RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 Q8N1Y9 231 aa3.06□□□□□ -1.92
RNF38-201ENST00000259605 HIST3H2BBQ8N257 126 aa3.06□□□□□ -1.92
RNF38-201ENST00000259605 ZNF702PQ9H963 129 aa3.06□□□□□ -1.92
RNF38-201ENST00000259605 NACAE9PAV3 2078 aa3.06□□□□□ -1.92
RNF38-201ENST00000259605 NCOR2Q9Y618 2525 aa3.06□□□□□ -1.92
RNF38-201ENST00000259605 COL4A6Q14031 1691 aa3.06□□□□□ -1.92
RNF38-201ENST00000259605 J3QQQ9 107 aa3.05□□□□□ -1.92
RNF38-201ENST00000259605 IGLV1-47P01700 117 aa3.05□□□□□ -1.92
RNF38-201ENST00000259605 IGLV2-8P01709 118 aa3.05□□□□□ -1.92
RNF38-201ENST00000259605 LGALS9CQ6DKI2 356 aa3.05□□□□□ -1.92
RNF38-201ENST00000259605 DEFB104AQ8WTQ1 72 aa3.05□□□□□ -1.92
RNF38-201ENST00000259605 SMR3AQ99954 134 aa3.05□□□□□ -1.92
RNF38-201ENST00000259605 PRR15LQ9BU68 103 aa3.05□□□□□ -1.92
RNF38-201ENST00000259605 PLXNA3P51805 1871 aa3.05□□□□□ -1.92
RNF38-201ENST00000259605 SCN5AQ14524 2016 aa3.05□□□□□ -1.92
RNF38-201ENST00000259605 NCR3O14931 201 aa3.05□□□□□ -1.92
RNF38-201ENST00000259605 GNRH2O43555 120 aa3.05□□□□□ -1.92
RNF38-201ENST00000259605 CXCL1P09341 107 aa3.05□□□□□ -1.92
RNF38-201ENST00000259605 BAALC-AS2P0C853 105 aa3.05□□□□□ -1.92
RNF38-201ENST00000259605 MRGPRG-AS1Q2M3A8 158 aa3.05□□□□□ -1.92
RNF38-201ENST00000259605 C10orf91Q5T1B1 145 aa3.05□□□□□ -1.92
RNF38-201ENST00000259605 ANKHD1Q8IWZ3 2542 aaKnown RBP3.05□□□□□ -1.92
RNF38-201ENST00000259605 DOCK5Q9H7D0 1870 aa3.05□□□□□ -1.92
RNF38-201ENST00000259605 TRBV6-1A0A0K0K1D8 114 aa3.05□□□□□ -1.92
RNF38-201ENST00000259605 K7EQG2 157 aa3.05□□□□□ -1.92
RNF38-201ENST00000259605 NUP214P35658 2090 aaPredicted RBP3.05□□□□□ -1.92
RNF38-201ENST00000259605 FREM1Q5H8C1 2179 aa3.05□□□□□ -1.92
RNF38-201ENST00000259605 CKAP5Q14008 2032 aa3.05□□□□□ -1.92
RNF38-201ENST00000259605 ATOH7Q8N100 152 aa3.05□□□□□ -1.92
RNF38-201ENST00000259605 F8VRH5 84 aa3.04□□□□□ -1.92
RNF38-201ENST00000259605 PSMB8P28062 276 aa3.04□□□□□ -1.92
RNF38-201ENST00000259605 C11orf71Q6IPW1 123 aa3.04□□□□□ -1.92
RNF38-201ENST00000259605 Q6Q795 121 aa3.04□□□□□ -1.92
RNF38-201ENST00000259605 NTN5Q8WTR8 489 aaPredicted RBP3.04□□□□□ -1.92
RNF38-201ENST00000259605 RBBP6Q7Z6E9 1792 aaKnown RBP3.04□□□□□ -1.92
RNF38-201ENST00000259605 Q6ZVQ6 151 aa3.04□□□□□ -1.92
RNF38-201ENST00000259605 NUP35Q8NFH5 326 aa3.04□□□□□ -1.92
RNF38-201ENST00000259605 DCANP1Q8TF63 244 aa3.04□□□□□ -1.92
RNF38-201ENST00000259605 MRPL35Q9NZE8 188 aaKnown RBP3.04□□□□□ -1.92
RNF38-201ENST00000259605 PLA2G2EQ9NZK7 142 aa3.04□□□□□ -1.92
RNF38-201ENST00000259605 XGP55808 180 aa3.04□□□□□ -1.92
RNF38-201ENST00000259605 Q6ZSR3 168 aa3.04□□□□□ -1.92
RNF38-201ENST00000259605 ZFAND2AQ8N6M9 145 aa3.04□□□□□ -1.92
RNF38-201ENST00000259605 MDFIQ99750 246 aa3.04□□□□□ -1.92
RNF38-201ENST00000259605 MED12Q93074 2177 aa3.04□□□□□ -1.92
RNF38-201ENST00000259605 TICRRQ7Z2Z1 1910 aa3.04□□□□□ -1.92
RNF38-201ENST00000259605 MED13LQ71F56 2210 aa3.04□□□□□ -1.92
RNF38-201ENST00000259605 A0A087X0K7 114 aa3.04□□□□□ -1.92
RNF38-201ENST00000259605 C1orf137Q5JT78 98 aa3.04□□□□□ -1.92
RNF38-201ENST00000259605 Q6ZTI0 123 aa3.04□□□□□ -1.92
RNF38-201ENST00000259605 WFDC9Q8NEX5 89 aa3.04□□□□□ -1.92
RNF38-201ENST00000259605 HIST1H2BLQ99880 126 aa3.04□□□□□ -1.92
RNF38-201ENST00000259605 LST1O00453 97 aa3.03□□□□□ -1.92
RNF38-201ENST00000259605 SNAI2O43623 268 aa3.03□□□□□ -1.92
RNF38-201ENST00000259605 IGLV2-11P01706 119 aa3.03□□□□□ -1.92
RNF38-201ENST00000259605 MLANAQ16655 118 aa3.03□□□□□ -1.92
RNF38-201ENST00000259605 LHFPL1Q86WI0 220 aa3.03□□□□□ -1.92
RNF38-201ENST00000259605 DOCK8Q8NF50 2099 aa3.03□□□□□ -1.92
RNF38-201ENST00000259605 FN1P02751 2386 aaKnown RBP3.03□□□□□ -1.92
RNF38-201ENST00000259605 I3L2K1 104 aa3.03□□□□□ -1.92
RNF38-201ENST00000259605 K7EIM0 57 aa3.03□□□□□ -1.92
RNF38-201ENST00000259605 CDPF1Q6NVV7 123 aa3.03□□□□□ -1.92
RNF38-201ENST00000259605 FAM231DQ6ZW35 169 aa3.03□□□□□ -1.92
RNF38-201ENST00000259605 SMIM20Q8N5G0 67 aa3.03□□□□□ -1.92
RNF38-201ENST00000259605 ZNF524Q96C55 264 aa3.03□□□□□ -1.92
RNF38-201ENST00000259605 SMKR1H3BMG3 65 aa3.03□□□□□ -1.92
RNF38-201ENST00000259605 H3BUT2 72 aa3.03□□□□□ -1.92
RNF38-201ENST00000259605 SPANXCQ9NY87 97 aa3.03□□□□□ -1.92
RNF38-201ENST00000259605 COL11A1P12107 1806 aaPredicted RBP3.03□□□□□ -1.92
RNF38-201ENST00000259605 TRBV6-8A0A0A6YYG3 113 aa3.03□□□□□ -1.92
RNF38-201ENST00000259605 TMEM213A2RRL7 107 aa3.03□□□□□ -1.92
RNF38-201ENST00000259605 TMEM256-PLSCR3K7ERE1 68 aa3.03□□□□□ -1.92
RNF38-201ENST00000259605 M0R378 163 aa3.03□□□□□ -1.92
RNF38-201ENST00000259605 LECT2O14960 151 aa3.03□□□□□ -1.92
RNF38-201ENST00000259605 CIRBP-AS1Q8TBR5 109 aa3.03□□□□□ -1.92
RNF38-201ENST00000259605 ZNF646O15015 1829 aaPredicted RBP3.03□□□□□ -1.93
RNF38-201ENST00000259605 C2CD3Q4AC94 2353 aa3.03□□□□□ -1.93
RNF38-201ENST00000259605 TRAV12-1A0A0B4J245 112 aa3.02□□□□□ -1.93
RNF38-201ENST00000259605 HIST1H2BKO60814 126 aa3.02□□□□□ -1.93
RNF38-201ENST00000259605 HIST1H2BJP06899 126 aa3.02□□□□□ -1.93
RNF38-201ENST00000259605 HIST1H2BOP23527 126 aa3.02□□□□□ -1.93
RNF38-201ENST00000259605 HIST1H2BBP33778 126 aa3.02□□□□□ -1.93
RNF38-201ENST00000259605 HIST1H2BDP58876 126 aa3.02□□□□□ -1.93
RNF38-201ENST00000259605 HIST1H2BCP62807 126 aa3.02□□□□□ -1.93
RNF38-201ENST00000259605 FHL3Q13643 280 aa3.02□□□□□ -1.93
RNF38-201ENST00000259605 HIST2H2BEQ16778 126 aa3.02□□□□□ -1.93
RNF38-201ENST00000259605 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.02□□□□□ -1.93
RNF38-201ENST00000259605 HIST1H2BHQ93079 126 aa3.02□□□□□ -1.93
RNF38-201ENST00000259605 HIST1H2BNQ99877 126 aa3.02□□□□□ -1.93
RNF38-201ENST00000259605 HIST1H2BMQ99879 126 aa3.02□□□□□ -1.93
RNF38-201ENST00000259605 ZFC3H1O60293 1989 aaKnown RBP3.02□□□□□ -1.93
RNF38-201ENST00000259605 C3orf79P0CE67 100 aa3.02□□□□□ -1.93
RNF38-201ENST00000259605 PRR4Q16378 134 aa3.02□□□□□ -1.93
RNF38-201ENST00000259605 MRPL51Q4U2R6 128 aaKnown RBP3.02□□□□□ -1.93
RNF38-201ENST00000259605 LINC01556Q5JQF7 62 aa3.02□□□□□ -1.93
RNF38-201ENST00000259605 C10orf25Q5T742 122 aa3.02□□□□□ -1.93
RNF38-201ENST00000259605 A0A1W2PNU3 283 aaPredicted RBP3.02□□□□□ -1.93
RNF38-201ENST00000259605 IGLV1-51P01701 117 aa3.02□□□□□ -1.93
RNF38-201ENST00000259605 IGLV3-1P01715 115 aa3.02□□□□□ -1.93
RNF38-201ENST00000259605 RALGAPA2Q2PPJ7 1873 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms