RNA–Protein interactions for RNA: ENST00000243562.13

LTBP4-202, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 3,140 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-202ENST00000243562 CFAP126Q5VTH2 177 aa10.56□□□□□ -0.72
LTBP4-202ENST00000243562 C10orf99Q6UWK7 81 aa10.56□□□□□ -0.72
LTBP4-202ENST00000243562 IGHV3-16A0A0C4DH30 117 aa10.55□□□□□ -0.72
LTBP4-202ENST00000243562 TRBV27A0A0K0K1C4 114 aa10.55□□□□□ -0.72
LTBP4-202ENST00000243562 MSMBP08118 114 aa10.55□□□□□ -0.72
LTBP4-202ENST00000243562 SMCPP49901 116 aaPredicted RBP10.55□□□□□ -0.72
LTBP4-202ENST00000243562 H7C2G1 150 aa10.55□□□□□ -0.72
LTBP4-202ENST00000243562 ZNF876PQ49A33 203 aa10.55□□□□□ -0.72
LTBP4-202ENST00000243562 LGALS9O00182 355 aa10.54□□□□□ -0.72
LTBP4-202ENST00000243562 CFC1BP0CG36 223 aa10.54□□□□□ -0.72
LTBP4-202ENST00000243562 CFC1P0CG37 223 aa10.54□□□□□ -0.72
LTBP4-202ENST00000243562 DUX5Q96PT3 197 aa10.54□□□□□ -0.72
LTBP4-202ENST00000243562 SLC25A29Q8N8R3 303 aa10.54□□□□□ -0.72
LTBP4-202ENST00000243562 CDIP1Q9H305 208 aa10.54□□□□□ -0.72
LTBP4-202ENST00000243562 VCX2Q9H322 139 aa10.54□□□□□ -0.72
LTBP4-202ENST00000243562 IGHV3-30P01768 117 aa10.53□□□□□ -0.72
LTBP4-202ENST00000243562 IGHV3-30-5P0DP03 117 aa10.53□□□□□ -0.72
LTBP4-202ENST00000243562 XGP55808 180 aa10.53□□□□□ -0.72
LTBP4-202ENST00000243562 IGHV1OR15-1A0A075B7D0 117 aa10.53□□□□□ -0.72
LTBP4-202ENST00000243562 M0QY20 66 aa10.53□□□□□ -0.72
LTBP4-202ENST00000243562 AVPP01185 164 aa10.53□□□□□ -0.72
LTBP4-202ENST00000243562 VPS13CQ709C8 3753 aa10.53□□□□□ -0.72
LTBP4-202ENST00000243562 TRAV2A0A0B4J234 112 aa10.53□□□□□ -0.72
LTBP4-202ENST00000243562 TCL1BO95988 128 aa10.53□□□□□ -0.72
LTBP4-202ENST00000243562 Q6ZUT4 128 aa10.53□□□□□ -0.72
LTBP4-202ENST00000243562 PRO1854Q9UHT4 67 aa10.53□□□□□ -0.72
LTBP4-202ENST00000243562 IGHV3-73A0A0B4J1V6 119 aa10.52□□□□□ -0.72
LTBP4-202ENST00000243562 A0A0J9YX75 114 aa10.52□□□□□ -0.72
LTBP4-202ENST00000243562 SYNJ2BPP57105 145 aa10.52□□□□□ -0.72
LTBP4-202ENST00000243562 C5orf47Q569G3 176 aa10.52□□□□□ -0.72
LTBP4-202ENST00000243562 TRPT1Q86TN4 253 aaKnown RBP10.52□□□□□ -0.72
LTBP4-202ENST00000243562 NFE4Q86UQ8 179 aa10.52□□□□□ -0.72
LTBP4-202ENST00000243562 TRBV6-5A0A0K0K1A5 114 aa10.52□□□□□ -0.73
LTBP4-202ENST00000243562 CCDC179H3BU77 68 aa10.52□□□□□ -0.73
LTBP4-202ENST00000243562 IGHV4-59P01825 116 aa10.52□□□□□ -0.73
LTBP4-202ENST00000243562 UBE2D3P61077 147 aa10.52□□□□□ -0.73
LTBP4-202ENST00000243562 UBE2D2P62837 147 aa10.52□□□□□ -0.73
LTBP4-202ENST00000243562 C9orf85Q96MD7 179 aa10.52□□□□□ -0.73
LTBP4-202ENST00000243562 C10orf126Q8N4M7 172 aa10.51□□□□□ -0.73
LTBP4-202ENST00000243562 NHLRC4P0CG21 123 aaPredicted RBP10.51□□□□□ -0.73
LTBP4-202ENST00000243562 A0A0J9YXV3 536 aa10.51□□□□□ -0.73
LTBP4-202ENST00000243562 TRAV25A0A0B4J276 109 aa10.5□□□□□ -0.73
LTBP4-202ENST00000243562 GAGE12JA6NER3 117 aa10.5□□□□□ -0.73
LTBP4-202ENST00000243562 GAGE7O76087 117 aa10.5□□□□□ -0.73
LTBP4-202ENST00000243562 GAGE12FP0CL80 117 aa10.5□□□□□ -0.73
LTBP4-202ENST00000243562 GAGE12GP0CL81 117 aa10.5□□□□□ -0.73
LTBP4-202ENST00000243562 GAGE12IP0CL82 117 aa10.5□□□□□ -0.73
LTBP4-202ENST00000243562 GAGE4Q13068 117 aa10.5□□□□□ -0.73
LTBP4-202ENST00000243562 A8MWV9 139 aa10.5□□□□□ -0.73
LTBP4-202ENST00000243562 I3L3M4 83 aa10.5□□□□□ -0.73
LTBP4-202ENST00000243562 P0DMU3 169 aa10.5□□□□□ -0.73
LTBP4-202ENST00000243562 FAM231AP0DMU4 169 aa10.5□□□□□ -0.73
LTBP4-202ENST00000243562 FAM231CP0DMU5 169 aa10.5□□□□□ -0.73
LTBP4-202ENST00000243562 CFHR3Q02985 330 aa10.5□□□□□ -0.73
LTBP4-202ENST00000243562 TRBV20-1A0A075B6N2 111 aa10.49□□□□□ -0.73
LTBP4-202ENST00000243562 PSMB8P28062 276 aa10.49□□□□□ -0.73
LTBP4-202ENST00000243562 RHOHQ15669 191 aa10.49□□□□□ -0.73
LTBP4-202ENST00000243562 Q1RN00 199 aa10.49□□□□□ -0.73
LTBP4-202ENST00000243562 LEPROTO15243 131 aa10.49□□□□□ -0.73
LTBP4-202ENST00000243562 DEFB112Q30KQ8 113 aa10.49□□□□□ -0.73
LTBP4-202ENST00000243562 C20orf203Q8NBC4 194 aa10.49□□□□□ -0.73
LTBP4-202ENST00000243562 ATP6V0E2Q8NHE4 81 aa10.49□□□□□ -0.73
LTBP4-202ENST00000243562 B4DSR2 109 aa10.49□□□□□ -0.73
LTBP4-202ENST00000243562 K7EQG2 157 aa10.49□□□□□ -0.73
LTBP4-202ENST00000243562 TMEM223A0PJW6 202 aa10.48□□□□□ -0.73
LTBP4-202ENST00000243562 NSUN5P1Q3KNT7 163 aa10.48□□□□□ -0.73
LTBP4-202ENST00000243562 ZFAND6Q6FIF0 208 aa10.48□□□□□ -0.73
LTBP4-202ENST00000243562 ADARB2-AS1A8MUL3 147 aa10.48□□□□□ -0.73
LTBP4-202ENST00000243562 MUSTN1Q8IVN3 82 aa10.48□□□□□ -0.73
LTBP4-202ENST00000243562 PPDPFLQ8WWR9 84 aa10.48□□□□□ -0.73
LTBP4-202ENST00000243562 AMELXQ99217 191 aa10.48□□□□□ -0.73
LTBP4-202ENST00000243562 CSDC2Q9Y534 153 aaKnown RBP10.48□□□□□ -0.73
LTBP4-202ENST00000243562 RHODO00212 210 aa10.47□□□□□ -0.73
LTBP4-202ENST00000243562 ZNF22P17026 224 aaPredicted RBP10.47□□□□□ -0.73
LTBP4-202ENST00000243562 FHL3Q13643 280 aa10.47□□□□□ -0.73
LTBP4-202ENST00000243562 TEN1Q86WV5 123 aa10.47□□□□□ -0.73
LTBP4-202ENST00000243562 TEX29Q8N6K0 151 aa10.47□□□□□ -0.73
LTBP4-202ENST00000243562 PRSS2P07478 247 aa10.47□□□□□ -0.73
LTBP4-202ENST00000243562 ODF3Q96PU9 254 aa10.47□□□□□ -0.73
LTBP4-202ENST00000243562 ZNF580Q9UK33 172 aa10.47□□□□□ -0.73
LTBP4-202ENST00000243562 CD28P10747 220 aa10.47□□□□□ -0.73
LTBP4-202ENST00000243562 CARD19Q96LW7 228 aa10.47□□□□□ -0.73
LTBP4-202ENST00000243562 IGLV4-3A0A075B6K6 122 aa10.46□□□□□ -0.73
LTBP4-202ENST00000243562 KNCNA6PVL3 124 aa10.46□□□□□ -0.73
LTBP4-202ENST00000243562 RNASE13Q5GAN3 156 aaKnown RBP10.46□□□□□ -0.73
LTBP4-202ENST00000243562 NRGNQ92686 78 aa10.46□□□□□ -0.73
LTBP4-202ENST00000243562 BEX4Q9NWD9 120 aaPredicted RBP10.46□□□□□ -0.73
LTBP4-202ENST00000243562 TRGV11A0A075B6L2 103 aa10.46□□□□□ -0.74
LTBP4-202ENST00000243562 C9JAW5 83 aa10.46□□□□□ -0.74
LTBP4-202ENST00000243562 PROK1P58294 105 aa10.46□□□□□ -0.74
LTBP4-202ENST00000243562 CEMP1Q6PRD7 247 aaPredicted RBP10.46□□□□□ -0.74
LTBP4-202ENST00000243562 PRM2P04554 102 aa10.45□□□□□ -0.74
LTBP4-202ENST00000243562 MAPK1IP1LQ8NDC0 245 aa10.45□□□□□ -0.74
LTBP4-202ENST00000243562 ANKRD29Q8N6D5 301 aa10.44□□□□□ -0.74
LTBP4-202ENST00000243562 CRYBG3Q68DQ2 2970 aa10.44□□□□□ -0.74
LTBP4-202ENST00000243562 USP9YO00507 2555 aaPredicted RBP10.44□□□□□ -0.74
LTBP4-202ENST00000243562 IGHV3-33P01772 117 aa10.44□□□□□ -0.74
LTBP4-202ENST00000243562 SLC25A20O43772 301 aa10.43□□□□□ -0.74
LTBP4-202ENST00000243562 HOXD3P31249 432 aaPredicted RBP10.43□□□□□ -0.74
LTBP4-202ENST00000243562 TIMM21Q9BVV7 248 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms