CTDSPL2-201ENST00000260327 Q8N976 141 aa7.42□□□□□ -1.22
CTDSPL2-201ENST00000260327 FANCD2OSQ96PS1 177 aa7.42□□□□□ -1.22
CTDSPL2-201ENST00000260327 FAM110AQ9BQ89 295 aa7.42□□□□□ -1.22
CTDSPL2-201ENST00000260327 TTC28Q96AY4 2481 aa7.42□□□□□ -1.22
CTDSPL2-201ENST00000260327 MRPL55Q7Z7F7 128 aaKnown RBP7.41□□□□□ -1.22
CTDSPL2-201ENST00000260327 PIP4P1Q86T03 277 aa7.41□□□□□ -1.22
CTDSPL2-201ENST00000260327 TMEM256-PLSCR3K7ERE1 68 aa7.41□□□□□ -1.22
CTDSPL2-201ENST00000260327 GATA3P23771 443 aa7.41□□□□□ -1.22
CTDSPL2-201ENST00000260327 DEFB112Q30KQ8 113 aa7.41□□□□□ -1.22
CTDSPL2-201ENST00000260327 LTBP2Q14767 1821 aa7.41□□□□□ -1.22
CTDSPL2-201ENST00000260327 ESM1Q9NQ30 184 aa7.41□□□□□ -1.22
CTDSPL2-201ENST00000260327 CRIP1P50238 77 aa7.41□□□□□ -1.22
CTDSPL2-201ENST00000260327 IGHV3-33P01772 117 aa7.41□□□□□ -1.22
CTDSPL2-201ENST00000260327 RPL18AQ02543 176 aaKnown RBP7.41□□□□□ -1.22
CTDSPL2-201ENST00000260327 SLURP1P55000 103 aa7.4□□□□□ -1.22
CTDSPL2-201ENST00000260327 SPRY4Q9C004 299 aa7.4□□□□□ -1.22
CTDSPL2-201ENST00000260327 SNURFQ9Y675 71 aa7.4□□□□□ -1.22
CTDSPL2-201ENST00000260327 FAM208BQ5VWN6 2430 aa7.4□□□□□ -1.22
CTDSPL2-201ENST00000260327 IGKV2D-24A0A075B6R9 120 aa7.4□□□□□ -1.22
CTDSPL2-201ENST00000260327 CHKB-CPT1BH3BT56 60 aa7.4□□□□□ -1.22
CTDSPL2-201ENST00000260327 ZFP36P26651 326 aaKnown RBP7.4□□□□□ -1.22
CTDSPL2-201ENST00000260327 HRCT1Q6UXD1 115 aa7.4□□□□□ -1.22
CTDSPL2-201ENST00000260327 NDUFC2-KCTD14E9PQ53 114 aa7.4□□□□□ -1.23
CTDSPL2-201ENST00000260327 GYPEP15421 78 aa7.4□□□□□ -1.23
CTDSPL2-201ENST00000260327 UNQ9165/PRO28630Q6UXU0 137 aa7.4□□□□□ -1.23
CTDSPL2-201ENST00000260327 ETDCA0A1B0GVM5 59 aa7.39□□□□□ -1.23
CTDSPL2-201ENST00000260327 HIST2H2BDQ6DRA6 164 aa7.39□□□□□ -1.23
CTDSPL2-201ENST00000260327 C5orf56Q8N8D9 126 aa7.39□□□□□ -1.23
CTDSPL2-201ENST00000260327 H3BUA1 57 aa7.39□□□□□ -1.23
CTDSPL2-201ENST00000260327 HIGD2BQ4VC39 106 aa7.39□□□□□ -1.23
CTDSPL2-201ENST00000260327 ATG2AQ2TAZ0 1938 aa7.39□□□□□ -1.23
CTDSPL2-201ENST00000260327 TRBV7-3A0A075B6L6 115 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms