RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 TCTEX1D4Q5JR98 221 aa18.86■□□□□ 0.61
RAB40C-201ENST00000248139 ZNF702PQ9H963 129 aa18.86■□□□□ 0.61
RAB40C-201ENST00000248139 VPREB3Q9UKI3 123 aa18.86■□□□□ 0.61
RAB40C-201ENST00000248139 TRBV27A0A0K0K1C4 114 aa18.85■□□□□ 0.61
RAB40C-201ENST00000248139 NOTCH3Q9UM47 2321 aa18.85■□□□□ 0.61
RAB40C-201ENST00000248139 IGHV3-64A0A075B6Q5 118 aa18.84■□□□□ 0.61
RAB40C-201ENST00000248139 RRN3P1Q2M238 152 aa18.84■□□□□ 0.61
RAB40C-201ENST00000248139 AKAP9Q99996 3911 aa18.84■□□□□ 0.61
RAB40C-201ENST00000248139 SH2D6Q7Z4S9 175 aa18.84■□□□□ 0.61
RAB40C-201ENST00000248139 Q9UF83 564 aa18.84■□□□□ 0.61
RAB40C-201ENST00000248139 DSCR9P59020 149 aa18.83■□□□□ 0.61
RAB40C-201ENST00000248139 SYT8Q8NBV8 401 aa18.83■□□□□ 0.61
RAB40C-201ENST00000248139 PGPEP1Q9NXJ5 209 aa18.83■□□□□ 0.6
RAB40C-201ENST00000248139 APOMO95445 188 aa18.82■□□□□ 0.6
RAB40C-201ENST00000248139 DEFB131AP59861 70 aa18.82■□□□□ 0.6
RAB40C-201ENST00000248139 SAMD13Q5VXD3 122 aa18.82■□□□□ 0.6
RAB40C-201ENST00000248139 NIPBLQ6KC79 2804 aaeCLIP18.82■□□□□ 0.6
RAB40C-201ENST00000248139 LINC01549A6NIU2 74 aa18.81■□□□□ 0.6
RAB40C-201ENST00000248139 RPL32P62910 135 aaKnown RBP18.81■□□□□ 0.6
RAB40C-201ENST00000248139 PRRC2AP48634 2157 aaKnown RBP18.8■□□□□ 0.6
RAB40C-201ENST00000248139 CCDC168Q8NDH2 2452 aa18.8■□□□□ 0.6
RAB40C-201ENST00000248139 KHDC1LQ5JSQ8 128 aa18.79■□□□□ 0.6
RAB40C-201ENST00000248139 ODF3Q96PU9 254 aa18.79■□□□□ 0.6
RAB40C-201ENST00000248139 MRPL16Q9NX20 251 aaKnown RBP18.79■□□□□ 0.6
RAB40C-201ENST00000248139 NACAE9PAV3 2078 aa18.79■□□□□ 0.6
RAB40C-201ENST00000248139 TRBV6-5A0A0K0K1A5 114 aa18.79■□□□□ 0.6
RAB40C-201ENST00000248139 ETDBQ3ZM63 59 aa18.79■□□□□ 0.6
RAB40C-201ENST00000248139 Q6YL49 198 aa18.79■□□□□ 0.6
RAB40C-201ENST00000248139 BBC3Q96PG8 261 aaPredicted RBP18.79■□□□□ 0.6
RAB40C-201ENST00000248139 TIMM17AQ99595 171 aa18.79■□□□□ 0.6
RAB40C-201ENST00000248139 CR1P17927 2039 aa18.79■□□□□ 0.6
RAB40C-201ENST00000248139 A0A0J9YY99 117 aa18.78■□□□□ 0.6
RAB40C-201ENST00000248139 TMEM141Q96I45 108 aa18.78■□□□□ 0.6
RAB40C-201ENST00000248139 A0A1B0GWB2 263 aa18.78■□□□□ 0.6
RAB40C-201ENST00000248139 IGHV4-31P0DP07 118 aa18.78■□□□□ 0.6
RAB40C-201ENST00000248139 UBE2E2Q96LR5 201 aa18.78■□□□□ 0.6
RAB40C-201ENST00000248139 CEMP1Q6PRD7 247 aaPredicted RBP18.77■□□□□ 0.6
RAB40C-201ENST00000248139 UBR5O95071 2799 aaPredicted RBP18.77■□□□□ 0.59
RAB40C-201ENST00000248139 RBMY1BA6NDE4 496 aaKnown RBP18.77■□□□□ 0.59
RAB40C-201ENST00000248139 RBMY1EA6NEQ0 496 aaKnown RBP18.77■□□□□ 0.59
RAB40C-201ENST00000248139 ELANEP08246 267 aa18.77■□□□□ 0.59
RAB40C-201ENST00000248139 RBMY1DP0C7P1 496 aaKnown RBP18.77■□□□□ 0.59
RAB40C-201ENST00000248139 HERVK_113P61574 105 aa18.77■□□□□ 0.59
RAB40C-201ENST00000248139 TRPT1Q86TN4 253 aaKnown RBP18.77■□□□□ 0.59
RAB40C-201ENST00000248139 LINC01619G3V211 115 aa18.76■□□□□ 0.59
RAB40C-201ENST00000248139 COTL1Q14019 142 aa18.76■□□□□ 0.59
RAB40C-201ENST00000248139 RNASE13Q5GAN3 156 aaKnown RBP18.76■□□□□ 0.59
RAB40C-201ENST00000248139 TMEM89A2RUT3 159 aa18.76■□□□□ 0.59
RAB40C-201ENST00000248139 APCP25054 2843 aa18.75■□□□□ 0.59
RAB40C-201ENST00000248139 LOC107984156A0A0G2JMH3 177 aa18.74■□□□□ 0.59
RAB40C-201ENST00000248139 ARL17AQ8IVW1 177 aa18.74■□□□□ 0.59
RAB40C-201ENST00000248139 A0A0J9YXV3 536 aa18.74■□□□□ 0.59
RAB40C-201ENST00000248139 J3QLI3 93 aa18.74■□□□□ 0.59
RAB40C-201ENST00000248139 TMEM61Q8N0U2 210 aa18.74■□□□□ 0.59
RAB40C-201ENST00000248139 C20orf203Q8NBC4 194 aa18.73■□□□□ 0.59
RAB40C-201ENST00000248139 SPANXB1Q9NS25 103 aaPredicted RBP18.73■□□□□ 0.59
RAB40C-201ENST00000248139 GAGE13Q4V321 117 aa18.73■□□□□ 0.59
RAB40C-201ENST00000248139 J3QQQ9 107 aa18.72■□□□□ 0.59
RAB40C-201ENST00000248139 INSL3P51460 131 aa18.72■□□□□ 0.59
RAB40C-201ENST00000248139 PAPPA-AS1Q5QFB9 102 aa18.72■□□□□ 0.59
RAB40C-201ENST00000248139 TSPAN13O95857 204 aa18.72■□□□□ 0.59
RAB40C-201ENST00000248139 Q6ZSN1 163 aa18.72■□□□□ 0.59
RAB40C-201ENST00000248139 AMELXQ99217 191 aa18.72■□□□□ 0.59
RAB40C-201ENST00000248139 I3L3M4 83 aa18.71■□□□□ 0.59
RAB40C-201ENST00000248139 UBE2D1P51668 147 aa18.71■□□□□ 0.59
RAB40C-201ENST00000248139 F8W1H4 67 aa18.71■□□□□ 0.59
RAB40C-201ENST00000248139 NSUN5P1Q3KNT7 163 aa18.71■□□□□ 0.59
RAB40C-201ENST00000248139 C11orf44Q8N8P7 122 aa18.71■□□□□ 0.59
RAB40C-201ENST00000248139 FSHBP01225 129 aa18.7■□□□□ 0.58
RAB40C-201ENST00000248139 SPAG8Q99932 426 aaPredicted RBP18.7■□□□□ 0.58
RAB40C-201ENST00000248139 TRGV11A0A075B6L2 103 aa18.69■□□□□ 0.58
RAB40C-201ENST00000248139 H3BMM0 161 aa18.69■□□□□ 0.58
RAB40C-201ENST00000248139 PRO0461Q9UI25 63 aa18.69■□□□□ 0.58
RAB40C-201ENST00000248139 IGLV4-3A0A075B6K6 122 aa18.69■□□□□ 0.58
RAB40C-201ENST00000248139 ADARB2-AS1A8MUL3 147 aa18.69■□□□□ 0.58
RAB40C-201ENST00000248139 LGALS3P17931 250 aaKnown RBP18.69■□□□□ 0.58
RAB40C-201ENST00000248139 ITPR3Q14573 2671 aa18.69■□□□□ 0.58
RAB40C-201ENST00000248139 PSMB2P49721 201 aa18.68■□□□□ 0.58
RAB40C-201ENST00000248139 DLX4Q92988 240 aaPredicted RBP18.68■□□□□ 0.58
RAB40C-201ENST00000248139 TMEM238LA0A1B0GVL6 79 aa18.67■□□□□ 0.58
RAB40C-201ENST00000248139 A6NJY4 79 aa18.67■□□□□ 0.58
RAB40C-201ENST00000248139 IGHV3-30P01768 117 aa18.67■□□□□ 0.58
RAB40C-201ENST00000248139 IGHV3-30-5P0DP03 117 aa18.67■□□□□ 0.58
RAB40C-201ENST00000248139 RHOHQ15669 191 aa18.67■□□□□ 0.58
RAB40C-201ENST00000248139 Q5PR19 223 aa18.67■□□□□ 0.58
RAB40C-201ENST00000248139 JMJD1CQ15652 2540 aa18.67■□□□□ 0.58
RAB40C-201ENST00000248139 ZNF22P17026 224 aaPredicted RBP18.67■□□□□ 0.58
RAB40C-201ENST00000248139 VCX2Q9H322 139 aa18.67■□□□□ 0.58
RAB40C-201ENST00000248139 CFC1BP0CG36 223 aa18.67■□□□□ 0.58
RAB40C-201ENST00000248139 CFC1P0CG37 223 aa18.67■□□□□ 0.58
RAB40C-201ENST00000248139 NDUFA11Q86Y39 141 aa18.67■□□□□ 0.58
RAB40C-201ENST00000248139 C2CD3Q4AC94 2353 aa18.66■□□□□ 0.58
RAB40C-201ENST00000248139 SLC25A29Q8N8R3 303 aa18.66■□□□□ 0.58
RAB40C-201ENST00000248139 SPXQ9BT56 116 aa18.66■□□□□ 0.58
RAB40C-201ENST00000248139 IGHV3-38A0A0C4DH36 116 aa18.66■□□□□ 0.58
RAB40C-201ENST00000248139 TSSC4Q9Y5U2 329 aaPredicted RBP18.66■□□□□ 0.58
RAB40C-201ENST00000248139 TMEM223A0PJW6 202 aa18.65■□□□□ 0.58
RAB40C-201ENST00000248139 CD28P10747 220 aa18.65■□□□□ 0.58
RAB40C-201ENST00000248139 FAM104AQ969W3 186 aa18.65■□□□□ 0.58
RAB40C-201ENST00000248139 NFE4Q86UQ8 179 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms